抑制剂G4G与HIV-1蛋白酶作用模式的结合自由能计算研究

本文采用分子动力学模拟和结合自由能计算研究了抑制剂G4G与HIV-1蛋白酶的作用机制。研究结果表明范德华作用主导了抑制剂G4G与HIV-1蛋白酶的结合。基于残基的自由能计算表明残基Gly49、Ile50、Val82、Ile84、Gly27′、Ala28′、Ile50′和Ile84′与G4G产生了较强的相互作用,同时研究也表明CH-π,CH-O相互作用和氢键是其主要的作用形式。该研究能为以HIV-1蛋白酶为靶标的抗艾滋病药物设计提供理论上的指导。     

抑制剂G4G与HIV-1蛋白酶作用模式的结合自由能计算研究

本文采用分子动力学模拟和结合自由能计算研究了抑制剂G4G与HIV-1蛋白酶的作用机制。研究结果表明范德华作用主导了抑制剂G4G与HIV-1蛋白酶的结合。基于残基的自由能计算表明残基Gly49、Ile50、Val82、Ile84、Gly27′、Ala28′、Ile50′和Ile84′与G4G产生了较强的相互作用,同时研究也表明CH-π,CH-O相互作用和氢键是其主要的作用形式。该研究能为以HIV-1蛋白酶为靶标的抗艾滋病药物设计提供理论上的指导。     

分子动力学研究抑制剂APV与HIV-1蛋白酶的作用机制

采用分子动力学模拟和结合自由能计算研究了抑制剂APV与HIV-1蛋白酶的作用机制. 研究结果表明范德瓦尔斯作用主控了APV与HIV-1蛋白酶的结合. 采用基于残基的自由能分解方法计算了抑制剂-残基相互作用,结果表明9个残基Gly27、Ile32、Val47、Ile50、Ile84、Ala28′、Gly49′、Ile50′和Arg87′与APV产生了大于1.0 kcal/mol的强相互作用,而且证明CH-π,CH-O相互作用和极性作用是其结合的主要形式. 期待该结果可以为以HIV-1蛋白酶为靶标的抗艾滋病药物设计提供理论上的指导.     

分子动力学研究抑制剂APV与HIV-1蛋白酶的作用机制

采用分子动力学模拟和结合自由能计算研究了抑制剂APV与HIV-1蛋白酶的作用机制. 研究结果表明范德瓦尔斯作用主控了APV与HIV-1蛋白酶的结合. 采用基于残基的自由能分解方法计算了抑制剂-残基相互作用,结果表明9个残基Gly27、Ile32、Val47、Ile50、Ile84、Ala28′、Gly49′、Ile50′和Arg87′与APV产生了大于1.0 kcal/mol的强相互作用,而且证明CH-π,CH-O相互作用和极性作用是其结合的主要形式. 期待该结果可以为以HIV-1蛋白酶为靶标的抗艾滋病药物设计提供理论上的指导.     

HIV-1蛋白酶与抑制剂BEG相互作用的分子对接计算研究

本文使用分子对接方法和MM/PBSA方法计算抑制剂BEG与HIV-1蛋白酶的结合自由能,结果表明范德华相互作用主宰了BEG与HIV-1蛋白酶的结合,同时计算还证明分子对接采用的分子力场相比于Amber力场更适合于BEG-HIV蛋白酶系统。这篇论文还采用基于残基的自由能分解方法计算了抑制剂-残基相互作用,结果表明残基Leu23、Gly49、Ile50、Val82、Ile84、Asp25′、Gly27′、Ala28′、Gly49′、Ile50′和Ile84′与BEG产生了较强的相互作用,同时也证明CH-π和CH-O相互作用驱动了抑制剂BEG与HIV-1蛋白酶的结合。我们期望这个研究能为艾滋病治疗药物的合理化设计提供理论上的指导和实验上的参考。     

分子动力学研究抑制剂APV与HIV-1蛋白酶的作用机制

采用分子动力学模拟和结合自由能计算研究了抑制剂APV与HIV-1蛋白酶的作用机制.研究结果表明范德瓦尔斯作用主控了APV与HIV-1蛋白酶的结合.采用基于残基的自由能分解方法计算了抑制剂-残基相互作用,结果表明9个残基Gly27、Ile32、Val47、Ile50、Ile84、Ala28'、Gly49'、Ile50'和Arg87'与APV产生了大于1.0 kcal/mol的强相互作用,而且证明CH-π,CH-O相互作用和极性作用是其结合的主要形式.期待该结果可以为以HIV-1蛋白酶为靶标的抗艾滋病药物设计提供理论上的指导.     

