β-丙氨酸的THz时域光谱研究

运用THz时域光谱测试技术(THz-TDS)与理论模拟相结合的方法, 研究了β-丙氨酸在THz波段的光谱特性. 在室温氮气环境中, 得到了样品在0.2～2.4 THz波段的吸收谱和折射率谱, 表明其特征吸收峰位于2.11 THz处, 平均折射率为1.96. 同时利用Gaussian 03软件的半经验理论计算了该分子在0.1～10.0 THz的振动吸收谱, 其在0.2～2.4 THz波段的吸收峰与实验相互对应, 且峰位符合较好. 研究了分子低频的振动模式, 并给出了分子的构象参数.     

百菌清晶体太赫兹光谱理论模拟分析

本研究从实验和理论分析两方面探讨了杀菌剂百菌清固体在0.4～3.0 THz的光谱特性。利用太赫兹时域光谱技术(THz-TDS)获得了在这一频谱范围内百菌清固体分子的折射率谱和吸收谱。为了更好地对实验吸收谱进行解析,克服单分子模拟缺陷,从晶体分子结构方面分析在0.4～3.0 THz波段百菌清分子结构变化和振动吸收谱,对百菌清THz实验吸收谱进行了指认,并分析了百菌清固体分子特征吸收峰产生机理。研究表明,晶体结构理论模拟弥补了单分子模拟的缺陷,完成了对11处所有实验特征吸收峰的验证。实验谱主要由分子之间Cl—C—C,N—C—C键相互作用和晶胞内分子的集体振动产生。     

含硫氨基酸的太赫兹光谱

利用太赫兹时域光谱(THz-TDS)技术研究室温条件下多晶含硫氨基酸L-蛋氨酸(Met)和L-半胱氨酸(Cys)的光谱特性, 得到相应的吸收谱和折射率谱, 表明含硫氨基酸在THz波段具有区别于其它氨基酸的显著特征. 在实验测量的有效光谱范围0.2～2.8 THz内, L-蛋氨酸的THz吸收峰分别位于1.06, 1.88和2.70 THz; L-半胱氨酸的吸收峰分别位于1.40, 1.70, 2.33和2.61 THz, 两种氨基酸的平均折射率均为1.44. 利用GAUSSIAN 03软件包中的Hartree-Fock理论计算了蛋氨酸双分子的低频振动谱, 表明了与蛋氨酸各吸收峰对应的分子微观振动模式, 并对实验光谱进行了解析讨论.     

萘醌及其衍生物的太赫兹时域光谱研究

用太赫兹(THz)时域光谱技术研究了室温条件下的萘醌及其衍生物1,2-萘醌、1,2-萘醌-4-磺酸钠、甲萘醌、白花丹素、胡桃醌的光谱特征,得到了各自的吸收谱和折射率。结果表明,萘醌及其衍生物在此波段有不同的吸收特征,利用太赫兹时域光谱能够鉴别分子结构存在微小差别的化合物。在对样品的吸收谱进行比较的基础上,讨论了分子结构和分子间晶格振动与THz光谱特征吸收的关系。     

太赫兹时域光谱技术在化学和生物学研究中的应用

太赫兹时域光谱(Terahertz Time Domain Spectroscopy,THz-TDS)技术作为一种新的研究手段在凝聚态、气体以及生物分子研究中有着重要的作用。它利用物质在THz波段的不同特征吸收来研究物质的结构、组成及其相互作用等。本文主要介绍了THz-TDS技术在化学及生物学领域中的应用进展以及目前存在的问题,对其前景进行了展望。     

20种α-氨基酸的太赫兹光谱及其分子结构的相关性

应用太赫兹时域光谱(THz-TDS)技术, 在室温下对构成蛋白质的20种基本氨基酸的多晶粉末压片样品进行了光谱测试分析. 结果表明, 所有氨基酸对THz波反应非常灵敏, 在0.2-3.0 THz的有效频谱范围内, 表现出各自特征吸收峰, 故而利用THz光谱可以有效地区别不同种类的氨基酸. 我们以新数据验证和补充了前人的研究结果, 建立了以氨基酸分子结构及其THz光谱特征为基础的分类方案, 讨论并揭示了氨基酸分子的结构差异与其THz吸收光谱之间的相关性. 认知这些相关性将有助于鉴定氨基酸分子, 促进THz光谱学的理论研究以及在生物医学领域的推广应用.     

