Molecular basis for dimethylsulfoxide (DMSO) action on lipid membranes

Dimethylsulfoxide (DMSO) is an aprotic solvent that has the ability to induce cell fusion and cell differentiation and enhance the permeability of lipid membranes. It is also an effective cryoprotectant. Insights into how this molecule modulates membrane structure and function would be invaluable toward regulating the above processes and for developing chemical means for enhancing or hindering the absorption of biologically active molecules, in particular into or via the skin. We show here by means of molecular simulations that DMSO can induce water pores in dipalmitoyl-phosphatidylcholine bilayers and propose this to be a possible pathway for the enhancement of penetration of actives through lipid membranes. DMSO also causes the membrane to become floppier, which would enhance permeability, facilitate membrane fusion, and enable the cell membrane to accommodate osmotic and mechanical stresses during cryopreservation.     

Chemically induced phospholipid translocation across biological membranes

Chemical means of manipulating the distribution of lipids across biological membranes is of considerable interest for many biomedical applications as a characteristic lipid distribution is vital for numerous cellular functions. Here we employ atomic-scale molecular simulations to shed light on the ability of certain amphiphilic compounds to promote lipid translocation (flip-flops) across membranes. We show that chemically induced lipid flip-flops are most likely pore-mediated: the actual flip-flop event is a very fast process (time scales of tens of nanoseconds) once a transient water defect has been induced by the amphiphilic chemical (dimethylsulfoxide in this instance). Our findings are consistent with available experimental observations and further emphasize the importance of transient membrane defects for chemical control of lipid distribution across cell membranes.     

Ion separations with membranes

Ion separations are important for resource recovery, water treatment, and energy production and storage. Techniques such as chemical precipitation, selective adsorption, and solvent extraction are effective, but membranes may separate ions continuously with less waste and lower energy costs. Separation of monovalent and multivalent ions with nanofiltration or electrodialysis membranes already enables water softening and edible salt purification. Similar membranes are attractive as separators in vanadium redox flow batteries. Selective partitioning of divalent counter-ions into ion-exchange membranes even allows transport of these ions against their concentration gradients in salt mixtures. However, separations of ions with the same charge is more challenging. Recent research demonstrated highly selective ion “sieving” at small scales. Separations using electrical potentials and differences in ion electrophoretic mobilities are promising, but relatively unexplored. Carrier-mediated transport affords high selectivity in liquid membranes, but these systems are not very stable, and selective transport via hopping between anchored carriers has proven elusive. Finally, this paper discusses how concentration polarization decreases selectivities in many membrane processes. Although development of selective, inexpensive ion-separation membranes is a work in progress, successes in water softening and edible salt purification suggests that future selective membranes will serve as complementary methods to traditional purification techniques.     

Modulating the structure and properties of cell membranes: the molecular mechanism of action of dimethyl sulfoxide

Dimethyl sulfoxide (DMSO) is a small amphiphilic molecule which is widely employed in cell biology as an effective penetration enhancer, cell fusogen, and cryoprotectant. Despite the vast number of experimental studies, the molecular basis of its action on lipid membranes is still obscure. A recent simulation study employing coarse-grained models has suggested that DMSO induces pores in the membrane (Notman, R.; Noro, M.; O'Malley, B.; Anwar, J. J. Am. Chem. Soc. 2006, 128, 13982-13983). We report here the molecular mechanism for DMSO's interaction with phospholipid membranes ascertained from atomic-scale molecular dynamics simulations. DMSO is observed to exhibit three distinct modes of action, each over a different concentration range. At low concentrations, DMSO induces membrane thinning and increases fluidity of the membrane's hydrophobic core. At higher concentrations, DMSO induces transient water pores into the membrane. At still higher concentrations, individual lipid molecules are desorbed from the membrane followed by disintegration of the bilayer structure. The study provides further evidence that a key aspect of DMSO's mechanism of action is pore formation, which explains the significant enhancement in permeability of membranes to hydrophilic molecules by DMSO as well as DMSO's cryoprotectant activity. The reduction in the rigidity and the general disruption of the membrane induced by DMSO are considered to be prerequisites for membrane fusion processes. The findings also indicate that the choice of DMSO concentration for a given application is critical, as the concentration defines the specific mode of the solvent's action. Knowledge of the distinct modes of action of DMSO and associated concentration dependency should enable optimization of current application protocols on a rational basis and also promote new applications for DMSO.     

