Label‐Free Molecular Imaging of Biological Cells and Tissues by Linear and Nonlinear Raman Spectroscopic Approaches

Raman spectroscopy is an emerging technique in bioanalysis and imaging of biomaterials owing to its unique capability of generating spectroscopic fingerprints. Imaging cells and tissues by Raman microspectroscopy represents a nondestructive and label‐free approach. All components of cells or tissues contribute to the Raman signals, giving rise to complex spectral signatures. Resonance Raman scattering and surface‐enhanced Raman scattering can be used to enhance the signals and reduce the spectral complexity. Raman‐active labels can be introduced to increase specificity and multimodality. In addition, nonlinear coherent Raman scattering methods offer higher sensitivities, which enable the rapid imaging of larger sampling areas. Finally, fiber‐based imaging techniques pave the way towards in vivo applications of Raman spectroscopy. This Review summarizes the basic principles behind medical Raman imaging and its progress since 2012.     

Raman Imaging: An Impending Approach Towards Cancer Diagnosis

In accordance with the recent studies, Raman spectroscopy is well experimented as a highly sensitive analytical and imaging technique in biomedical research, mainly for various disease diagnosis including cancer. In comparison with other imaging modalities, Raman spectroscopy facilitate numerous assistances owing to its low background signal, immense spatial resolution, high chemical specificity, multiplexing capability, excellent photo stability and non-invasive detection capability. In cancer diagnosis Raman imaging intervened as a promising investigative tool to provide molecular level information to differentiate the cancerous vs non-cancerous cells, tissues and even in body fluids. Anciently, spontaneous Raman scattering is very feeble due to its low signal intensity and long acquisition time but new advanced techniques like coherent Raman scattering (CRS) and surface enhanced Raman scattering (SERS) gradually superseded these issues. So, the present review focuses on the recent developments and applications of Raman spectroscopy-based imaging techniques for cancer diagnosis.     

Applications of Vibrational Spectroscopy for Analysis of Connective Tissues

Advances in vibrational spectroscopy have propelled new insights into the molecular composition and structure of biological tissues. In this review, we discuss common modalities and techniques of vibrational spectroscopy, and present key examples to illustrate how they have been applied to enrich the assessment of connective tissues. In particular, we focus on applications of Fourier transform infrared (FTIR), near infrared (NIR) and Raman spectroscopy to assess cartilage and bone properties. We present strengths and limitations of each approach and discuss how the combination of spectrometers with microscopes (hyperspectral imaging) and fiber optic probes have greatly advanced their biomedical applications. We show how these modalities may be used to evaluate virtually any type of sample (ex vivo, in situ or in vivo) and how “spectral fingerprints” can be interpreted to quantify outcomes related to tissue composition and quality. We highlight the unparalleled advantage of vibrational spectroscopy as a label-free and often nondestructive approach to assess properties of the extracellular matrix (ECM) associated with normal, developing, aging, pathological and treated tissues. We believe this review will assist readers not only in better understanding applications of FTIR, NIR and Raman spectroscopy, but also in implementing these approaches for their own research projects.     

表面增强拉曼光谱:应用和发展

表面增强拉曼光谱技术(Surface-enhanced Raman spectroscopy,SERS)是一种具有超高灵敏度的指纹光谱技术,目前已广泛应用于表面科学、材料科学、生物医学、药物分析、食品安全、环境检测等领域,是一种极具潜力的痕量分析技术。 本文对SERS技术及相关的针尖增强拉曼光谱(Tip-enhanced Raman spectroscopy,TERS),壳层隔绝纳米粒子增强拉曼光谱(Shell-isolated nanoparticle-enhanced Raman spectroscopy,SHINERS)技术的发展及应用进行了综合评述,并探讨了其未来的研究热点及发展方向。     

Methods for extracting biochemical information from bacterial Raman spectra: focus on a group of structurally similar biomolecules--fatty acids

In this paper we explore the possibilities of Raman spectroscopy in order to deduce information on the fatty acid composition of bacterial cells. Therefore, representative strains of two bacterial taxa were each cultured in different conditions and in parallel analyzed by Raman spectroscopy and gaschromatographic FAME analysis. Raman spectra of pure fatty acids were recorded and used as reference spectra. The culturing conditions for each strain could be easily distinguished by the fatty acid information retrieved from bacterial Raman spectra. Chemometric techniques such as EMSC and PCA allowed to extract information about groups of fatty acids, that was consistent with the results from FAME analysis. Although the information retrieved from Raman spectroscopy is not as refined as that from FAME analysis, the presented methods could be useful to obtain basic information on the fatty acid present in bacteria when performing Raman spectroscopic analysis for fast whole cell profiling, which provides information for different types of cell components (fatty acids, amino acids, primary metabolites, etc.).     

