N-异丁酰基-3'-O-(1-氟-1,1,3,3-四异丙基-1,3-二硅氧烷-3-基)-2'-苄氧羰基鸟苷的NMR研究

本文采用氢氟酸吡啶鎓在5′-位选择性断裂1,1,3,3-四异丙基二硅氧烷基保护基的方法得到了核苷衍生物N-异丁酰基-3′-O-（1-氟-1,1,3,3-四异丙基-1,3-二硅氧烷-3-基）-2′-苄氧羰基鸟苷（化合物1）,并应用液相色谱串联质谱（LC-MS）、气相色谱-高分辨质谱（GC-HRMS）、液体1D和2D NMR谱（包括¹H NMR、¹³C NMR、¹⁹F NMR、DEPT、¹H-¹H COSY、¹H-¹³C HSQC和¹H-¹³C HMBC）,对产物的¹H、¹³C和¹⁹F NMR信号进行了归属,确定了其结构．     

19F NMR技术在蛋白质研究中的应用

因为¹⁹F核自身的特性,如自旋为1/2;丰度高(100%),具有与¹H相当的灵敏度;化学位移分布广且对环境敏感;绝大部分生物体内都不含¹⁹F因而无背景干扰等;¹⁹F NMR自诞生以来就成为非常有吸引力的研究手段. 现在,¹⁹F NMR已被广泛用于核磁共振成像、药物化学及生物大分子的研究,各个方面均有较多的相关文献综述. 该综述将集中讨论¹⁹F NMR在蛋白质研究中的应用,包括蛋白质¹⁹F标记方法,¹⁹F NMR在蛋白质结构、 动力学、蛋白质折叠、蛋白质与药物的相互作用及In-cell NMR中的应用.     

氟苯类化合物19F NMR化学位移的计算

提出了计算氟苯类化合物¹⁹F NMR化学位移的公式：δ_cal（¹⁹F）=-113.5+Δo+Δm+Δp+C, 结合最小二乘法通过线性回归得到了20种取代基参数, 计算结果以160种氟苯类化合物的263个¹⁹F NMR化学位移数据为样本点作回归检验,置信度为99.5%,计算值与实验值的平均偏差为0.628,计算值与实验值的标准偏差为4.720,约有93.2%的¹⁹F NMR化学位移计算值的计算误差<7.0（相对误差<0.7%）.     

PAMAM树状大分子与5-氟尿嘧啶相互作用的NMR研究

本文利用多种核磁共振（NMR）技术研究了聚酰胺-胺树状大分子（PAMAM）与5-氟尿嘧啶（5-FU）在水溶液中的相互作用.¹H NMR化学位移滴定结果表明5-FU分子结合在PAMAM分子表面,¹³C NMR化学位移滴定分析结果表明5-FU分子通过氢键或疏水间相互作用进入到PAMAM的内部疏水空腔.¹H核和¹⁹F核自旋-晶格弛豫时间（T₁）的测定结果也说明了二者之间存在相互作用.NOESY实验进一步验证了5-FU分子进入到PAMAM分子的内部空腔.本研究为研究树状大分子和药物小分子的相互作用提供了系统的NMR分析方法.     

19F固体核磁共振技术研究膜蛋白相互作用的进展

固体核磁共振技术因其可实现细胞膜环境中的蛋白质结构研究而广受关注.¹⁹F元素由于灵敏度高、天然丰度高,无生物背景等优点,被广泛应用于生物核磁共振技术中.氟标固体核磁共振技术常被用于细胞膜中蛋白质的相互作用研究,如：抗菌肽与细胞膜的相互作用、聚合膜蛋白结构分析等.此篇综述介绍了常用的蛋白质氟标修饰的实验方法,总结了常用的¹⁹F生物固体核磁共振实验技术,以及介绍了应用¹⁹F固体核磁共振研究膜蛋白的成功案例.此外,此篇综述讨论了¹⁹F固体核磁共振技术在蛋白质研究中的局限性.     

2,6-双(三甲基锡)-4,8-双(2-乙基己氧基)苯并[1,2-b∶4,5-b']二噻吩的合成与多核NMR研究

以苯并[1,2-b∶4,5-b´]二噻吩-4,8-二酮为原料合成了一种聚合物太阳能电池材料的单体2,6-双(三甲基锡)-4,8-双(2-乙基己氧基)苯并[1,2-b∶4,5-b´]二噻吩. 通过多核1D和2D NMR技术（包括1D ¹H、¹³C、¹¹⁹Sn、¹¹⁷Sn NMR、DEPT、选择性1D TOCSY及2D¹H-¹H COSY、gHSQC、gHMBC）表征了目标分子结构,完成了 ¹H、¹³C、¹¹⁹Sn 与¹¹⁷Sn NMR化学位移归属,并探讨了该化合物的NMR谱线特征.     

