Synthesis,spectroscopic characterization and EPR studies on electron transfer reactions of bis[N-(2,5-di-tert-butylphenyl)salicylaldiminato]copper complexes with PPh3

New bidentate N-(2,5-di-tert-butylphenyl)salicylaldimines bearing X = H, HO, CH3O, Br, NO2, 3,5-di-Br, 3-NO2-5-Br and 5,6-benzo substituents on the salicylaldehyde moiety, LxH, and their mononuclear bis[N-(2,5-di-tert-butylphenyl)salicylaldiminato]copper(II) complexes, Cu(Lx)2, have been prepared and investigated by IR, UV-Visible, 1H NMR, ESR spectroscopy, magnetic measurements, as well as reactions of Cu(LX)2 with PPh3 were studied. It has been found that some complexes with X = HO and CH3O unlike their electron-withdrawing and unsubstituted analogues are readily reduced by PPh3 via intramolecular electron transfer from ligand to copper(II) to give Cu-stabilized radical intermediates. The spectra of the primary radicals interpreted in terms of couplings of unpaired electron with (63,65)Cu, 31P, 14N nuclei and aromatic protons.     

Ion/molecule reactions of cation radicals formed from protonated polypeptides via gas-phase ion/ion electron transfer

Cation radicals formed via gas-phase electron transfer to multiply protonated polypeptides have been found to react with molecular oxygen. Such cation radicals are of interest within the context of electron transfer dissociation, a phenomenon with high utility for the characterization of peptide and protein primary structures. Most of the cation radicals show the attachment of O(2) under room temperature storage conditions in an electrodynamic ion trap. At higher temperatures and under conditions of collisional activation, the oxygen adduct species lose O(2), HO(*), or HO(2)(*), depending upon the identity of the side chain at the radical site. The fragments containing the C-terminus, the so-called z-ions, which are predominantly radical species, engage in reactions with molecular oxygen. This allows for the facile distinction between z-ions and their complementary even-electron c-ion counterparts. Such a capability has utility in protein identification and characterization via mass spectrometry. Intact electron transfer products also show oxygen attachment. Subsequent activation of such adducts show dissociation behavior very similar to that noted for z-ion adducts. These observations indicate that ion/radical reactions can be used to probe the locations of radical sites in the undissociated electron transfer products as well as distinguish between c- and z-type ions.     

Photolytic and radiolytic oxidation of humic acid

The reactions of Br(2)(˙-), Br˙, HO˙ and N(3)˙ with Aldrich humic acid (AHA) were investigated. The Br/Br(2)(˙-) radicals were obtained in flash-photolysis experiments (λ(exc) = 266 nm) performed with NaS(2)O(8) solutions in the presence of bromide ions. HO˙ and N(3)˙ radicals were generated by pulse radiolysis of N(2)O-saturated solutions. From the combination of a bilinear analysis and computer simulations of the absorbance traces, it was possible to obtain information on the rate constants for the reactions of Br(2)(˙-), Br˙, HO˙ and N(3)˙ with AHA and on the intermediate species involved in the mechanism. Evidence for the participation of phenoxyl radicals (λ(max) = 410 nm) is given.     

4-硝基喹啉氧化物激发三重态与甲硫氨酸二肽之间的电子转移

4 硝基喹啉氧化物 ( 4ＮＱＯ)在紫外光的作用下 ,发生电子跃迁生成较高量子产额的激发三重态 ,这一性质在光化学研究中可作为光敏剂 ,同时又是一种典型的致癌物 .在水溶液中 ,具有与ＤＮＡ通过电荷转移作用连接到碱基上的性质 ,这一性质可能与其致癌作用有关[1～ 4].由于ＤＮＡ具有的遗传功能通过染色体来实现 ,染色体是ＤＮＡ与蛋白质形成的配合物 ,这种蛋白质结合在ＤＮＡ上 ,同ＤＮＡ碱基一样参与化学反应诱导的致癌过程 .因此 ,研究光引发 4ＮＱＯ与氨基酸及相关肽的反应对于了解光诱导 4ＮＱＯ致癌作用的分子机制有重要意义 .Ｓｅｋｉ…     