Solvation and aggregation of n,n'-dialkylimidazolium ionic liquids: a multinuclear NMR spectroscopy and molecular dynamics simulation study

The solvation and aggregation of the ionic liquid (IL) 1-n-butyl-3-methylimidazolium chloride ([C4mim]Cl) in water and dimethylsulfoxide (DMSO) were examined by analysis of (1)H and (35/37)Cl chemical shift perturbations and molecular dynamics (MD) simulations. Evidence of aggregation of the IL n-butyl chains in aqueous environments at IL concentrations of 75-80 wt% was observed both in the NMR experiments and in the MD simulations. The studies also show that [C4mim]Cl behaves as a typical electrolyte in water, with both ions completely solvated at low concentrations. On the other hand, the data reveal that the interactions between the [C4mim](+) and Cl(-) ions strengthen as the DMSO content of the solutions increases, and IL-rich clusters persist in this solvent even at concentrations below 10 wt%. These results provide an experimentally supported atomistic explanation of the effects that these two solvents have on some of the macroscopic properties of [C4mim]Cl. The implications that these findings could have on the design of IL-based solvent systems are briefly discussed.     

Theoretical Insights into Specific Ion Effects and Strong-Weak Acid-Base Rules for Ions in Solution: Deriving the Law of Matching Solvent Affinities from First Principles

We present a detailed study of specific ion effects, volcano plots and the law of matching solvent affinities by means of a conceptual density functional theory (DFT) approach. Our results highlight that specific ion effects and the corresponding implications on the solvation energy are mainly due to differences in the electric chemical potentials and chemical hardnesses of the ions and the solvent. Our approach can be further used to identify reliable criteria for the validity of the law of matching solvent affinities. Basic expressions are derived, which allow us to study the limiting conditions for this empirical observation with regard to matching chemical reactivity indices. Moreover, we show that chaotropic and kosmotropic concepts and their implications for the stability of ion pairs are directly related to a generalized strong and weak acids and bases (SWAB) principle for ions in solution, which is also applicable to rationalize the shape of volcano plots for different solvents. In contrast to previous assumptions, all empirical findings can be explained by the properties of local solvent-ion complexes which dominate the specific global behavior of ion pairs in solution.     

Kinetics of metal exchange in Cd(II) octa(4-bromophenyl)porphyrinate with <Emphasis Type="Italic">d</Emphasis>-metal salts in organic solvents

The reaction of metal exchange between Cd(II) octa(4-bromophenyl)porphyrinate with СuCl₂ and ZnCl₂ in DMFA and DMSO is studied by means of spectrophotometry. The kinetic parameters of the metal exchange reaction are calculated, a stoichiometric reaction mechanism is proposed. The effect the natures of the solvent, salt solvate, and the chemical modification of tetrapyrrole macrocycle have on the kinetic parameters of the metal exchange reaction are revealed.     