卡泊三醇的核磁共振谱解析

利用核磁共振氢谱（¹H NMR）、碳谱（¹³C NMR）、同核位移相关谱（¹H-¹H COSY）、异核单量子相干谱（HSQC）和异核多键相关谱（HMBC）等多种核磁研究方法对抗银屑病药物卡泊三醇的¹H、¹³C信号进行完全归属.     

DNP-EPR多功能谱仪中微波桥的设计与实现

在自主研制的动态核极化（Dynamic Nuclear Polarization,DNP）分子影像装置的基础上,提出了一种集DNP和电子顺磁共振（Electron Paramagnetic Resonance,EPR）于一体的多功能谱仪,并对其中的关键部件之一--微波桥进行了设计.微波桥的引入,实现了DNP微波发射机的集成化,以及在DNP谱仪基础上的EPR功能扩展.通过结构设计、电路仿真及系统测试,完成了高频谱纯度、高动态范围的微波发射机以及低噪声系数的微波检测系统的设计与制作.并通过DNP增强实验以及连续波EPR实验对微波桥的性能进行了验证.     

具有潜在抗菌活性的环丙沙星衍生物的NMR谱研究

利用核磁共振谱,通过¹H-¹]H COSY, gHMBC and APT (Attached Proton Test)实验对所合成的新化合物1环丙基-6-氟-7-（4-苯乙酰氨基硫代甲酰基-1-哌嗪基）-1,4-二氢-4-氧代喹啉-3-羧酸的NMR谱进行了分析,并对其谱峰进行了详细归属.     

三个C19-二萜生物碱的NMR数据全归属

C₁₉-二萜生物碱结构复杂多样,核磁共振（NMR）结构鉴定困难.本文从独龙乌头中分离得到三个C₁₉-二萜生物碱：taronenine E（1）、chasmaconitine（2）和vilmorisine（3）,综合运用多种NMR技术（包括¹H NMR、¹³C NMR、DEPT、¹H-¹H COSY、HSQC和HMBC）,对其NMR数据进行了完整归属和部分修正,为该类化合物的深入研究提供了参考.     

Computational study of the cooperative effects between tetrel bond and halogen bond in XCN⋅⋅⋅F2CO⋅⋅⋅YCN complexes (X = H,F, Cl,Br; Y = F,Cl, Br)

ABSTRACT

Ab initio calculations have been accomplished to study the cooperativity between the halogen bond and tetrel bond in the XCN???F2CO???YCN (X = H, F, Cl, Br; Y = F, Cl, Br) complexes. F₂CO at the same time plays the role of Lewis acid with the π-hole on the C atom and Lewis base with the O atom to participate in the tetrel bond and in halogen bond, respectively. According to the geometry survey, the effect of a tetrel bond on a halogen bond is more pronounced than that of a halogen bond on a tetrel bond and the intermolecular distances in the triads are always smaller than the corresponding values in the dyads. In all cases, the halogen bond and tetrel bond in the termolecular complexes are stronger compared with those in the bimolecular complexes. So, from the intermolecular distances, interaction energies and many-body interactions demonstrate that there is positive cooperativity between the halogen bond and tetrel bond. The molecular electrostatic potential, atoms in molecules and natural bond orbital methodologies are used to analyse the nature of interactions of the complexes.     

Theoretical study of cooperativity between hydrogen bond‒hydrogen bond,halogen bond‒halogen bond and hydrogen bond‒halogen bond in ternary FX…diazine…XF (X = H and Cl) complexes

ABSTRACT

In the present work, the cooperativity between hydrogen bond?hydrogen bond, halogen bond?halogen bond and hydrogen bond?halogen bond in ternary FX…diazine…XF (X = H and Cl) complexes is theoretically investigated. The sign of cooperative energy (E_coop) obtained in all of the triads is positive which indicates that the ternary complex is less stable than the sum of the two isolated binary complexes. Moreover, our calculations show that E_coop value in triads increases as FX…pyridazine…XF > FX…pyrimidine…XF > FX…pyrazine…XF. In agreement with energetic, geometrical and topological properties, electrostatic potentials and coupling constants across ¹⁵N…X?¹⁹F (X = ¹H or ³⁵Cl) hydrogen and halogen bonds indicate that hydrogen and halogen bonds are weakened in the considered complexes where two hydrogen and halogen bonds coexist. As compared to N…H hydrogen bond, it is also observed that cooperativity has greater effect on N…Cl halogen bond.     

