Test‐Strip‐Based Fluorometric Detection of Fluoride in Aqueous Media with a BODIPY‐Linked Hydrogen‐Bonding Receptor

The measurement of biologically relevant anions, such as fluoride, is an important task in analytical chemistry, in particular, for dental health and osteoporosis. Although a large number of fluoride probes are known, the applicability under relevant conditions is limited to a few examples. To improve this situation, BODIPY‐amidothiourea dyes with varying hydrogen‐bond donating strengths were developed, the most H‐acidic of which ( 1 c ) could detect F^? from an inorganic source (NaF) in 50 % aqueous solution (DMSO/water 1:1, v/v) with 0.01 ppm sensitivity through selective fluorescence quenching by a photoinduced electron‐transfer (PET) process. Use of the probe and a reference dye with a test‐strip assay and a portable and rapidly recording lateral‐flow fluorescence reader made determination of F^? in neat aqueous solutions, such as spiked water samples and toothpaste extracts, possible in a self‐referenced manner, achieving a detection limit of 0.2 ppm.     

Ab initio investigation of benzene clusters: molecular tailoring approach

An exhaustive study on the clusters of benzene (Bz)(n), n = 2-8, at MP2/6-31++G(??) level of theory is reported. The relative strengths of CH-π and π-π interactions in these aggregates are examined, which eventually govern the pattern of cluster formation. A linear scaling method, viz., molecular tailoring approach (MTA), is efficiently employed for studying the energetics and growth patterns of benzene clusters consisting up to eight benzene (Bz) units. Accuracy of MTA-based calculations is appraised by performing the corresponding standard calculations wherever possible, i.e., up to tetramers. For benzene tetramers, the error introduced in energy is of the order of 0.1 mH (～0.06 kcal/mol). Although for higher clusters the error may build up, further corrections based on many-body interaction energy analysis substantially reduce the error in the MTA-estimate. This is demonstrated for a prototypical case of benzene hexamer. A systematic way of building up a cluster of n monomers (n-mer) which employs molecular electrostatic potential of an (n-1)-mer is illustrated. The trends obtained using MTA method are essentially identical to those of the standard methods in terms of structure and energy. In summary, this study clearly brings out the possibility of effecting such large calculations, which are not possible conventionally, by the use of MTA without a significant loss of accuracy.     

A theoretical study on structural, spectroscopic and energetic properties of acetamide clusters [CH3CONH2] (n=1-15)

Insights into the formation of hydrogen bonded clusters are of outstanding importance and quantum chemical calculations play a pivotal role in achieving this understanding. Structure and energetic comparison of linear, circular and standard forms of (acetamide)(n) clusters (n = 1-15) at the B3LYP/D95** level of theory including empirical dispersion correction reveals significant cooperativity of hydrogen bonding and size dependent structural preference. A substantial amount of impact of BSSE is observed in these calculations as the cluster size increases irrespective of the kind of arrangement. The interaction energy per monomer increases from dimer to 15mer by 90% in the case of the circular arrangement, by 76% in the case of the linear arrangement and by 34% in the case of the standard arrangement respectively. The cooperativity in hydrogen bonding is also manifested by a regular decrease in average OH and C-N bond distances, while average C=O and N-H bond lengths increase with increasing cluster size. Atoms-In-Molecules (AIM) analysis is used to characterize the nature of hydrogen bonding between the acetamide molecules in the cluster on the basis of electron density (ρ) values obtained at the bond critical point. An analysis of N-H bond stretching frequencies as a function of the cluster size shows a marked red shift as the cluster size increases from 1 to 15.     

Highly selective, sensitive and quantitative detection of Hg2+ in aqueous medium under broad pH range

Amidothiourea linked acridinedione derivatives selectively detect Hg(2+) in unbuffered aqueous solution under broad pH range with both single- and two-photon excitation. The observed linear fluorescence intensity change allows the quantitative detection of Hg(2+) in the concentration range of 22 nM-0.33 μM with the lower detection limit of 2 nM.     

First principles study and database analyses of structural preferences for sodium ion (Na+) solvation and coordination

Extensive computations were performed on aqueous clusters of monovalent sodium cation [Na⁺(H₂O) _n ; (n = 1–20)] using MP2/cc-pVTZ and density functional theory. The structure, energy, and coordination number (CN) preference of a large number of competing conformations of different complexes have been explored. For complexes up to n = 12, the CN 4 is most preferred while 5, 6 CNs are favored in case of larger complexes containing up to 20 water molecules. These results are in very good agreement with experimental observations. The strength of hydrogen bonding among the waters coordinated to the Na⁺ ion is found to play a major role in the stability of the complexes. The varying preferences for CN of Na⁺ ion were explored by screening two important databases: Protein Databank and Cambridge Structural Database. A linear correlation is observed between the M (Metal)–O distance and the charge on metal ion in complex with the increase in CN of metal ion.     