Zum Wassertransport durch Membranen aus Polyvinylalkohol

Zusammenfassung Der Wassertransport durch Filme aus Polyvinyl-alkohol, die durch Tempern bzw. Verestern mit Dicarbonsäuren unlöslich gemacht waren, wurde unter den Bedingungen der Osmose und der umgekehrten Osmose untersucht. Die erhaltenen semipermeablen Membranen besitzen für Cl^–- und SO₄ ^–-Ionen ein mittleres Rückhaltevermögen. Für Zuckermoleküle ist das Rückhaltevermögen praktisch 100%, d. h. der chemische Fluß kann vernachlässigt werden. Aus der Temperaturabhängigkeit des Wasserflusses bei fehlendem chemischen Fluß wurde die Aktivierungsenergie für den Transportprozeß zu 5,9 ±0,2 kcal/mol ermittelt.Die umgekehrte Osmose an den binären Gemischen DMSO/Wasser, Äthanol/Wasser und Aceton/Wasser ergab eine kaum merkliche Trennung im System DMSO/ Wasser, dagegen zunehmende Trenneigenschaften der Membran mit abnehmender Dielektrizitätskonstante der organischen Komponente. Die fehlende Trennwirkung im System DMSO/Wasser ist darauf zurückzuführen, daß DMSO ebenso wie Wasser ein gutes Lösungsmittel für Polyvinylalkohol ist.Die Aktivierungsenergie für den Transport des Wassers entspricht der Energie der Wasserstoff brückenbindung. Dieser Befund und das Verhalten der Membran gegenüber dem Gemisch DMSO/Wasser stützen die Auffassung, daß die Filme aus Polyvinylalkohol in den beschriebenen Versuchen als reine Löslichkeitsmembran wirken.

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Summary The permeation of water through polyvinylalcohol membranes which have been made insoluble through tempering or esterification was investigated under the conditions of osmosis and reverse osmosis. The semipermeable membranes which were obtained, had an average salt rejection for Cl^– and SO₄ ^– ions. The retention for sugar molecules was almost 100%, i.e. the chemical flux was negligible. From temperature dependence of the flow of water in the absence of chemical flux, the activation energy for the transport was determined to 5.9 ±0.2 kcal/mol.For the reverse osmosis with binary mixtures DMSO/water, ethanol/water and acetone/water a scarcely perceptible separation of the system DMSO/water was achieved, but an increasing separation characteristic of the membrane was observed with a decreasing dielectric constant of the organic component. The poor separation in the system DMSO/water is due to the fact that DMSO as well as water is a good solvent for polyvinylalcohol.The activation energy for the transport of water corresponds to the energy of the hydrogen bonding. This result and the behaviour of the membrane with the mixture DMSO/water support the conception that the polyvinylalcohol films in the described experiments merely act as solubility membranes.

     

An RNA-Cleaving DNAzyme That Requires an Organic Solvent to Function

Engineering functional nucleic acids that are active under unusual conditions will not only reveal their hidden abilities but also lay the groundwork for pursuing them for unique applications. Although many DNAzymes have been derived to catalyze diverse chemical reactions in aqueous solutions, no prior study has been set up to purposely derive DNAzymes that require an organic solvent to function. Herein, we utilized in vitro selection to isolate RNA-cleaving DNAzymes from a random-sequence DNA pool that were “compelled” to accept 35 % dimethyl sulfoxide (DMSO) as a cosolvent, via counter selection in a purely aqueous solution followed by positive selection in the same solution containing 35 % DMSO. This experiment led to the discovery of a new DNAzyme that requires 35 % DMSO for its catalytic activity and exhibits drastically reduced activity without DMSO. This DNAzyme also requires divalent metal ions for catalysis, and its activity is enhanced by monovalent ions. A minimized, more efficient DNAzyme was also derived. This work demonstrates that highly functional, organic solvent-dependent DNAzymes can be isolated from random-sequence DNA libraries via forced in vitro selection, thus expanding the capability and potential utility of catalytic DNA.     

