In vacuo reduction of silver orthophosphate with graphite for high‐precision oxygen isotope analysis

The reduction of silver phosphate with graphite under vacuum conditions was studied at final reaction temperatures varying from 430 to 915°C to determine: (i) the CO₂ extraction yield, and (ii) the oxygen isotopic composition of CO₂. The CO₂ yield and oxygen isotopic composition were determined on a calibrated dual inlet and triple collector isotope ratio mass spectrometer. We observed the following three stages of the reduction process. (1) At temperatures below 590°C only CO₂ is formed, while silver orthophosphate decays to pyrophosphate. (2) At higher temperatures, 590–830°C, predominantly CO is formed from silver pyrophosphate which decays to metaphosphate; this CO was always converted into CO₂ by the glow discharge method. (3) At temperatures above 830°C the noticeable sublimation of silver orthophosphate occurs. This observation was accompanied by the oxygen isotope analysis of the obtained CO₂. The measured δ¹⁸O value varied from ?11.93‰ (at the lowest temperature) to ?20.32‰ (at the highest temperature). The optimum reduction temperature range was found to be 780–830°C. In this temperature range the oxygen isotopic composition of CO₂ is nearly constant and the reaction efficiency is relatively high. The determined difference between the δ¹⁸O value of oxygen in silver phosphate and that in CO₂ extracted from this phosphate is +0.70‰. Copyright © 2010 John Wiley & Sons, Ltd.     

Thermoplastic blend demixing by a high‐pressure,high‐temperature process

The analysis of a thermoplastic polymer blend requires a precise separation of the blend components, which is usually performed by selective solvent extraction. However, when the components are high‐molecular‐weight polymers, a complete separation is very difficult. The use of fluids in near critical and supercritical conditions becomes a promising alternative to reach a much more precise separation. In this work, a method to separate reactive and physical blends from high‐molecular‐weight commercial polymers is proposed. Polyethylene (PE)/polystyrene (PS) blends were separated into their components with n‐propane, n‐pentane, and n‐heptane at near critical and supercritical conditions. The selectivity of each solvent was experimentally studied over a wide range of temperatures for assessing the processing windows for the separation of pure components. The entire PE phase was solubilized by n‐pentane and n‐heptane at similar temperatures, whereas propane at supercritical conditions could not dissolve the fraction of high‐molecular‐weight PE. The influence of the blend morphology and composition on the efficiency of the polymer separation was studied. In reactive blends, the in situ copolymer formed was solubilized with the PE phase by chemical affinity. The method proposed for blend separation is easy, rapid, and selective and seems to be a promising tool for blend separation, particularly for reactive blends, for which the isolation of the copolymer is essential for characterization © 2005 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 2361–2369, 2005     

VinaMPI: Facilitating multiple receptor high‐throughput virtual docking on high‐performance computers

The program VinaMPI has been developed to enable massively large virtual drug screens on leadership‐class computing resources, using a large number of cores to decrease the time‐to‐completion of the screen. VinaMPI is a massively parallel Message Passing Interface (MPI) program based on the multithreaded virtual docking program AutodockVina, and is used to distribute tasks while multithreading is used to speed‐up individual docking tasks. VinaMPI uses a distribution scheme in which tasks are evenly distributed to the workers based on the complexity of each task, as defined by the number of rotatable bonds in each chemical compound investigated. VinaMPI efficiently handles multiple proteins in a ligand screen, allowing for high‐throughput inverse docking that presents new opportunities for improving the efficiency of the drug discovery pipeline. VinaMPI successfully ran on 84,672 cores with a continual decrease in job completion time with increasing core count. The ratio of the number of tasks in a screening to the number of workers should be at least around 100 in order to have a good load balance and an optimal job completion time. The code is freely available and downloadable. Instructions for downloading and using the code are provided in the Supporting Information. © 2013 Wiley Periodicals, Inc.     

Shapeable matrix‐free Spectra® fiber‐reinforced polymeric composites via high‐temperature high‐pressure sintering: Process‐structure‐property relationship

In an exploratory effort to find a new way to make high‐performance composites used in ballistic protective applications, matrix‐free Spectra® fiber‐reinforced polymeric composites are produced via a novel processing method called high‐temperature high‐pressure sintering. Mechanical testing at ambient and elevated temperatures proves that the fibers can maintain their properties after processing. The characteristics and properties of the final products vary with different processing conditions. Their microstructure and morphology were investigated using SEM and WAXD. Their mechanical properties, including interlayer adhesion, rigidity, and ballistic performance, were measured and compared with those of the conventional composites. The sintering mechanism is proposed and verified. Spectra cloth is capable of being shaped to produce complex double curvatures by a thermoforming process, using a simple hemispherical mold. Success in different molding sequences and procedures shows the versatility in manufacturing. The theoretical background for the thermoformability is explained in terms of molecular interaction, microstructure, and morphology. Selective thermomechanical properties of the molded structures were measured. By combining the knowledge and information from the aforementioned studies, the process‐structure‐property relationship is established, which gives in‐depth and better understanding of this unique high‐temperature high‐pressure sintering process for consolidating Spectra cloth. © 2005 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 2767–2789, 2005     