I50V变异对HIV-1蛋白酶抑制剂Amprenavir抗药机制的分子动力学研究

HIV-1蛋白酶PR(HIV-1 protease)的变异对抑制剂产生抗药性,严重消弱抗艾滋病的治疗效果.I50V变异是HIV-1蛋白酶残基变异中最重要的一个.采用分子动力学模拟和溶解相互作用能方法SIE(solvated interaction energy)研究I50V变异对抑制剂APV(amprenavir)抗药机制.分子动力学分析表明I50V变异诱导HIV-1蛋白酶整体柔性的增加,影响了抑制剂与蛋白酶的相互作用.结合自由能计算表明范德华作用的下降驱动了I50V变异对APV的抗药性.基于残基的能量分解证明V50/V50'与APV的相互作用相对于野生型的I50/I50'明显减弱,诱导了抗药性.本研究能为高效的缓解抗药性抑制剂的研发提供一定的理论指导.     

分子动力学研究抑制剂pDI6W与MDM2的相互作用机制

p53-MDM2相互作用已经成为治疗癌症药物设计的重要靶标.本文采用分子动力学模拟和MM-PBSA(molecular mechanics-Possion-Boltzmann surface area)方法计算了肽类抑制剂pD16W与MDM2的结合自由能,结果证明范德华作用是pD16W与MDM2结合的主要力量.相关矩阵的计算结果表明pD16W的结合主要诱导了MDM2内部的反相关运动.基于成对残基的自由能分解计算不仅证明pD16W的5个残基Phe19′,Trp22′,Trp23′,Leu26′和Thr27′能够与MDM2产生较强的相互作用,而且确认了CH-π,CH-CH和π-πc相互作用驱动了pD16W在MDM2疏水裂缝中的结合.这为抗癌药物的设计提供了理论上的指导.     

分子动力学研究抑制剂pDI6W与MDM2的相互作用机制

p53-MDM2相互作用已经成为治疗癌症药物设计的重要靶标。本文采用分子动力学模拟和MM-PBSA(molecular mechanics-Possion-Boltzmann surface area)方法计算了肽类抑制剂pDI6W与MDM2的结合自由能,结果证明范德华作用是pDI6W与MDM2结合的主要力量。相关矩阵的计算结果表明pDI6W的结合主要诱导了MDM2内部的反相关运动。基于成对残基的自由能分解计算不仅证明pDI6W的5个残基Phe19′, Trp22′, Trp23′, Leu26′和Thr27′能够与MDM2产生较强的相互作用,而且确认了CH-π, CH-CH和π-π相互作用驱动了pDI6W在MDM2疏水裂缝中的结合。这为抗癌药物的设计提供了理论上的指导。     

p53-MDM2相互作用的分子力学和动力学研究

p53-MDM2相互作用的抑制已经成为治疗癌症的新方法. 本文将分子动力学模拟和MM-PBSA(molecular mechanics/passion-Boltzman surface area)方法结合起来研究MDM2-p53相互作用机制. 结果证明范德华相互作用驱动了MDM2与p53的结合. 基于残基-残基相互作用的计算不仅证明p53的三个残基Phe19′, Trp23′和Leu26′与MDM2有较强的相互作用,而且还发现另外两个残基Leu22′和Pro27′也与MDM2有较强的相互作用,这为抗癌药物的设计提供了新靶标. 同时也证明CH-CH,CH-π和π-π相互作用驱动了p53在MDM2疏水性裂缝中的结合.     