Simulating the formation of sodium:electron tight-contact pairs: watching the solvation of atoms in liquids one molecule at a time

The motions of solvent molecules during a chemical transformation often dictate both the dynamics and the outcome of solution-phase reactions. However, a microscopic picture of solvation dynamics is often obscured by the concerted motions of numerous solvent molecules that make up a condensed-phase environment. In this study, we use mixed quantum/classical molecular dynamics simulations to furnish the molecular details of the solvation dynamics that leads to the formation of a sodium cation-solvated electron contact pair, (Na(+), e(-)), in liquid tetrahydrofuran following electron photodetachment from sodide (Na(-)). Our simulations reveal that the dominant solvent response is comprised of a series of discrete solvent molecular events that work sequentially to build up a shell of coordinating THF oxygen sites around the sodium cation end of the contact pair. With the solvent response described in terms of the sequential motion of single molecules, we are then able to compare the calculated transient absorption spectroscopy of the sodium species to experiment, providing a clear microscopic interpretation of ultrafast pump-probe experiments on this system. Our findings suggest that for solute-solvent interactions similar to the ones present in our study, the solvation dynamics is best understood as a series of kinetic events consisting of reactions between chemically distinct local structures in which key solvent molecules must be considered to be part of the identity of the reacting species.     

Solution properties of poly(amic acid)–NMP containing LiCl and their effects on membrane morphologies

Physical properties of poly(amic acid) (PAA) casting solutions in N-methyl-2-pyrrolidone (NMP) containing lithium chloride (LiCl) were characterized by viscometry and dynamic light scattering (DLS) and were related to the morphological properties of asymmetric membranes prepared from these solutions. At a fixed polymer concentration, the increase in viscosity of the PAA solutions with increasing LiCl content is mainly determined by the viscosity of the salt–solvent medium, implying that the LiCl–NMP interactions are stronger than those between LiCl and PAA. Because of the strong salt–solvent interactions, complexes between LiCl and NMP are formed. The complexes reduce the solvent power of NMP for PAA inducing polymer aggregation (clustering) and/or transient cross-links in the solutions. Dynamic light scattering results for salt-containing solutions at low PAA concentrations support the existence of these aggregations. Solutions without salt showed a single relaxation, but solutions with LiCl exhibit multiple relaxation modes; two diffusional modes of cooperative and aggregates, and one angle independent transient network mode. The polymer aggregates and transient cross-links form a gel-like structure in the casting solution film and hinder macrovoid formation during phase inversion, resulting in asymmetric membranes with a primarily sponge-like structure.     

Polymer inclusion membranes: The concept of fixed sites membrane revised

The mechanism of facilitated transport of metal ions across polymer inclusion membranes (PIMs) is revised on the basis of transport flux measurements and of new data brought by techniques sensitive to local inter-molecular interactions and molecular diffusion. Cellulose triacetate (CTA) membranes built with two types of inclusion carriers: a liquid one Aliquat 336 and a crystalline one Lasalocid A, both able to carry metal ions across PIMs and supported liquid membranes (SLMs) made of the same components, have been compared. Both PIM systems show similar effects for what concern the need of a carrier threshold concentration for the occurrence of a transport flux across PIM as revealed by flux and fluorescence correlation spectroscopy (FCS) measurements, and the dependence of the chemical nature of plasticizers on the metal ion flux. These systems also present similar Raman and far IR signatures of structural evolution of PIMs with the increase of the carrier concentration within the CTA matrix.

All the presented data are interpreted as concern PIMs, according to an evolution of chemical interactions between components of the polymeric membrane able to lead to a phase transition. This phase transition type of the carrier-plasticized polymer system is induced by the increase of carrier concentration in the polymer chains. The PIM progressively organizes itself like a liquid SLM because of the enhancement of preferential solvent interactions between the carrier and the plasticizer.

The main conclusion of this study is that the classically adopted “hopping” transport mechanism between fixed carrier sites in a PIM does not apply to such carrier chemically unbound to polymer membrane systems.     

Ligand-exchange processes on solvated lithium cations: DMSO and water/DMSO mixtures.