Comparison of hydrogen and halogen bonds between dimethyl sulfoxide and hypohalous acid: competition and cooperativity

A theoretical study of the complexes formed between dimethyl sulfoxide (DMSO) and hypohalous acid (HOX, X = Cl, Br, and I) has been carried out at the MP2/aug-cc-pVTZ level. For each HOX, four minima binary complexes were found, two mainly with an OH???O hydrogen bond and the other two with an OX???O halogen bond. The hydrogen-bonded complexes are more stable than the halogen-bonded analogues for HOCl and HOBr, while both types of complexes have similar stability in the iodine case. A red shift was found for the associated H–O and X–O bond stretch vibrations and a small blue shift for the distant bonds. As the oxygen of DMSO simultaneously binds with two HOCl molecules, the corresponding interactions are weakened with diminutive effect. This diminutive effect is the largest in the complexes with two OH???O hydrogen bonds but the smallest in those with two OCl???O halogen bonds.     

Cooperativity between the hydrogen bonding and halogen bonding in F3CX ··· NCH(CNH) ··· NCH(CNH) complexes (X=Cl,Br)

MP2 calculations with the cc-pVTZ basis set were used to analyse the intermolecular interactions in F₃CX?···?NCH(CNH)?···?NCH(CNH) triads (X=Cl, Br), which are connected via hydrogen and halogen bonds. Molecular geometries, binding energies, and infrared spectra of the dyads and triads were investigated at the MP2/cc-pVTZ computational level. Particular attention was given to parameters such as the cooperative energies, cooperative dipole moments, and many-body interaction energies. All studied complexes, with the simultaneous presence of a halogen bond and a hydrogen bond, show cooperativity with energy values ranging between ?1.32 and ?2.88?kJ?mol^?1. The electronic properties of the complexes were analysed using the Molecular Electrostatic Potential (MEP), electron density shift maps and the parameters derived from the Atoms in Molecules (AIM) methodology.     

激发态下甘氨酸与水分子间氢键性质研究

在生物体中氨基酸通常以水作为溶剂,是形成细胞的重要成分.在该环境下,分子间氢键的产生会对氨基酸分子与水分子的结构和性质产生影响.为了研究其在基态和激发态下的性质,本文利用密度泛函理论(DFT)和含时密度泛函理论(TD-DFT)对甘氨酸分子和H₂O分子在基态和激发态下的分子间氢键的静电势、键长、自然键轨道(NBO)电荷、分子中的原子理论(AIM)分析、Wiberg键级b、红外(IR)光谱、空穴-电子轨道和基态与激发态之间的电子转移进行了理论研究.结果表明：分子间氢键的形成会导致分子结构的改变和红外光谱振动频率的移动.在激发态下,分子间氢键有不同程度的增强或减弱.该计算结果为氢键的形成和激发态下分子间氢键的研究提供理论依据.     

Cooperativity effects between σ-hole interactions: a theoretical evidence for mutual influence between chalcogen bond and halogen bond interactions in F2S···NCX···NCY complexes (X = F,Cl, Br,I; Y = H,F, OH)

Quantum chemical calculations are performed to study the cooperativity effects between chalcogen bond and halogen bond interactions in F₂S···NCX···NCY complexes, where X = F, Cl, Br, I and Y = H, F, OH. These effects are investigated in terms of geometric and energetic features of the complexes, which are computed by second-order Møller–Plesset perturbation theory (MP2). For each F₂S···NCX···NCY complex studied, the effect of cooperativity on the chalcogen bond is dependent on the strength of halogen bond. The results indicate that the interaction energies of chalcogen and halogen bonds in the triads are more negative relative to the respective dyads. The interaction energy of chalcogen bond is increased by 31%–49%, whereas that of halogen bond by 28%–62%. The energy decomposition analysis reveals that electrostatic force plays a main role in the cooperativity effects between the chalcogen bond and halogen bond interactions. The topological analysis, based on the quantum theory of atoms in molecules, is used to characterise the interactions and analyse their enhancement with varying electron density at bond critical points.     