虚拟分子印迹与表面增强拉曼散射联用技术用于孔雀石绿的超灵敏检测

采用抗坏血酸还原法制备Ag球粒子,然后用3-（甲基丙烯酰氧）丙基三甲氧基硅烷使其表面硅烷化,最后用虚拟模板分子松香酸代替模板分子孔雀石绿与功能单体甲基丙烯酰胺反应合成虚拟印迹聚合物.结果表明,生成的"核-壳"式复合基底比Ag的表面增强拉曼散射（SERS）增强效果显著,其对孔雀石绿的最低检测浓度达到10^-11 mol/L.该方法实现了背景噪音的消除,提高了分析结果的准确性,为有机染料的超灵敏检测提供了参考.     

Surface-enhanced femtosecond CARS spectroscopy (SE-CARS) on pyridine

Surface-enhanced Raman scattering (SERS) has become an integral part of spectroscopy. The inelastic scattering process is enhanced by several orders of magnitude when molecules are in close contact to nano-structured coin metals. However, the use of surface enhancement in combination with nonlinear spectroscopy is by far not as common as in linear spectroscopy even though a more drastic effect could be expected. In our work, we report the observations we made from the preliminary studies on surface enhancement mechanisms in combination with coherent anti-Stokes Raman scattering (CARS) using femtosecond laser pulses. Silver colloids were used as enhancement medium. Molecules, which show conventional SERS were selected for the experiments. Femtosecond CARS was performed on these molecular systems in the presence and absence of silver colloids. The scattered CARS signal was collected both in the forward and sideward directions. From the analysis of the results general observations were made about the factors affecting the performance of SE-CARS.     

Analysis of human tear fluid by Raman spectroscopy

Tear fluid is a complex aqueous solution containing proteins, metabolites, electrolytes and lipids. This study uses Raman spectroscopy to analyse the composition of human tear fluid from three healthy volunteers. Two different methods are used to obtain Raman spectra from the 3 μL tear samples: (i) solution-phase Raman spectroscopy, and (ii) drop coating deposition Raman spectroscopy (DCDRS). Tear samples were either basal fluid, or yawn reflex secreted fluid. Calibration of the solution technique with standard protein solutions (5-15 mg mL⁻¹) showed that this method could predict the protein concentration (cross-validation) with an error of less than 1 mg mL⁻¹. The Raman signals from the tear fluid were very weak but signals due to protein and urea were clearly observable in all samples. The drop coating deposition technique was shown to produce very high signal-to-noise spectra for relatively short acquisition times, and small sample volumes. Raman point mapping combined with principal components analysis showed that the protein, urea, bicarbonate and lipid could all be detected in the tear samples and that the distribution of these components was inhomogeneous. Their position within the drying pattern was shown to depend on their relative solubilities. The results of this study suggest that solution Raman measurements may be calibrated to give the total tear protein concentration and DCDRS could be used to give a fingerprint of the tear protein (and lipid) composition.     

FT-Raman spectroscopic studies of guarana and some extracts

The Raman spectrum of guarana, an important product of the Amazonian rain forest, has been investigated; the therapeutic properties of guarana and it's extracts have been realised for some time and have been attributed to guaranine, which could be a complex of caffeine and tannins or to a new xanthine natural product. The purpose of this study is two-fold: firstly, to provide molecular structural information about guarana seeds and their extracts and, secondly, to test the viability of using the technique as a method of verification of genuine guarana extracts from synthetic composites. Raman spectroscopy shows that the composition of the guarana is very similar for the whole seed and for the outer and inner portions of the dissected seed, which are closely similar also to the ground commercial powders produced in the Amazon for the distributors. The results indicate that Fourier-transform Raman spectroscopy could be used for the monitoring of quality control of guarana products in the phytopharmaceutical industry.     

Coherent anti-Stokes Raman Scattering Microscopy.

Coherent anti-Stokes Raman scattering (CARS) microscopy is presented as a new nonlinear optical technique. The combination of vibrational spectroscopy and microscopy allows highly sensitive investigations of unlabelled samples. CARS is an ideal tool for studying a broad variety of samples. The main drawback of the technique is its non-zero-background nature, which implies that the signal has to be detected against a nonresonant background. The need to solve this problem is reflected in the rapid technological developments that have been observed during the last decade. Recent results show that CARS microscopy has the potential to become an important complementary technique that can be used with other well-established microscopic methods. Although it has some limitations, it offers unique access to many problems that cannot be tackled with conventional techniques. For this reason, it can be expected that the impressive growth of the field will continue.     