A system for high‐quality CO2 isotope analyses of air samples collected by the CARIBIC Airbus A340‐600

In 2007, JRC‐IRMM began a series of atmospheric CO₂ isotope measurements, with the focus on understanding instrumental effects, corrections as well as metrological aspects. The calibration approach at JRC‐IRMM is based on use of a plain CO₂ sample (working reference CO₂) as a calibration carrier and CO₂‐air mixtures (in high‐pressure cylinders) to determine the method‐related correction under actual analytical conditions (another calibration carrier, in the same form as the samples). Although this approach differs from that in other laboratories, it does give a direct link to the primary reference NBS‐19‐CO₂. It also helps to investigate the magnitude and nature for each of the instrumental corrections and allows for the quantification of the uncertainty introduced. Critical tests were focused on the instrumental corrections. It was confirmed that the use of non‐symmetrical capillary crimping (an approach used here to deal with small samples) systematically modifies δ¹³C(CO₂) and δ¹⁸O(CO₂), with a clear dependence on the amount of extracted CO₂. However, the calibration of CO₂‐air mixtures required the use of the symmetrical dual‐inlet mode. As a proof of our approach, we found that δ¹³C(CO₂) on extracts from mixtures agreed (within 0.010‰) with values obtained from the ‘mother’ CO₂ used for the mixtures. It was further found that very low levels of hydrocarbons in the pumping systems and the isotope ratio mass spectrometry (IRMS) instrument itself were critical. The m/z 46 values (consequently the calculated δ¹⁸O(CO₂) values) are affected by several other effects with traces of air co‐trapped with frozen CO₂ being the most critical. A careful cryo‐distillation of the extracted CO₂ is recommended. After extensive testing, optimisation, and routine automated use, the system was found to give precise data on air samples that can be traced with confidence to the primary standards. The typical total combined uncertainty in δ¹³C(CO₂) and δ¹⁸O(CO₂) on the VPDB‐CO₂ scale, estimated on runs of CO₂‐air mixtures, is ±0.040‰ and 0.060‰ (2‐σ values). Inter‐comparison with MPI‐BGC resulted in a scale discrepancy of a similar magnitude. Although the reason(s) for this discrepancy still need to be understood, this basically confirms the approach of using specifically prepared CO₂‐air mixtures as a calibration carrier, in order to achieve scale unification among laboratories. As important practical application and as a critical test, JRC‐IRMM took part in the passenger aircraft‐based global monitoring project CARIBIC ( http://www.caribic‐atmospheric.com ). In this way, reliable CO₂ isotope data for the tropopause region and the free troposphere were obtained. From June 2007 to January 2009, approximately 500 CARIBIC air samples have been analysed. Some flights demonstrated a compact correlation of both δ¹³C(CO₂) and δ¹⁸O(CO₂) with respect to CO₂ concentration, demonstrating mixing of tropospheric and stratospheric air masses. These excellent correlations provide an independent, realistic data quality check. Copyright © 2009 John Wiley & Sons, Ltd.     

Simultaneous detection of multiple hydroxylated polychlorinated biphenyls from biological samples using ultra‐high‐performance liquid chromatography with isotope dilution tandem mass spectrometry

We established a method for the separation and detection of nine hydroxylated polychlorinated biphenyls in whole blood and urine samples using ultra high performance liquid chromatography coupled with electrospray negative ionization tandem mass spectrometry. Clean‐up procedures involved a filtration step, and optimization involved a pretreatment step consisting of a simple liquid–liquid extraction using hydrated silica‐gel chromatography (5%). Nine hydroxylated polychlorinated biphenyls were separated on an ultra high performance liquid chromatography HSS T3 column using a gradient elution program of 2 mmol ammonium formate aqueous solution (A) and methanol (B). Recovery ranged from 84.0 to 105.4% for the nine different hydroxylated polychlorinated biphenyls in urine with three spiked levels of 0.1, 1, and 2 ng and from 73.5 to 98.6% for the blood with spiked levels of 0.2, 1, and 2 ng. The relative standard deviations were <8.7% (n = 6), and the limits of detection in urine and whole blood for the nine hydroxylated polychlorinated biphenyls were in the range of 1.5–4 and 20–100 pg/g, respectively. This analytical method may enable the simultaneous detection of various hydroxylated polychlorinated biphenyls from complex tissue matrices.     