Fine structure and isotope shift of the 3s4d 3 D-3s3p 3 P, 3s5d 3 D-3s3p 3 P and 3p 2 3 P-3s3p 3 P Transitions of MgI

Summary We report the measurements of the³ D(3s4d)-³ P(3s3p)³ D(3s5d)-³ P(3s3p), and³ P(3p ²)-³ P(3s3p) transition frequency of MgI, the fine-structure separation and isotope shift between²⁴Mg and²⁶Mg. The measurements have been performed in a metastable atomic beam; a good agreement is found for data already existing in the literature. The accuracy of the measurements reported in this paper is mainly limited by the Doppler broadening of theI ₂ transitions used as a reference and by the precision in the knowledge of the related wavelengths.     

The gas phase infrared band contours of s-triazine and s-triazine-d3: The fundamentals of C3N3H3 and C3N3D3 and some overtone and combination bands of C3N3H3

The systematic application of band contour techniques to account for most of the observed features of the ir spectra of s-triazine and s-triazine-d₃ have been made as well as a critique as to the limitations of such methods. The experimental and computer methods used to study the gas phase infrared band contours of s-triazine and s-triazine-d₃ are out-lined. Contours of the five E′ fundamentals of s-triazine have been recorded under moderate resolution and analyzed to give the Coriolis constants $\text{ζ}{}_{\mathrm{i}}{}^{\mathrm{z}}$, i = 6–10. The effects of l-resonance are very apparent for ν₈ and ν₉, in the form of holes in the Q branches of these bands. Under the highest resolution available, ν₆ and ν₁₀ also show l-resonance effects. Values of the l-doubling constants $\text{q}{}_{\mathrm{i}}{}^{\mathrm{(+)}}$ were obtained for these four fundamentals. One of the parallel A₂″ fundamentals of C₃H₃N₃ (ν₁₂) has also been studied. It lies close to ν₁₀(E′) and an A × E type of second-order Coriolis resonance may be the cause of the intensity enhancement observed in the inner wings of the ν₁₂ and ν₁₀ bands. Hot bands of the type (ν_i + nν₁₄ ? nν₁₄) have been observed in the contours of ν₈, ν₁₀, and ν₁₂. This is felt to be responsible for the large difference between our observed zeta sum (?1.30) and the theoretical sum (?1.00).The gas phase infrared band contours of the five E′ and 2A₂″ fundamentals of C₃N₃D₃ have also been recorded under moderate resolution. From P-R separations and by computer simulation of the contours, values of the Coriolis constants $\text{ζ}{}_{\mathrm{i}}{}^{\mathrm{z}}$ have been obtained for the E′ modes. The effects of l-resonance have been observed for ν₈(E′) and ν₁₀(E′) and values of the l-doubling constants $\text{q}{}_{\mathrm{i}}{}^{\mathrm{(+)}}$ have been estimated. An extensive series of hot bands of the type (ν₁₂ + nν₁₄ ? nν₁₄) has been observed in the contour of the ν₁₂ (A₂″) fundamental. The mass effect on the Coriolis constants has been discussed.Infrared band contours of the overtone 2ν₇ and seven degenerate E′ combination bands of C₃N₃H₃ have been recorded under moderate resolution. Analysis of these contours using the P-R separation method and computer simulation of the contours has given values of $\text{ζ}{}_{\mathrm{<mtext>eff</mtext>}}{}^{\mathrm{z}}$ for these bands. Fermi resonance between 2ν₇ and ν₆ has been analyzed. The importance of considering both the observed contour as well as the observed frequency when assigning higher tone bands is illustrated.     

Dielectric investigations of solid solutions SrTiO3-KTaO3 and SrTiO3-KNbO3

The temperature dependences of the dielectric constant and dielectric hysteresis loops in ceramic samples of (1 ? x)SrTiO_3?x KNbO₃ and (1 ? x)SrTiO_3?x KTaO₃ (0 ≤ x ≤ 0.3) solid solutions prepared using different heat treatments have been investigated. Phase diagrams of the studied solid solutions have been constructed in the T-x coordinates. It has been shown that, after quenching of samples (spontaneous cooling at room temperature after long-term heating at the sintering temperature of the ceramic samples), the temperature of the induced phase transition increases because of the weakening of random electric fields associated with nonisovalent impurities due to their “frozen” nonequilibrium redistribution. For small concentrations x, strong dielectric relaxation is observed in the temperature range of 150–250 K. A model of relaxing centers, which is based on the local charge compensation of heterovalent impurities, has been proposed.     