Monitoring cell culture media degradation using surface enhanced Raman scattering (SERS) spectroscopy

The quality of the cell culture media used in biopharmaceutical manufacturing is a crucial factor affecting bioprocess performance and the quality of the final product. Due to their complex composition these media are inherently unstable, and significant compositional variations can occur particularly when in the prepared liquid state. For example photo-degradation of cell culture media can have adverse effects on cell viability and thus process performance. There is therefore, from quality control, quality assurance and process management view points, an urgent demand for the development of rapid and inexpensive tools for the stability monitoring of these complex mixtures. Spectroscopic methods, based on fluorescence or Raman measurements, have now become viable alternatives to more time-consuming and expensive (on a unit analysis cost) chromatographic and/or mass spectrometry based methods for routine analysis of media. Here we demonstrate the application of surface enhanced Raman scattering (SERS) spectroscopy for the simple, fast, analysis of cell culture media degradation. Once stringent reproducibility controls are implemented, chemometric data analysis methods can then be used to rapidly monitor the compositional changes in chemically defined media. SERS shows clearly that even when media are stored at low temperature (2–8 °C) and in the dark, significant chemical changes occur, particularly with regard to cysteine/cystine concentration.     

Diagnostic Raman spectroscopy for the forensic detection of biomaterials and the preservation of cultural heritage

This paper reviews the contributions of analytical Raman spectroscopy to the non-destructive characterisation of biological materials of relevance to forensic science investigations, including the sourcing of resins and the identification of the biodegradation of art and archaeological artefacts. The advantages of Raman spectroscopy for non-destructive analysis are well-appreciated; however, the ability to record molecular information about organic and inorganic species present in a heterogeneous specimen at the same time, the insensitivity of the Raman scattering process to water and hydroxyl groups, which removes the necessity for sample desiccation, and the ease of illumination for samples of very small and very large sizes and unusual shapes are also apparent. Several examples are used to illustrate the application of Raman spectroscopic techniques to the characterisation of forensic biomaterials and for the preservation of cultural heritage through case studies in the following areas: wall-paintings and rock art, human and animal tissues and skeletal remains, fabrics, resins and ivories.     

Evading the Illusions: Identification of False Peaks in Micro-Raman Spectroscopy and Guidelines for Scientific Best Practice

Micro-Raman spectroscopy is an important analytical tool in a large variety of science disciplines. The technique is suitable for both identification of chemical bonds and studying more detailed phenomena like molecular interactions, material strain, crystallinity, defects, and bond formations. Raman scattering has one major weakness however: it is a very low probability process. The weak signals require very sensitive detection systems, which leads to a high probability of picking up signals from origins other than the sample. This complicates the analysis of the results and increases the risk of misinterpreting data. This work provides an overview of the sources of spurious signals occurring in Raman spectra, including photoluminescence, cosmic rays, stray light, artefacts caused by spectrometer components, and signals from other compounds in or surrounding the sample. The origins of these false Raman peaks are explained and means to identify and counteract them are provided.     

Advances in surface-enhanced Raman spectroscopy for analysis of pharmaceuticals: A review

Recently, Raman spectroscopy become a popular and potential analytical technique for the analysis of pharmaceuticals as a result of its advancement. The innovation of laser technology, Fourier Transform-Raman spectrometers with charge coupled device (CCD) detectors, ease of sample preparation and handling, mitigation of sub-sampling problems using different geometric laser irradiance patterns and invention of different optical components of Raman spectrometers are contributors of the advancement of Raman spectroscopy. Transmission Raman Spectroscopy is a useful tool in pharmaceutical analysis to address the problems related with sub-sampling in conventional Raman back scattering. More importantly, the development of surface-enhanced Raman scattering (SERS) has been a prominent advancement for Raman spectroscopy to be applied for pharmaceuticals analysis as it avoids the inherent insensitivity and fluorescence problems. As the active pharmaceutical ingredients (APIs) contain aromatic or conjugated domains with strong Raman scattering activity, Raman spectroscopy is an attractive alternative conventional analytical method for pharmaceuticals. Coupling of Raman spectroscopy with separation techniques is also another advancement applied to reduce or avoid possible spectral interferences. Therefore, in this review, transmission Raman spectroscopy, SERS, and SERS coupled with various separation techniques for pharmaceutical analysis are presented.     

Detection of Circularly Polarized Luminescence of a Cs‐EuIII Complex in Raman Optical Activity Experiments

Circularly polarized luminescence (CPL) spectra are extremely sensitive to molecular structure. However, conventional CPL measurements are difficult and require expensive instrumentation. As an alternative, we explore CPL using Raman scattering and Raman optical activity (ROA) spectroscopy. The cesium tetrakis(3‐heptafluoro‐butylryl‐(+)‐camphorato) europium(III) complex was chosen as a model as it is known to exhibit very large CPL dissymmetry ratio. The fluorescent bands could be discriminated from true Raman signals by comparison of spectra acquired with different laser excitation wavelengths. Furthermore, the ROA technique enables fluorescence identification by measuring the degree of circularity. The CPL dissymmetry ratio was measured as the ROA circular intensity difference of 0.71, the largest one ever reported. The alternative CPL measurement enhances applications of lanthanides in analytical chemistry and chemical imaging of biological objects.     