Electron transfer in amino acid.nucleic acid base complexes: EPR, ENDOR, and DFT study of X-irradiated N-formylglycine.cytosine complex crystals

Single crystals of the 1:1 complex of the nucleic acid base cytosine and the dipeptide N-formylglycine (C.NFG) have been irradiated at 10 and 273 K to doses of about 70 kGy and studied at temperatures between 10 and 293 K using 24 GHz (K-band) and 9.5 GHz (X-band) electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR), and ENDOR-induced EPR (EIE) spectroscopy. In this complex, the cytosine base is hydrogen bonded at positions N3 and N4 to the carboxylic group of the dipeptide, and the N3 position of cytosine has become protonated by the carboxylic group. At 10 K, two major radicals were characterized and identified. One of these (R1) is ascribed to the decarboxylated N-formylglycine one-electron oxidized species. The other (R2) is the N3-protonated cytosine one-electron reduced species. A third minority species (R3) appears to be a different conformation or protonation state of the one-electron reduced cytosine radical. Upon warming, the R2 and R3 radicals decay at about 100 K, and at 295 K, the only cytosine-centered radicals present are the C5 and C6 H-addition radicals (R5, R6). The R1 radical decays at about 150 K, and a glycine backbone radical (R4) grows in slowly. Thus, in the complex, a complete separation of initial oxidation and reduction events occurs, with oxidation localized at the dipeptide moiety, whereas reduction occurs at the nucleic acid base moiety. DFT calculations indicate that this separation is driven by large differences in electron affinities and ionization potentials between the two constituents of the complex. Once the initial oxidation and reduction products are trapped, no further electron transfer between the two constituents of the complex takes place.     

Characterization of transient species in laser photolysis of aromatic amino acids using acetone as photosensitizer

The photochemical processes of aromatic amino acids were investigated in aqueous solution using acetone as photosensitizer by KrF (248 nm) laser flash photolysis. Laser-induced transient species were characterized according to kinetic analysis and quenching experiments. The intermediates recorded were assigned to the excited triplet state of tryptophan, the radicals of tryptophan and tyrosine. The excited triplet state of tryptophan produced via a triplet-triplet excitation transfer and the radicals arising from electron transfer reaction has been identified. Neither electron transfer nor energy transfer between triplet acetone and phenylalanine can occur in photolysis of phenylalanine aqueous solution which contains acetone. Furthermore, triplet acetone-induced radical transformation: Trp/N-Tyr→Trp-Tyr/O was observed directly in photolysis of dipeptide (Trp-Tyr) aqueous solution containing acetone, and the transformation resulting from intramolecular electron transfer was suggested.     

Synthesis, spectroscopic characterization and ESR studies on electron transfer reactions of bis[N-(2,6-di-tert-butyl-1-hydroxyphenyl)salicylaldiminato]-copper(II) complexes with PbO2 and PPh3

New bis[N-(2,6-di-t-butyl-1-hydroxyphenyl)salicylideneminato]copper(II) complexes bearing HO and CH3O substituents on the salicyaldehyde moiety were prepared, and their spectroscopic properties, as well as redox reactivity towards PbO2 and PPh3, examined by ESR and UV spectroscopy. In the process of synthesis of HO complexes unlike CH3O the oxidative C-C coupling of coordinated salicylaldimine ligands does not takes place. The powder ESR spectra of CH3O substituted complexes unlike of HO analogues are typical of a triplet state Cu(II) dimers with a half-field forbidden (deltaM = +/- 2) transition and the allowed transitions (AM = +/- 1) dimeric form of the complexes at 300 and 113 K. The one-electron oxidation of 3-CH3O and all of the OH complexes with PbO2 to give indophenoxyl type secondary radicals which are significantly different from those observed for analogues Cl, Br and NO2 substituted chelates. The presented complexes unlike their electron-withdrawing analogues are readily reduced by PPh3 via intramolecular electron transfer from ligand to copper(II) to give various radical intermediates as well as Cu(I) radical ligand compounds. The analysis of ESR spectra all of the complexes and radical intermediates are presented.     

