核苷酸、聚核苷酸和核酸猝灭Tb3+-钛铁试剂络合物荧光的机理研究

研究了核苷酸、聚核苷酸和核酸对Tb³⁺－钛铁试剂(TR)络合物的荧光碎灭机理,认为荧光猝灭过程是核苷酸、聚核苷酸和核酸分子中的磷酸基组分与TR竞争Tb³⁺离子,生成实验条件下无荧光的二元络合物的静态猝灭过程;用Tb³⁺－TR络合物荧光探针研究DNA嵌入剂和金属离子与DNA相互作用的实验结果说明这一机理是合理的.     

核酸工具酶辅助的金属稳定同位素标记方法在生物分析中的应用

本文主要概述了近年来核酸工具酶辅助的基于金属稳定同位素标记的电感耦合等离子体质谱(ICP-MS)检测方法在生物分析中的发展和应用,简要介绍了该方法在蛋白质、核酸及一些生物小分子检测中的应用。最后对核酸工具酶辅助的基于金属稳定同位素标记的电感耦合等离子体质谱(ICP-MS)检测方法的发展前景做了展望。     

β-Homoalanyl PNAs: Synthesis and Indication of Higher Ordered Structures

Self-pairing complexes with extraordinarily high stability are formed by β-PNAs with four to six units of the nucleo-β-amino acid 1 . The key step in the synthesis is a Mitsunobu reaction between a β-homoserine and a purine derivative.     

DNA Microarrays

The complete human genes (ca. 100 000) as well as the whole spectrum of biological diversity should soon be able to be analyzed simultaneously by means of DNA microarrays using the fast technical advances that are occurring in this area. The particular strength of array analysis, typically based on the hybridization of nucleic acid probes attached to microchips with labeled RNA or DNA samples, results from the highly redundant measurement of many parallel hybridization events (see picture), which leads to an extraordinary level of assay validation.     

聚二烯丙基二甲基氯化铵与核酸相互作用的共振光散射光谱及分析应用

实验基于核酸与聚阳离子聚二烯丙基二甲基氯化铵(PDDA)的相互作用导致共振光散射(RLS)增强的现象来测定核酸。考察了pH值、PDDA浓度和离子强度对体系共振光散射强度的影响。在优化条件下,建立了用RLS光谱测定微量核酸的新方法。方法的抗干扰能力较强,可允许大部分的常见金属离子、核苷酸、氨基酸、糖、蛋白质等干扰物质的存在。同时用于合成样品的分析,结果令人满意。     

分子信标的原理、应用及其研究进展

分子信标是一种设计巧妙的新型荧光标记核酸探针。特殊的发夹结构使分子信标具有很强的特异性识别靶标序列的能力 ,目前已成为分子生物学和生物技术中一种强有力的研究工具。本文介绍了分子信标的原理及其在 PCR、核酸序列的分析、活细胞内核酸的动态检测、蛋白质 (酶 )与核酸的相互作用等方面的应用和研究进展。     

甲基紫6B与核酸作用的共振光散射光谱及其分析应用

将三苯甲烷类碱性染料甲基紫6B用于核酸的共振光散射测定。在pH10.8的缓冲液中 ,核酸的加入导致甲基紫6B在386nm处共振光散射的增强 ,其强度与核酸的质量浓度呈线性关系 ,据此建立了一种测定核酸的共振光散射法。fsDNA与 yRNA的线性范围分别为0.083～1.0mg·L -1和0.076～0.8mg·L -1,检出限分别为82.6和75.3μg·L -1。将该法用于混合样品中核酸的测定 ,结果令人满意。     

Improving real-time measurement of H/D exchange using a FTIR biospectroscopic probe

We describe the improvement of a novel approach to investigating hydrogen/deuterium (H/D) exchange kinetics in biomolecules using transmission infrared spectroscopy. The method makes use of a Fourier transform infrared spectrometer coupled with a microdialysis flow cell to determine exchange rates of labile hydrogens. With this cell system, the monitoring of exchange reactions has been studied here as a function of some cell characteristics such as: (a) dialysis membrane surface contacting both the H₂O and D₂O compartments; (b) molecular cutoff of dialysis membrane; and (c) distance between the cell-filling holes. The best improvement has been obtained by increasing the dialysis membrane surface followed by increase of molecular cutoff. However, not significant differences were found using various distances between filling holes. The fastest exchange rate which can be measured with the cell system used here is found to be k = 0.41 ± 0.02 min⁻¹, that is, about threefold greater than the one got in a previous work. This microdialysis flow cell has been used here for the study of H/D exchange in nucleic acids with subsequent structural analysis by 2D correlation spectroscopy.     

Current applications and future trends of molecular diagnostics in clinical bacteriology

Molecular diagnostics of infectious diseases, in particular, nucleic-acid-based methods, are the fastest growing field in clinical laboratory diagnostics. These applications are stepwise replacing or complementing culture-based, biochemical, and immunological assays in microbiology laboratories. The first-generation nucleic acid assays were monoparametric such as conventional tests, determining only a single parameter. Improvements and new approaches in technology now open the possibility for the development of multiparameter assays using microarrays, multiplex nucleic acid amplification techniques, or mass spectrometry, while the introduction of closed-tube systems has resulted in rapid microbial diagnostics with a subsequently reduced contamination risk. Whereas the first assays were focused on the detection and identification of microbial pathogens, these new technologies paved the way for the parallel determination of multiple antibiotic resistance determinants or to perform microbial epidemiology and surveillance on a genetic level.     

精氨酸侧链和核酸碱基间离子氢键作用强度分析

采用MP2/6-31+G(d,p)方法优化得到了22个由精氨酸侧链与碱基尿嘧啶、 胸腺嘧啶、 胞嘧啶、 鸟嘌呤及腺嘌呤形成的氢键复合物的气相稳定结构, 使用包含BSSE校正的MP2/aug-cc-pVTZ方法计算得到了复合物的气相结合能, 通过MP2/6-31+G(d,p)方法和PCM模型优化得到了复合物的水相稳定结构, 采用MP2/aug-cc-pVTZ方法和PCM模型计算得到了复合物的水相结合能. 研究发现, 精氨酸侧链与碱基间的离子氢键作用强度与单体间电荷转移量、 氢键临界点电子密度及二阶作用稳定化能密切相关. 与中性氢键相比, 离子氢键作用具有更显著的共价作用成分. 研究还发现, 精氨酸侧链和碱基间形成的氢键复合物的稳定性次序可以通过氢键受体碱基分子上氧原子和氮原子的质子化反应焓变进行预测, 质子化反应焓变越负, 形成的氢键复合物越稳定.