L-和DL-福多司坦的太赫兹光谱分析

利用太赫兹时域光谱技术(THz-TDS)在室温下对L-福多司坦和DL-福多司坦进行测量,发现L-和DL-福多司坦在THz波段都有特征吸收峰,且两者的吸收谱有明显差异.运用密度泛函理论的B3LYP方法计算了L-和DL-福多司坦在太赫兹波段的吸收谱,并对L-和DL-福多司坦的特征吸收峰进行了指认,理论计算与实验结果基本吻合.此外,还对福多司坦胶囊成品药进行了测量,发现该胶囊的吸收谱与L-福多司坦非常吻合,证明胶囊药的主要成分为L-福多司坦.这项研究对手性物质的检测以及化合物有效成分的鉴别有一定的参考作用.     

常见五元糖的太赫兹时域光谱

利用基于飞秒超快激光的太赫兹时域光谱(terahertz time domain spectroscopy, THz-TDS)对D-木糖、D-核糖、D-阿拉伯糖、D-来苏糖及相关的五元糖进行了研究, 得到了它们在0.1~2.0 THz波段的THz-TDS吸收谱图. 不同糖类化合物的吸收谱表现出明显的特征, 表明THz-TDS技术可以分辨化合物结构上的微小差异, 可以应用于物质检测与分析. 同时还研究比较了不同旋光性五元糖的THz-TDS光谱.     

D-、L-和DL-青霉胺的太赫兹时域光谱

利用太赫兹时域光谱技术(THz-TDS)对D-、L-和DL-青霉胺的研究发现, 三种样品在0.2 THz到1.8 THz波段的吸收光谱存在显著差异, 实验结果表明, THz吸收光谱能够鉴别青霉胺对映异构体, 这一特点将可以用于青霉胺药物的检测. 本文利用纯D-、L-青霉胺的THz吸收光谱, 对D-、L-青霉胺混合样品的THz吸收光谱进行拟合, 证明可以用THz光谱定量分析混合样品中D-、L-青霉胺的相对含量. 这项研究为手性药物分子检测和分析提供了新的实验方法, 也对深入了解手性药物与生物靶分子之间相互作用提供了启示.     

固态多环芳烃化合物的THz时域光谱研究

利用太赫兹时域光谱技术室温下对芳烃化合物萘、联苯、葸、α-萘酚和β-萘酚在3-73cm^-1(0．1．2．2THz)频谱范围内进行了光谱测量。结果表明，多环芳烃化合物在此波段有不同的吸收特征。不能形成氢键的萘、联苯和蒽在67cm^-1(2．0THz)附近均有一吸收峰，这可能是由于分子之间的振动即晶格振动所引起的；而能够形成氢键的口一萘酚和卢．萘酚，其吸收峰可归结于分子间氢键的相互作用所引起的集体振动模式。1Hz时域光谱不仅能够鉴别分子结构存在微小差别的化合物而且还能鉴别同分异构体。     

Modified corrections for London forces in solid-state density functional theory calculations of structure and lattice dynamics of molecular crystals

Dispersion forces are critical for defining the crystal structures and vibrational potentials of molecular crystals. It is, therefore, important to include corrections for these forces in periodic density functional theory (DFT) calculations of lattice vibrational frequencies. In this study, DFT was augmented with a correction term for London-type dispersion forces in the simulations of the structures and terahertz (THz) vibrational spectra of the dispersion-bound solids naphthalene and durene. The parameters of the correction term were modified to best reproduce the experimental crystal structures and THz spectra. It was found that the accurate reproduction of the lattice dimensions by adjusting the magnitude of the applied dispersion forces resulted in the highest-quality fit of the calculated vibrational modes with the observed THz absorptions. The method presented for the modification of the dispersion corrections provides a practical approach to accurately simulating the THz spectra of molecular crystals, accounting for inherent systematic errors imposed by computational and experimental factors.     