Kinetics and mechanisms of the electron transfer reactions of oxo-centred carboxylate bridged complexes, [Fe3(mu3-O)(O2CR)6L3]ClO4, with verdazyl radicals in acetonitrile solution

A range of oxo-centred, carboxylate bridged tri-iron complexes of general formula [Fe3(mu3-O)(O2CR)6L3]ClO4(R=CH2CN, CH2F, CH2Cl, CH2Br, p-NO2C6H4; L=pyridine, 3-methylpyridine, 4-methylpyridine, 3,5-dimethylpyridine, 3-cyanopyridine and 3-fluoropyridine) have been prepared and characterised. The choice of R and L was dictated by the requirement that the complexes undergo a one-electron reduction when reacted with verdazyl radicals. All except the complexes where L=pyridine and R=CH2CN, CH2Cl and p-NO2C6H4 have not been previously reported. The redox behaviour of these compounds has been investigated using cyclic voltammetry in acetonitrile in the absence and in the presence of free L. In general, all complexes exhibited reversible one-electron reductions. Electrochemical behaviour improved in the presence of an excess of L. The kinetics of the electron transfer reaction observed when acetonitrile solutions of the complexes were reacted with a range of verdazyl radicals were monitored using stopped-flow spectrophotometry. Under the experimental conditions, the reactions were quite rapid and were monitored under second-order conditions. Marcus linear free energy plots indicated that the outer-sphere electron transfer reactions were non-adiabatic in nature. Nevertheless, application of the self-exchange rate constants of the verdazyl radicals, k11, and the tri-iron complexes, k22, to the Marcus cross-relation resulted in calculated values of the cross-reaction rate constant, k12, that were within a factor of five of the experimentally determined value.     

On the nature of the unusually long OO bond in HO(3) and HO(4) radicals

The HO(3) and HO(4) polyoxide radicals have attracted some attention due to their potential role in ozone chemistry. Experimentally, the geometrical structure of HO(3) is known whereas that of HO(4) is not. Moreover, the existence of the latter radical has been questioned. Theoretical calculations on the two species have been reported before, showing important structural differences depending on the computational level. Both radicals present an unusually long OO bond (around 1.7-1.8 A) that can be associated with an intricate interaction between HO, or HO(2), with O(2). The nature of such interaction is investigated in detail using large scale ab initio methods (CASSCF, CASPT2, MRCI, QCISD, CCSD(T)) and density functional techniques (B3LYP) in connection with extended basis sets. Stabilization enthalpies at 298 K with respect to HO (or HO(2)) and O(2) have been computed amounting to -3.21 kcal mol(-1) for HO(3) (trans conformation) and 11.33 kcal mol(-1) for HO(4) (cis conformation). The corresponding formation enthalpies are 6.12 and 11.83 kcal mol(-1). The trans conformation of HO(4) is less stable than the cis one by 6.17 kcal mol(-1). Transition states for HO(4) dissociation and for cis/trans conversion are also described.     

碳载氧化锰表面氧还原反应路径研究(英文)

氧还原反应(ORR)是一个复杂的过程,尤其在碱性电解液中,炭载型催化剂表面的ORR路径尤为复杂,因为碳本身可以催化ORR以二电子转移过程发生,产生过氧化氢,继而过氧化氢或者发生化学分解生成氧气(HODR),或者发生电化学还原生成OH(HORR).本文详细研究了ORR在常用氧化锰催化剂表面的反应路径.通过比较HODR和HORR的转换频率发现,尽管利用旋转环盘电极方法得到的表观电子转移数接近4,真实的ORR主要是2电子过程,反应生成的过氧化氢继而大部分发生化学分解生成氧气.该结果有助于理解碱性电解质中炭载型过渡金属氧化物电催化剂对ORR的催化行为.     