Multiple‐injection high‐throughput gas chromatography analysis

Multiple‐injection techniques have been shown to be a simple way to perform high‐throughput analysis where the entire experiment resides in a single chromatogram, simplifying the data analysis and interpretation. In this study, multiple‐injection techniques are applied to gas chromatography with flame ionization detection and mass detection to significantly increase sample throughput. The unique issues of implementing a traditional “Fast” injection mode of multiple‐injection techniques with gas chromatography and mass spectrometry are discussed. Stacked injections are also discussed as means to increase the throughput of longer methods where mass detection is unable to distinguish between analytes of the same mass and longer retentions are required to resolve components of interest. Multiple‐injection techniques are shown to increase instrument throughput by up to 70% and to simplify data analysis, allowing hits in multiple parallel experiments to be identified easily.     

Monitoring phase transition of aqueous biomass model substrates by high‐pressure and high‐temperature microfluidics

Aqueous‐Phase Reforming (APR) is a promising hydrogen production method, where biomass is catalytically reformed under high pressure and high temperature reaction conditions. To eventually study APR, in this paper, we report a high‐pressure and high‐temperature microfluidic platform that can withstand temperatures up to 200°C and pressures up to 30 bar. As a first step, we studied the phase transition of four typical APR biomass model solutions, consisting of 10 wt% of ethylene glycol, glycerol, xylose or xylitol in MilliQ water. After calibration of the set‐up using pure MilliQ water, a small increase in boiling point was observed for the ethylene glycol, xylitol and xylose solutions compared to pure water. Phase transition occurred through either explosive or nucleate boiling mechanisms, which was monitored in real‐time in our microfluidic device. In case of nucleate boiling, the nucleation site could be controlled by exploiting the pressure drop along the microfluidic channel. Depending on the void fraction, various multiphase flow patterns were observed simultaneously. Altogether, this study will not only help to distinguish between bubbles resulting from a phase transition and/or APR product formation, but is also important from a heat and mass transport perspective.     

Ultra‐high‐pressure‐assisted extraction of wedelolactone and isodemethylwedelolactone from Ecliptae Herba and purification by high‐speed counter‐current chromatography

Ultra‐high‐pressure extraction combined with high‐speed counter‐current chromatography was employed to extract and purify wedelolactone and isodemethylwedelolactone from Ecliptae Herba. The operating conditions of ultra‐high‐pressure extraction were optimized using an orthogonal experimental design. The optimal conditions were 80% aqueous methanol solvent, 200 MPa pressure, 3 min extraction time and 1:20 (g/mL) solid–liquid ratio for extraction of wedelolactone and isodemethylwedelolactone. After extraction by ultra‐high pressure, the extraction solution was concentrated and subsequently extracted with ethyl acetate; a total of 2.1 g of crude sample was obtained from 100 g of Ecliptae Herba. A two‐phase solvent system composed of petroleum ether–ethyl acetate–methanol–water (3:7:5:5, v/v) was used for high‐speed counter‐current chromatography separation, by which 23.5 mg wedelolactone, 6.8 mg isodemethylwedelolactone and 5.5 mg luteolin with purities >95% were purified from 300 mg crude sample in a one‐step separation. This research demonstrated that ultra‐high‐pressure extraction combined with high‐speed counter‐current chromatography was an efficient technique for the extraction and purification of coumestans from plant material.     

Use of stable isotope labeled probes to facilitate liquid chromatography/mass spectrometry based high‐throughput screening of time‐dependent CYP inhibitors

Inhibition curve shift is a commonly used approach for screening of time‐dependent CYP inhibitors which requires parallel paired incubations to obtain two inhibition curves for comparison. For the control incubation, a test compound is co‐incubated with a probe substrate in human liver microsomes (HLM) fortified with NADPH; for the time‐dependent incubation (TDI), the test compound is pre‐incubated with NADPH‐fortified HLM followed by a secondary incubation with a probe substrate. For both incubations, enzyme activity is measured respectively by liquid chromatography/tandem mass spectrometry (LC/MS/MS) analysis of the CYP‐specific metabolite, and a TDI inhibitor can be readily identified by inhibition curve shifting as a result of CYP inactivation by the test compound during the pre‐incubation. In the present study, we describe an alternative approach to facilitate TDI screening in which stable isotope labeled CYP‐specific probes are used for the TDI, and non‐labeled substrates are included in the control incubation. Because CYP‐specific metabolites produced in the TDI are stable isotope labeled, two sets of incubation samples can be combined and then simultaneously analyzed by LC/MS/MS in the same batch run to reduce the run time. This new method has been extensively validated using both a number of known competitive and TDI inhibitors specific to five most common CYPs such as 1A2, 2C9, 2C19, 2D6, and 3A4. The assay is performed in a 96‐well format and can be fully automated. Compared to the traditional method, this approach in combination with sample pooling and a short LC/MS/MS gradient significantly enhances the throughput of TDI screening and thus can be easily implemented in drug discovery to evaluate a large number of compounds without adding additional resource. Copyright © 2010 John Wiley & Sons, Ltd.