A characterization study on 2,6-dimethyl-4-nitropyridine N-oxide by density functional theory calculations

This study deals with the identification of a title compound, 2,6-dimethyl-4-nitropyridine N-oxide by means of theoretical calculations. The optimized molecular structures, vibrational frequencies, corresponding vibrational assignments, thermodynamic properties and atomic charges of the title compound in the ground state were evaluated using density functional theory (DFT) with the standard B3LYP/6-311G(d,p) method and basis set combination for the first time. Theoretical vibrational spectra were interpreted with the aid of normal coordinate analysis based on scaled density functional force field. The results show that the optimized geometric parameters (bond lengths and bond angles) and vibrational frequencies were observed to be in good agreement with the available experimental results. Based on the results of comparison between experimental results and theoretical data, the chosen calculation level is powerful approach for understanding the molecular structures and vibrational spectra of the 2,6-dimethyl-4-nitropyridine N-oxide. Moreover, we not only simulated frontier molecular orbitals (FMO) and molecular electrostatic potential (MEP) but also determined the transition state and energy band gap. Based on the investigations, the title compound is found to be useful to bond metallically and interact intermolecularly. Infrared intensities and Raman activities were also reported.     

丙氨酸晶体太赫兹振动光谱的实验和理论研究

利用太赫兹时域光谱和低频拉曼光谱仪研究了丙氨酸晶体在0.2-2.6 THz 范围内的太赫兹吸收和拉曼散射光谱. 研究表明: 在该低频范围有四个振动模式, 其中两个只具有拉曼活性, 其余两个同时具有红外和拉曼活性. 基于B3LYP杂化密度泛函的自洽场晶体轨道法对丙氨酸周期性结构进行了理论研究和光谱计算. 通过比较实验和理论结果, 指认了实验光谱特征峰所属的不可约表示. 通过理论计算得到的图形, 得出在此低频范围的振动模式主要包含分子间氢键的扭转和摇摆运动.     

Experimental and theoretical study on the structure and vibrational spectra of β-2-aminopyridinium dihydrogenphosphate

Experimental and theoretical vibrational spectra of β-2-aminopyridinium dihydrogenphosphate (β-2APDP) have been investigated. The FT-IR spectrum of β-2APDP was recorded in the region 4000-400 cm(-1). The optimized molecular structure and theoretical vibrational frequencies of β-2APDP have been investigated using ab initio Hartree-Fock (HF) and density functional B3LYP method with 6-311++G(d,p) basis set. The optimized geometric parameters (bond lengths and bond angles) and theoretical frequencies have been compared with the corresponding experimental data and it is found that they agree well with each other. All the assignments of the theoretical frequencies were performed by potential energy distributions using VEDA 4 program. Furthermore, the used scale factors were obtained from the ratio of the frequency values of the strongest peaks in the experimental and theoretical IR spectra. From the results it was concluded that the B3LYP method is superior to the HF method for the vibrational frequencies.     

Experimental, theoretical calculations of the vibrational spectra and conformational analysis of 2,4-di-tert-butylphenol

In the present work, we reported a combined experimental and theoretical study on conformational stability, molecular structure and vibrational spectra of 2,4-di-tert-butylphenol (2,4-DTBP). The FT-IR (400-4000cm(-1)) and FT-Raman spectra (50-3500cm(-1)) of 2,4-DTBP were recorded. The molecular geometry, harmonic vibrational frequencies and bonding features of 2,4-DTBP in the ground-state have been calculated by using the density functional BLYP/B3LYP methods. The energy calculated by time-dependent density functional theory (TD-DFT) result complements with the experimental findings. The calculated highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) energies show that charge transfer occurs within the molecule. Finally the calculation results were compared with measured infrared and Raman spectra of the title compound which showed good agreement with observed spectra.     

Molecular structure, vibrational, UV and NBO analysis of 4-chloro-7-nitrobenzofurazan by DFT calculations

In the present work, we reported a combined experimental and theoretical study on molecular structure, vibrational spectra and NBO analysis of 4-chloro-7-nitrobenzofurazan (NBD-Chloride). The FT-IR (400-4000 cm(-1)) and FT-Raman spectra (50-4000 cm(-1)) of NBD-Chloride were recorded. The molecular geometry, harmonic vibrational frequencies and bonding features of NBD-Chloride in the ground-state have been calculated by using the density functional B3LYP method with 6-311++G (d, p) as higher basis set. The energy and oscillator strength calculated by time-dependent density functional theory (TD-DFT) result in DMSO and CDCl3 solvents complements with each other. The calculated HOMO and LUMO energies show that charge transfer occurs within the molecule. Finally the calculation results were applied to simulate infrared and Raman spectra of the title compound which show good agreement with observed spectra.