Head‐to‐Tail Intermolecular Hydrogen Bonding of OH and NH Groups with Fluoride

To explore the anion‐recognition ability of the phenolic hydroxyl group and the amino hydrogen, we synthesized three different acridinedione (ADD) based anion receptors, 1 , 2 and 3 , having OH, NH, and combination of OH and NH groups, respectively. Absorption, emission and ¹H NMR spectral studies revealed that receptor 1 , having only a phenolic OH group, shows selective deprotonation of the hydroxyl proton towards F^?, which results in an “ON–OFF”‐type signal in the fluorescence spectral studies. Receptor 2 , which only has an amino hydrogen, also shows deprotonation of the amino hydrogen with F^?, whereas receptor 3 (having both OH and NH groups) shows head‐to‐tail intermolecular hydrogen bonding of OH and NH groups with F^? prior to deprotonation. The observation of hydrogen bonding of the OH and NH groups in a combined solution of 1 and 2 with F^? in a head‐to‐tail hetero‐intermolecular fashion, and the absence of head‐to‐head and tail‐to‐tail intermolecular hydrogen bonding in 1 and 2 with F^?, prove that the difference in the acidity of the OH and NH protons leads to the formation of an intermolecular hydrogen‐bonding complex with F^? prior to deprotonation. The presence of this hydrogen‐bonding complex was confirmed by absorption spectroscopy, 3D emission contour studies, and ¹H NMR titration.     

Mini review on the performance of Schiff base and their metal complexes as photosensitizers in dye-sensitized solar cells

Abstract

For the requirement of clean and efficient energy, research toward the improvement of solar energy is increased because it directly converts the sunlight into electrical energy leaving no harmful effect on the environment. Dye-sensitized solar cells (DSSCs) are one of the best alternative approaches to conventional solar cells. The photosensitizer is one of the important components in DSSC and plays a key role to initiate the electrochemical process for electricity production by harvesting visible light. The power conversion efficiency of DSSC is typically based on the dye/sensitizer which is coated on the porous semiconductor TiO₂ film. Schiff base metal complexes have potential photosensitizing behavior, due to their photophysical properties. This article presents the current development attained in the designing and synthesis of Schiff base metal complexes and their application as photosensitizers and also co-sensitizers in dye-sensitized solar cells, and recent developments on the DSSC using Schiff based metal complexes.     

Analyzing coordination preferences of Mg2+ complexes: insights from computational and database study

Solvation of metal cations has attracted substantial interest on account of its functional importance in biological systems. In the present study, we undertake a comprehensive analysis of hydrated complexes of Mg²⁺ with up to 20 water molecules using MP2/cc-pVTZ and density functional theory (DFT) calculations. The effect of first, second, and higher solvation shells on magnesium coordination has been systematically analyzed by considering Mg²⁺(H₂O) _n complexes. Numerous competing conformations for each of the metal ion complexes have been explored and the minima structures obtained were further analyzed. The study probes the relative preferences among various coordination numbers and unambiguously establishes that coordination number 6 is the most optimal choice. The relative abundance of Mg²⁺ ion and its coordination with water and other ligands has been analyzed in the Protein Data Bank and Cambridge Structural Database. It is noted that the M–O distance and charge transfer to metal ion increase as the number of solvating water molecules increases. The computational studies are in excellent agreement with the experimental observations, and provide support to multiple coordinate site preferences for Mg²⁺.     

Modulation of hydrogen bonding upon ion binding: Insights into cooperativity

The impact due to the of presence of ions, such as Mg²⁺, Na⁺, H⁺, Cl^?, and OH^? on hydrogen bonded clusters of increasing size (water, formamide, and acetamide [n = 1–10]) in the context of associated cooperativity has been explored using density functinal theory (DFT) calculations. Sequential binding energies (SBE) rise on addition of monomer in case of parent clusters. SBE for ionic clusters are several times higher than that of parent clusters initially. This behavior is more dramatic on addition of either Mg²⁺ or H⁺ compared to other ions. Interestingly, SBE of both parent and ionic clusters approach nearly uniform values beyond n = 6 irrespective of kind of ion present in the cluster with the exception of magnesium. © 2013 Wiley Periodicals, Inc.     

Fluorogenic Squaraine Dendrimers for Background-Free Imaging of Integrin Receptors in Cancer Cells

To overcome the limited brightness of existing fluorogenic molecular probes for biomolecular targets, we introduce a concept of fluorogenic dendrimer probe, which undergoes polarity-dependent switching due to intramolecular aggregation-caused quenching of its fluorophores. Based on a rational design of dendrimers with four and eight squaraine dyes, we found that octamer bearing dyes through a sufficiently long PEG(8) linker displays >400-fold fluorescence enhancement from water to non-polar dioxane. High extinction coefficient (≈2,300,000 m ⁻¹ cm⁻¹) resulted from eight squaraine dyes and quantum yield (≈25 %) make this octamer the brightest environment-sensitive fluorogenic molecule reported to date. Its conjugate with cyclic RGD used at low concentration (3 nm ) enables integrin-specific fluorescence imaging of cancer cells with high signal-to-background ratio. The developed dendrimer probe is a “golden middle” between molecular probes and nanoparticles, combining small size, turn-on response and high brightness, important for bioimaging.