Solutions of LiClO(4) in solvent mixtures consisting of dimethylsulfoxide (DMSO) and water, or DMSO and gamma-butyrolactone, were studied by (7)Li NMR spectroscopy (for complexation by cryptands in gamma-butyrolactone as a solvent, see: E. Pasgreta, R. Puchta, M. Galle, N. J. R. van Eikema Hommes, A. Zahl, R. van Eldik, J. Incl. Phen., 2007, 58, 81-88). Chemical shifts indicate that the Li(+) ion is coordinated by four DMSO molecules. In the binary solvent mixture of water and DMSO, no selective solvation is detected, thus indicating that on increasing the water content of the solvent mixture, DMSO is gradually displaced by water in the coordination sphere of Li(+). The ligand-exchange mechanism of Li(+) ions solvated by DMSO and water/DMSO mixtures was studied using DFT calculations. Ligand exchange on [Li(DMSO)(4)](+) was found to follow a limiting associative (A) mechanism. The displacement of coordinated H(2)O by DMSO in [Li(H(2)O)(4)](+) follows an associative interchange mechanism. The suggested mechanisms are discussed in reference to available experimental and theoretical data.     

Absorption and Emission Sensitivity of 2‐(2′‐Hydroxyphenyl)benzoxazole to Solvents and Impurities

2‐(2′‐Hydroxyphenyl)benzoxazole (HBO) is known for undergoing intramolecular proton transfer in the excited state to result in the emission of its tautomer. A minor long‐wavelength absorption band in the range 370–420 nm has been reported in highly polar solvents such as dimethylsulfoxide (DMSO). However, the nature of this species has not been entirely clarified. In this work, we provide evidence that this long‐wavelength absorption band might have been caused by base or metal salt impurities that are introduced into the spectral sample during solvent transport using glass Pasteur pipettes. The contamination by base or metal salt could be avoided by using borosilicate glass syringes or nonglass pipettes in sample handling. Quantum chemical calculations conclude that solvent‐mediated deprotonation is too energetically costly to occur without the aid of a base of an adequate strength. In the presence of such a base, the deprotonation of HBO and its effect on emission are investigated in dichloromethane and DMSO, the latter of which facilitates deprotonation much more readily than the former. Finally, the absorption and emission spectra of HBO in 13 solvents are reported, from which it is concluded that ESIPT is hindered in polar solvents that are also strong hydrogen bond acceptors.     

A ‘naked-eye’ chemosensor system for phytate

We report the synthesis of two new anion receptors of a covalently linked 1,3,5-triarylbenzoamido-crown ether. Our results show that combined with a picrate salt they act by means of an intermolecular charge transfer process (EDA complex), as naked-eye sensors for basic anions, especially for sodium phytate in DMSO/H₂O (1:1).     

Thermodynamics of complex formation in dimethyl sulfoxide with ligands coordinating via N,P, As,Sb, OR Bi : III. A comparison between aromatic and aliphatic amines and phosphines

The stabilities of the complexes formed by silver(I), cadmium(II) and zinc(II) with tri-n-butylamine and tri-n-butylphosphine have been determined in dimethyl sulfoxide (DMSO). For the two latter metal ions, it has also been found that complexes are not formed in appreciable amounts with the triphenyl compounds Ph₃X, X = N, P and, in the case of cadmium(II), also As.From these and earlier measurements referring to DMSO as well as aqueous solutions, it was found that the stepwise stability constants increase by roughly one power of ten for each aromatic ring replaced by an aliphatic group, evidently as a consequence of the improved donor properties of the coordinating atoms. Further, for ligands of the same type, the stabilities are always markedly lower in DMSO than in aqueous solution. This is certainly due to the fact that the solvent molecules compete more strongly for the coordination sites in DMSO than in water, as reflected by the larger heats of solvation found in the former solvent for the metal ions concerned.     