Radicals produced by gamma-irradiation of hyperquenched glassy water containing 2'-deoxyguanosine-5'-monophosphate

Hyperquenched glassy water (HGW) has been suggested as the best model for liquid water, to be used in low-temperature studies of indirect radiation effects on dissolved biomolecules (Bednarek et al. J. Am. Chem. Soc. 1996, 118, 9387). In the present work, these effects are examined by X-band electron spin resonance spectroscopy (ESR) in gamma-irradiated HGW matrix containing 2'-deoxyguanosine-5'-monophosphate. Analysis of the complex ESR spectra indicates that, in addition to OH(*) and HO2(*) radicals generated by water radiolysis, three species are trapped at 77 K:(i) G(C8)H(*) radical, the H-adduct to the double bond at C8; (ii) G(- *) radical anion, the product of electron scavenging by the aromatic ring of the base; and (iii) dR(-H)(*) radicals formed by H abstraction from the sugar moiety, predominantly at the C'5 position. We discuss the yields of the radicals, their thermal stability and transformations, as well as the effect of photobleaching. This study confirms our earlier suggestion that in HGW the H atom addition/abstraction products are created at 77 K in competition with HO2(*) radicals, in a concerted process following ionization of water molecule at L-type defect sites of the H-bonded matrix. The lack of OH(*) reactivity toward the solute suggests that the H-bonded structure in HGW is much more effective in recombining OH(*) radicals than that of aqueous glasses obtained from highly concentrated electrolyte solutions. Furthermore, complementary experiments for the neat matrix have provided evidence that HO2(*) radicals are not the product of H atom reaction with molecular oxygen, possibly generated by ultrasounds used in the process of sample preparation.     

The structures of ozone and HOx radicals in aqueous solution from combined quantum/classical molecular dynamics simulations

Ozone in aqueous solution decomposes through a complex mechanism that involves initial reaction with a hydroxide ion followed by formation of a variety of oxidizing species such as HO, HO(2), and HO(3) radicals. Though a number of hydrogen-bonded complexes have been described in the gas phase, both theoretically and experimentally, the structures of ozone and HO(x) in liquid water remain uncertain. In this work, combined quantum/classical computer simulations of aqueous solutions of these species have been reported. The results show that ozone undergoes noticeable electron polarization but it does not participate in hydrogen bonds with liquid water. The main contribution of the solvation energy comes from dispersion forces. In contrast, HO(x) radicals form strong hydrogen bonds. They are better proton donors but weaker proton acceptors than water. Their electronic and geometrical structures are significantly modified by the solvent, especially in the case of HO(3). In all cases, fluctuations in amplitudes of electronic properties are considerable, suggesting that solvent effects might play a crucial role on oxidation mechanisms initiated by ozone in liquid water. These mechanisms are important in a broad range of domains, such as atmospheric processes, plant response to ambient ozone, and medical and industrial applications.     

Gas-phase radical chemistry in the troposphere

Atmospheric free radicals are low concentration, relatively fast reacting species whose influence is felt throughout the atmosphere. Reactive radicals have a key role in maintaining a balanced atmospheric composition through their central function in controlling the oxidative capacity of the atmosphere. In this tutorial review, the chemistry of three main groups of atmospheric radicals HO(x), NO(x) and XO(x)(X = Cl, Br, I) are examined in terms of their sources, interconversions and sinks. Key examples of the chemistry are given for each group of radicals in their atmospheric context.     

Photodissociation of molecules of benzene and some of its derivatives in the liquid phase

The effect of intramolecular interactions on photodissociation has been studied. The quantum yields have been determined for the primary free radicals of benzene, its polymethyl-substituted derivatives Ph-(CH₃), and its monosubstituted Ph-(CH₂)-X derivatives, where X is a substituent containing a heteroatom. The conclusion made previously on the importance of singlet-singlet deactivation in nonradiative transitions of an excited molecule has been confirmed. The compounds Ph-(CH₂)-X have different photolytic stability on excitation by different normal vibrations within the limits of a single electron absorption band, A comparison of the spectral data with the photodissociation data for Ph-(CH₂)n-X enable us to propose that, depending on the nature of the intramolecular interactions, a transfer of both electron and vibrational excitation energy may take place from the ring to the substituent. This process is exceeded in the latter case by the conversion of electron excitation to vibrational excitation.We thank Professor Kh. S. Bagdasar'yan for his interest in the investigation and for discussion of the results.     