Infrared spectra of matrix isolated BH3NH3, BD3ND3, and BH3ND3

The infrared spectra of ammonia-borane, BH₃NH₃, and two of its deuterated isotropic species, BD₃ND₃ and BH₃ND₃, isolated in argon matrix at liquid hydrogen temperature have been measured. Well resolved bands for these three isotopic species have been observed for all the fundamentals. A complete frequency assignment based on C₃v molecular symmetry has been made. A set of force constants have been calculated from the data for the two isotopes BH₃NH₃ and BD₃ND₃ using a valence force field. The agreement between experiment and frequencies calculated from these force constants for the mixed isotopic species, BH₃ND₃, substantiates the present assignment.     

LaGaO3:RE3+(RE3+=Eu3+,Ho3+)的光谱

本文用固态反应合成了钙钛矿型的LaGaO3和LaGaO3:RE3+(RE3+=Eu3+,Ho3+)荧光体,并观察了物相随不同的激活离子浓度的变化。测量了化合物在室温下的反射光谱,激发光谱和荧光光谱。研究了Eu3+的D0→7F2和Ho3+的5S2→5I8的荧光强度与激活离子浓度的关系,发现了浓度猝灭,并得到了最大荧光强度的浓度值。     

O_3 fast and simple treatment-enhanced p-doped in Spiro-MeOTAD for CH_3NH_3I vapor-assisted processed CH_3NH_3PbI_3 perovskite solar cells

We demonstrate a simple and fast post-deposition treatment with high process compatibility on the hole transport material(HTM) Spiro-MeOTAD in vapor-assisted solution processed methylammonium lead triiodide(CH_3NH_3PbI_3)-based solar cells. The prepared Co-doped p-type Spiro-MeOTAD films are treated by O_3 at room temperature for 5 min,10 min, and 20 min, respectively, prior to the deposition of the metal electrodes. Compared with the traditional oxidation of Spiro-MeOTAD films overnight in dry air, our fast O_3 treatment of HTM at room temperature only needs just 10 min,and a relative 40.3% increment in the power conversion efficiency is observed with respect to the result of without-treated perovskite solar cells. This improvement of efficiency is mainly attributed to the obvious increase of the fill factor and short-circuit current density, despite a slight decrease in the open-circuit voltage. Ultraviolet photoelectron spectroscopy(UPS) and Hall effect measurement method are employed in our study to determine the changes of properties after O_3 treatment in HTM. It is found that after the HTM is exposed to O_3, its p-type doping level is enhanced. The enhancement of conductivity and Hall mobility of the film, resulting from the improvement in p-doping level of HTM, leads to better performances of perovskite solar cells. Best power conversion efficiencies(PCEs) of 13.05% and 16.39% are achieved with most properly optimized HTM via CH_3NH_3I vapor-assisted method and traditional single-step method respectively.     

Terahertz Vibrational Modes in CH3NH3PbI3 and CsPbI3 Perovskite Films

JETP Letters - Films of CH3NH3PbI3 organometallic perovskite, which is currently considered as a promising basic material for new-generation solar cells, as well as films containing CsPbI3...     

Ba3La(BO3)3基质中Tb3+的光致发光

以高温固相法合成了Ba3La(BO3)3∶Tb3 发光材料。在254nm紫外光激发下,研究了Ba3La(BO3)3∶Tb3 的激发光谱、发射光谱、发光强度与Tb3 浓度的关系。确定了Ba3La(BO3)3基质中Tb3 的自身浓度猝灭机理;探讨了助熔剂LiCO、敏化剂Ce3 、Bi3 的加入对荧光粉的发光强度的影响。     

Far Infrared Spectra of Ammonia-Boron Trifluoride: NH3BF3 and ND3BF3

Abstract

Spectra of polycrystalline samples of NH₃BF₃ and ND₃BF₃ at 300 K and 98 K have been recorded in the frequency range 20-400 cm^?1. Isotopic frequency ratios are used to interpret the observed features in terms of the known molecular and crystal structures.