溶剂对PVDF铸膜液相转化和微孔膜皮-亚两层结构的不同影响

采用皮-亚分步凝固成膜机理分析了3种不同溶剂对聚偏氟乙烯(PVDF)铸膜液相转化和膜结构的影响,采用浊度法测定铸膜液体系的热力学性质,沉淀速度采用光透射仪测定.结果显示,3种膜的皮层分相主要由热力学性质控制,均发生延时液固分相,生成了相互融合的球粒组成的致密皮层.3体系的亚层分相行为由动力学扩散过程控制;对于二甲基亚砜(DMSO)、N,N-二甲基乙酰胺(DMAc)体系亚层发生瞬时液液分相,结晶化对动力学过程影响小,表现为光透射曲线上分相时间t2短,生成了大孔结构为主的亚层,膜厚度、孔隙率和气通量均高、结晶度低;N,N-二甲基甲酰胺(DMF)体系亚层发生延时液液分相,结晶化对动力学过程影响大,t2长,生成蜂窝状孔结构亚层,其膜厚度、孔隙率和气通量较低,但膜的结晶度高.     

Absolute solvation free energy of Li+ and Na+ ions in dimethyl sulfoxide solution: a theoretical ab initio and cluster-continuum model study

The solvation of the lithium and sodium ions in dimethyl sulfoxide solution was theoretically investigated using ab initio calculations coupled with the hybrid cluster-continuum model, a quasichemical theory of solvation. We have investigated clusters of ions with up to five dimethyl sulfoxide (DMSO) molecules, and the bulk solvent was described by a dielectric continuum model. Our results show that the lithium and sodium ions have four and five DMSO molecules into the first coordination shell, and the calculated solvation free energies are -135.5 and -108.6 kcal mol(-1), respectively. These data suggest a solvation free energy value of -273.2 kcal mol(-1) for the proton in dimethyl sulfoxide solution, a value that is more negative than the present uncertain experimental value. This and previous studies on the solvation of ions in water solution indicate that the tetraphenylarsonium tetraphenylborate assumption is flawed and the absolute value of the free energy of transfer of ions from water to DMSO solution is higher than the present experimental values.     

Effect of NaCl and KCl on phosphatidylcholine and phosphatidylethanolamine lipid membranes: insight from atomic-scale simulations for understanding salt-induced effects in the plasma membrane

To gain a better understanding of how monovalent salt under physiological conditions affects plasma membranes, we have performed 200 ns atomic-scale molecular dynamics simulations of phosphatidylcholine (PC) and phosphatidylethanolamine (PE) lipid bilayers. These two systems provide representative models for the outer and inner leaflets of the plasma membrane, respectively. The implications of cation-lipid interactions in these lipid systems have been considered in two different aqueous salt solutions, namely NaCl and KCl, and the sensitivity of the results on the details of interactions used for ions is determined by repeating the simulations with two distinctly different force fields. We demonstrate that the main effect of monovalent salt on a phospholipid membrane is determined by cations binding to the carbonyl region of a membrane, while chloride anions mostly stay in the water phase. It turns out that the strength and character of the cation-lipid interactions are quite different for different types of lipids and cations. PC membranes and Na+ ions demonstrate strongest interactions, leading to notable membrane compression. This finding was confirmed by both force fields (Gromacs and Charmm) employed for the ions. The binding of potassium ions to PC membranes (and the overall effect of KCl), in turn, was found to be much weaker mainly due to the larger size of a K+ ion compared to Na+. Furthermore, the effect of KCl on PC membranes was found to be force-field sensitive: The binding of a potassium ion was not observed at all in simulations performed with the Gromacs force-field, which seems to exaggerate the size of a K+ ion. As far as PE lipid bilayers are concerned, they are found to be influenced by monovalent salt to a significantly lesser extent compared to PC bilayers, which is a direct consequence of the ability of PE lipids to form both intra- and intermolecular hydrogen bonds and hence to adopt a more densely packed bilayer structure. Whereas for NaCl we observed weak binding of Na+ cations to the PE lipid-water interface, in the case of KCl we witnessed almost complete lack of cation binding. Overall, our findings indicate that monovalent salt ions affect lipids in the inner and outer leaflets of plasma cell membranes in substantially different ways.