Gas-phase ion-molecule reactions using regioselectively generated radical cations to model oxidative damage and probe radical sites in peptides

Collision induced dissociation (CID) of sodiated peptide derivatives containing a nitrate ester functionality was used to regiospecifically generate three isomeric radicals of the model peptide Bz-Ala-Gly-OMe corresponding to radicals formed at: C(α) of the alanine residue [4+Na](+); C(α) of the glycine residue [5+Na](+); and the side chain of alanine [6+Na](+). The ion-molecule reactions of these peptide radicals were examined to model oxidative damage to peptides and to probe whether the radical sites maintain their integrity or whether they isomerise via intramolecular hydrogen atom transfer (HAT). Only [6+Na](+) is reactive towards O(2), forming the peroxyl radical [7+Na](+), which loses O(2), HO˙ and HO(2)˙ under CID. The radical ion [7 + Na](+) abstracts a hydrogen atom from 4-fluorothiophenol to form the hydroperoxide [8+Na](+), which upon CID fragments via the combined loss of HO˙ and CH(2)O. In contrast, all three of the isomeric sodiated radicals react with NO˙ and NO(2)˙ to form adducts. CID of the NO adducts only regenerates the radicals via NO˙ loss, thus providing no structural information. In contrast, CID of the NO(2) adducts gives rise to a range of product ions and the spectra are different for each of the three adducts, suggesting that the isomeric radicals [4+Na](+), [5+Na](+) and [6+Na](+) are produced as discrete species. Finally, CID of the NO(2) adducts was used to probe the rearrangement of the radicals [4+Na](+), [5+Na](+) and [6+Na](+) prior to their reaction with NO(2)˙: [6 + Na](+) rearranges to a mixture of [4+Na](+) and [5+Na](+) while [5+Na](+) rearranges to [4+Na](+).     

Reduction of Transient Histidine Radicals by Tyrosine: Influence of the Protonation State of Reactants

The role of tyrosine radicals as mediators of electron transfer reactions in enzymes is well established, as is the involvement of histidine as a binding partner. But how environmental factors affect these reactions remains poorly explored. In the study presented here, kinetic data on the influence of the protonation state of the reactants on the reduction of transient histidine radicals by tyrosine were obtained in neutral and basic aqueous solution (pH 6–12) using time-resolved chemically induced dynamic nuclear polarization (CIDNP). The histidine radicals were generated in the photo-induced reaction with the photosensitizer 3,3′,4,4′-tetracarboxy benzophenone. From model simulations of the detected CIDNP kinetics, pH dependent second-order rate constants of the reduction of histidine radicals were obtained for four possible combinations of the amino acids and their N-acetyl derivatives, and also for the systems histidine-phenylalanine dipeptide/N-acetyl tyrosine, and N-acetyl histidine/tyrosine-glutamine dipeptide. The pH dependences of the rate constant of the reduction reaction are explained accounting for the protonation states of reactants, and also protonation state of the equilibrium form of the product - reduced form of histidine radical, which is histidine with neutral or a positively charged imidazole.     

A density functional theory study of the mechanism of free radical generation in the system vanadate/PCA/H2O2

Experimental studies by Shul'pin and co-workers have shown that vanadate anions in combination with pyrazine-2-carboxylic acid (PCA identical with pcaH) produce an exceptionally active complex that promotes the oxidation of alkanes and other organic molecules. Reaction of this complex with H2O2 releases HOO* free radicals and generates V(IV) species, which are capable of generating HO* radicals by reaction with additional H2O2. The oxidation of alkanes is initiated by reaction with the HO* radicals. The mechanism of hydrocarbon oxidation with vanadate/PCA/H2O2 catalyst has been studied using density functional theory. The proposed model reproduces the major experimental observations. It is found that a vanadium complex with one pca (PCA identical with pcaH) and one H2O2 ligand is the precursor to the species responsible for HOO* generation. It is also found that species containing two pca ligands and an H2O2 molecule do not exist in the solution, in contradiction to previous interpretations of experimental observations. Calculated dependences of the oxidation rate on initial concentrations of PCA and H2O2 have characteristic maxima, the shapes of which are determined by the equilibrium concentration of the active species. Conversion of the precursors requires hydrogen transfer from H2O2 to a vanadyl group. Our calculations show that direct transfer has a higher barrier than pca-assisted indirect transfer. Indirect transfer occurs by migration of hydrogen from coordinated H2O2 to the oxygen of a pca ligand connected to the vanadium atom. The proposed mechanism demonstrates the important role of the cocatalyst in the reaction and explains why H2O2 complexes without pca are less active. Our work shows that the generation of HOO* radicals cannot occur via cleavage of a V-OOH bond in the complex formed directly from the precursors, as proposed before. The activation barrier for this process is too high. Instead, HOO* radicals are formed via a sequence of additional steps involving lower activation barriers. The new mechanism for free radical generation underestimates the observed rate of hexane oxidation by less than an order of magnitude; however, the calculated activation energy (67-81 kJ/mol) agrees well with that determined experimentally (63-80 kJ/mol).     