H DNP at 1.4 T of Water Doped with a Triarylmethyl-Based Radical

Recently a triarylmethyl-based (TAM) radical has been developed for research in biological and other aqueous systems, and in low magnetic fields, 10 mT or less, large ¹H dynamic nuclear polarization (DNP) enhancements have been reported. In this paper the DNP properties of this radical have been investigated in a considerably larger field of 1.4 T, corresponding to proton and electron Larmor frequencies of 60 MHz and 40 GHz, respectively. To avoid excessive microwave heating of the sample, an existing DNP NMR probe was modified with a screening coil, wound around the sample capillary and with its axis perpendicular to the electric component of the microwave field. It was found that with this probe the temperature increase in the sample after 4 s of microwave irradiation with an incident power of 10 W was only 16°C. For the investigations, 10 mM of the TAM radical was dissolved in deionized, but not degassed, water and put into a 1-mm i.d. and 6-mm long capillary tube. At 26°C the following results were obtained: (I) The relaxivity of the radical is 0.07 (mMs)⁻¹, in accordance with the value extrapolated from low-field results; (II) The leakage factor is 0.63, the saturation factor at maximum power is 0.85, and the coupling factor is −0.0187. It is shown that these results agree very well with an analysis where the electron–dipolar interactions are the dominant DNP mechanism, and where the relaxation transitions resulting from these interactions are governed by translational diffusion of the water molecules. Finally, the possibilities of combining DNP with magnetic resonance microscopy (MRM) are discussed. It is shown that at 26°C the overall DNP-enhanced proton polarization should become maximal in an external field of 0.3 T and become comparable to the thermal equilibrium polarization in a field of 30 T, considerably larger than the largest high-resolution magnet available to date. It is concluded that DNP MRM in this field, which corresponds to a standard microwave frequency of 9 GHz, has the potential to significantly increase the sensitivity in NMR and MRI experiments of small aqueous samples doped with the TAM radical.     

脉冲动态核极化增强的NMR 和MRI 系统研究

该文介绍了一种自行设计和构建的可扩展脉冲动态核极化谱仪,可以实现核磁共振波谱与磁共振成像的功能．该仪器的新颖设计主要有：1) 采用基于PCIe 的分布式总线结构,能够极大地提高数据传输效率和通信可靠性,实现精确控制脉冲序列;2) 采用外部高速的DDR 芯片存储脉冲序列元素和FID 数据,可以极大的提高脉冲序列的执行速度,减少快速成像序列的TR 时间间隔;3) 采用时钟移相技术,可以精确产生分辨率为纳秒级别的数字脉冲．最后对该仪器的动态核极化-磁共振波谱与核磁共振成像功能进行了实验验证．     

Molecular Diffusion and DNP Enhancement in Aqueous Char Suspensions

The heterogeneous¹H dynamic nuclear polarization (DNP) effect is studied at low magnetic fields for a system consisting of several newly synthesized carbon chars suspended in water. By using Fourier Transform pulsed-field-gradient spin–echo NMR spectroscopy, several different self-diffusion coefficients have been observed in aqueous char suspensions, corresponding to regions of differing water mobility in the porous structure. Proton spin–lattice relaxation data generally confirm the results of molecular diffusion measurements. Through utilization of the Torrey model, the influence of “cage effects” on DNP enhancement in porous media is discussed. Results suggest that short-range nuclear–electronic interactions in pores have a dominant effect on DNP enhancement in char suspensions.     

Cooperative effects between F … Ag bonded and X … Br (Cl) halogen-bonded interaction in BrF(ClF) … AgX … BrF(ClF) (X = F,Cl, Br) complexes: a theoretical study

The equilibrium structures, interaction energies and binding properties of ternary BrF(ClF)?… AgX?…?BrF(ClF)(X?=?F, Cl, Br) complexes and the corresponding binary systems have been studied by DFT method at the X3LYP/aug-cc-pVQZ level. Cooperative effects are probed by analysing charge transfer, electronic properties and orbital interactions when F?…?Ag bond and X?…?Br (Cl) halogen bond coexist in the same complex. The results indicate that the X?…?Br (Cl) halogen bond has a greater enhancing effect than the F?…?Ag bond does, resulting in a shorter binding distances, larger interaction energies and greater electron densities for the ternary complexes than for the corresponding binary ones. In addition, the origins of both the F?…?Ag bond and X?…?Br (Cl) halogen bond have been deduced via energy decomposition.