Raman spectroscopy for the analysis of biomolecules

Spurred on by technological advances, Raman spectroscopy is becoming an important tool in the analysis of biological materials. It can provide unique information on composition and molecular structure. For biological chromophores resonance Raman effectively transforms absorption spectroscopy into a high information technique.     

Two Spectroscopies in One: Interference of Circular Dichroism and Raman Optical Activity

Previously, we and other laboratories have reported an unusual and strong Raman optical activity (ROA) induced in solvents by chiral dyes. Various theories of the phenomenon appeared, but they were not capable of explaining fully the observed ROA band signs and intensities. In this work, an analysis based both on the light scattering theory and dedicated experiments provides a more complete understanding. For example, double-cell magnetic circular dichroism and magnetic ROA experiments with copper-porphyrin complex show that the induced chirality is observed without any contact of the solvents with the complex. The results thus indicate that a combination of electronic circular dichroism (ECD) with the polarized Raman scattering is responsible for the effect. The degree of circularity of solvent vibrational bands is a principal molecular property participating in the event. The insight and the possibility to predict the chirality transfer promise future applications in spectroscopy, chemical analysis and polarized imaging.     

Recent Advances in Plasmonic Nanostructures Applied for Label-free Single-cell Analysis

Cellular heterogeneity presents a major challenge in understanding the relationship between cells of particular genotype and response in disease. In order to characterize the cell-to-cell differences during the biochemical processes, single-cell analysis is necessary. Profiting from the unique localized surface plasmon resonance (LSPR) and Mie scattering, plasmonic nanostructures have revealed stable and adjustable scattering signals, avoiding photobleaching, blinking and autofluorescence phenomenon. These characterizations are propitious to the dynamic trace and biological image of single living cells. In this review, we discuss the recent advances in plasmonic nanostructures applied for label-free detection and monitoring of target cells at single-cell level by using three different techniques, surface-enhanced Raman scattering (SERS), surface-enhanced Infrared absorption spectroscopy (SEIRAS), and dark-field microscopy. Various avenues to design plasmonic probes combining spectra and imaging for single-cell analysis are demonstrated as well. We hope this review can highlight the superiority of plasmonic nanostructures in single cellular analysis, and further motivate the development of label-free cell analysis technique to elucidate cellular diversity and heterogeneity.     

Microstructural characterization of semicrystalline copolymers by Raman spectroscopy

We employ Raman spectroscopy to characterize several microstructural aspects of a family of ethylene-propylene copolymers (EPC). Focus is made on the simultaneous analysis of crystallinity and chemical composition. A curve fitting procedure is used to isolate Raman bands ascribed to polypropylene chains in the crystal lattice from contributions of the amorphous phase. Crystal contents of EPC calculated on this basis are in the range 10–34 wt%, in good agreement with independent wide angle x-ray diffraction and differential scanning calorimetry measurements. Besides, Raman spectroscopy captures in some of the samples a mixed crystalline structure with both, polyethylene and polypropylene crystals, indicating a distinctive molecular architecture. The chemical composition of EPC is obtained from Raman spectra in the melt state to decouple peaks characteristics of the crystal lattice from fundamental vibrational modes of the polymer chain. EPC present ethylene contents in the range 5–26 mol%, in good agreement with parallel results from ¹³C nuclear magnetic resonance analysis. Remarkably, a rather complete characterization of EPC can be achieved on the base of a single experimental technique.     

Surface-enhanced Raman scattering: a new optical probe in molecular biophysics and biomedicine

Sensitive and detailed molecular structural information plays an increasing role in molecular biophysics and molecular medicine. Therefore, vibrational spectroscopic techniques, such as Raman scattering, which provide high structural information content are of growing interest in biophysical and biomedical research. Raman spectroscopy can be revolutionized when the inelastic scattering process takes place in the very close vicinity of metal nanostructures. Under these conditions, strongly increased Raman signals can be obtained due to resonances between optical fields and the collective oscillations of the free electrons in the metal. This effect of surface-enhanced Raman scattering (SERS) allows us to push vibrational spectroscopy to new limits in detection sensitivity, lateral resolution, and molecular structural selectivity. This opens up exciting perspectives also in molecular biospectroscopy. This article highlights three directions where SERS can offer interesting new capabilities. This includes SERS as a technique for detecting and tracking a single molecule, a SERS-based nanosensor for probing the chemical composition and the pH value in a live cell, and the effect of so-called surface-enhanced Raman optical activity, which provides information on the chiral organization of molecules on surfaces.