Formation of HO2 radicals from the 248 nm two-photon excitation of different aromatic hydrocarbons in the presence of O2

The excitation energy dependence of HO(2) radical formation from the 248 nm irradiation of four different aromatic hydrocarbons (benzene, toluene, o-xylene, and mesitylene) in the presence of O(2) has been studied. HO(2) has been monitored at 6638.20 cm(-1) by cw-CRDS, and the formation of a short-lived, unidentified species, showing broad-band absorption around the HO(2) absorption line, has been observed. For all four hydrocarbons, the same HO(2) formation pattern has been observed: HO(2) is formed immediately on our time scale after the excitation pulse, followed by a formation of more HO(2) on a much longer time scale. Taking into account the absorption of the short-lived species, the yields of both types of HO(2) radicals are in agreement with a formation following 2-photon absorption by the aromatic hydrocarbons. The yields do not much depend on the nature of the aromatic hydrocarbon. For practical use in past and future experiments on aromatic hydrocarbons, an empirical value is given, allowing the estimation of the total concentration of HO(2) radicals formed at 40 Torr He in the presence of around [O(2)] = 1 × 10(17)cm(-3) as a function of the 248 nm excitation energy: [HO(2)]/[aromatic hydrocarbon] ≈ 2 × 10(-6) × E(2) (with E in mJ cm(-2)).     

Oxidation of ethyne and But-2-yne. 2. Master equation simulations

The aim of this study is to improve understanding of the tropospheric oxidation of ethyne (acetylene, C2H2) and but-2-yne, which takes place in the presence of HO and O2. The details of the potential energy hypersurface have been discussed in a previous article [Maranzana et al., J. Phys. Chem. A 2008, 112, XXXX]. For both molecules, the initial addition of HO radical to the triple bond is followed by addition of O2 to form peroxyl radicals. In both reaction systems, the peroxyl radicals take two isomeric forms, E1 and E2 for ethyne and e1 and e2 for but-2-yne. Energy transfer parameters (alpha = 250 cm-1) for the ethyne system were obtained by simulating laboratory data for N2 buffer gas, where O2 was not present. In simulations of C2H2 + HO when O2 is present, E1 reacts completely and E2 reacts almost completely, before thermalization. Radical E1 produces formic acid ( approximately 44%) and E2 gives glyoxal ( approximately 53%), in quite good agreement with experiments. For but-2-yne, pressure-dependent laboratory data are too scarce to obtain energy transfer parameters directly, so simulations were carried out for a range of values: alpha = 200-900 cm-1. Excellent agreement with the available experimental yields at atmospheric pressure was obtained with alpha = 900 cm-1. Two reaction channels are responsible for acetic acid formation, but one is clearly dominant. Biacetyl is produced by reactions of e1 and, to a minor extent, e2. The peroxyl radical e2 leads to less than 8% of all products. Vinoxyl radical (which has been reported in experiments involving C2H2 + HO) and products of its reactions are predicted to be negligible under atmospheric conditions.     

The Stability of Cα Peptide Radicals: Why Glycyl Radical Enzymes?

The conformational space of dipeptide models derived from glycine, alanine, phenylalanine, proline, tyrosine, and cysteine has been searched extensively and compared with the corresponding C(α) dipeptide radicals at the G3(MP2)-RAD level of theory. The results indicate that the (least-substituted) glycine dipeptide radical is the thermochemically most stable of these species. Analysis of the structural parameters indicates that this is due to repulsive interactions between the C(α) substituents and peptide units in the radical. A comparison of the conformational preferences of dipeptide radicals and their closed-shell parents also indicates that radical stability is a strongly conformation-dependent property.