基于变温紫外分光光度法研究温度对DNA凝聚过程影响

荧光单分子实验结果表明温度能够促进DNA凝聚,随着温度升高,精胺(亚精胺)-DNA凝聚体系中DNA凝聚构象趋于更加紧致、有序。为探究温度对不同高价离子-DNA凝聚体系的影响,利用自行搭建的变温紫外分光光度计,通过系统研究荧光单分子实验中采用的精胺(亚精胺)-DNA凝聚体系及去离子水中DNA在260 nm处特征吸收值随温度变化情况,确定了DNA凝聚构象与其260 nm处特征吸收值之间的对应关系为：DNA凝聚构象越紧致、有序,其对应的260 nm处紫外吸收值越低。在此基础上,系统地研究了DNA凝聚实验中常用四种钴胺化合物-DNA凝聚体系随温度变化情况,结果表明三氯六胺合钴与精胺(亚精胺)类似,其对应的DNA凝聚体系在260 nm特征吸收值,随着温度升高而逐渐降低,即DNA凝聚构象趋于更加紧致、有序。而三(乙二胺)氯化钴、反式双(乙二胺)氯化钴、五胺氯化钴的情况却不同,与其对应的DNA凝聚体系在260 nm特征吸收值,随着温度升高,呈现先增加,再降低,然后再增加的规律。     

Effects of Ionic Dependence of DNA Persistence Length on the DNA Condensation at Room Temperature

DNA persistence length is a key parameter for quantitative interpretation of the conformational properties of DNA and related to the bending rigidity of DNA.A series of experiments pointed out that,in the DNA condensation process by multivalent cations,the condensed DNA takes elongated coil or compact globule states and the population of the compact globule states increases with an increase in ionic concentration.At the same time,single molecule experiments carried out in solution with multivalent cations(such as spermidine,spermine)indicated that DNA persistence length strongly depends on the ionic concentration.In order to revolve the effects of ionic concentration dependence of persistence length on DNA condensation,a model including the ionic concentration dependence of persistence length and strong correlation of multivalent cation on DNA is provided.The autocorrelation function of the tangent vectors is found as an effective way to detect the ionic concentration dependence of toroidal conformations.With an increase in ion concentration,the first periodic oscillation contained in the autocorrelation function shifts,the number of segment contained in the first periodic oscillation decreases gradually.According to the experiments,the average long-axis length is defined to estimate the ionic concentration dependence of condensation process further.The relation between long-axis length and ionic concentration matches the experimental results qualitatively.     

Elastic response of single DNA molecules exhibits a reentrant collapsing transition

We measured the elastic response of single DNA molecules at various concentrations of the trivalent cation, spermidine. When added spermidine caused the DNA to collapse, the force-extension curves showed either plateaus or stick-release patterns depending on the concentration. The periodic stick-release response determines a characteristic length, which may reflect toroidal supercoiling. At high concentrations of spermidine, we observed the reelongation of single molecules of collapsed DNA. Thus condensation occurs between lower and upper critical concentrations, verifying that the transition is reentrant as theoretically predicted.     

Processes of DNA condensation induced by multivalent cations： Approximate annealing experiments and molecular dynamics simulations

The condensation of DNA induced by spermine is studied by atomic force microscopy （AFM） and molecular dynamics （MD） simulation in this paper. In our experiments, an equivalent amount of multivalent cations is added to the DNA solutions in different numbers of steps, and we find that the process of DNA condensation strongly depends on the speed of adding cations. That is, the slower the spermine cations are added, the slower the DNA aggregates. The MD and steered molecular dynamics （SMD） simulation results agree well with the experimental results, and the simulation data also show that the more steps of adding multivalent cations there are, the more compact the condensed DNA structure will be. This investigation can help us to control DNA condensation and understand the complicated structures of DNA--cation complexes.     

DNA凝聚性质的紫外光谱研究

为探讨DNA凝聚的性质和机制,探究了不同浓度的精胺、亚精胺和三氯六氨合钴对小牛胸腺DNA紫外吸收的影响。精胺、亚精胺与DNA相互作用在紫外光谱上具有相似特征,随着它们浓度的增加紫外光谱在260nm处都有先增色,后减色,再增色的趋势;随着三氯六氨合钴浓度的升高紫外光谱出现先减色,后增色。精胺、亚精胺和三氯六氨合钴与DNA相互作用均能使DNA凝聚,但作用方式有所不同。三氯六氨合钴较之精胺、亚精胺与DNA相互作用更为敏感。多胺紫外光谱分析结果与最近单分子实验结果吻合。     

Tunable AC thermal anemometry

This paper suggests and demonstrates a novel flow measurement technique: tunable AC thermal anemometry, that allows simple integration, robust measurement and extremely high accuracy. The principle and simple theoretical analysis of the technique are presented. To find the optimal condition at which the phase lag becomes most sensitive to the flow speed change, the phase lag was measured scanning the heating frequency from 1 to 100 Hz, while the flow speed of ethanol was increased stepwise from 0 to 40 mm/s. The sensitivity of the phase lag depended on the heating frequency and the flow speed. It was possible to measure the average flow speed of 0.7 mm/s with the resolution of 0.1 mm/s at 4 Hz.     

AlGaN表面坑状缺陷及GaN缓冲层位错缺陷对AlGaN/GaN HEMT电流崩塌效应的影响

利用金属有机气相外延(MOVPE)技术生长了具有不同AlGaN表面坑状缺陷和GaN缓冲层位错缺陷密度的AlGaN/GaN 高电子迁移率晶体管(HEMT)样品,并对比研究了两种缺陷对器件栅、漏延迟电流崩塌效应的影响.栅延迟测试表明,AlGaN表面坑状缺陷会引起栅延迟电流崩塌效应和源漏电阻的增加,而且表面坑状缺陷越多,栅延迟电流崩塌程度和源漏电阻的增加越明显.漏延迟测试显示,AlGaN表面坑状缺陷对漏延迟电流崩塌影响不大,而GaN缓冲层位错缺陷主要影响漏延迟电流崩塌.研究结果表明,AlGaN表面坑状缺陷和Ga 关键词： AlGaN/GaN HEMT 电流崩塌 坑状缺陷 位错缺陷     

Effect of Torsion on Cisplatin-Induced DNA Condensation

We investigate the effect of torsion on DNA condensation with the covalently closed circular DNA as the torsionconstrained system, using an atomic force microscope. It is found that there are two stages in the DNA condensation process under torsional constraint. At the early stage, the low torsion will accelerate DNA condensation by promoting the formation of micro-loops or intersection structures; while at the later stage, the increasing torsion will slow it down by preventing the crosslinking of cisplatin and DNA since the DNA molecule becomes more rigid. Our results show the important role of torsion in DNA condensation and sheds new light on the mechanism for DNA condensation.     

Surface Nucleation Kinetics on Active Centers from Supersaturated Vapor

The formation of nuclei from a supersaturated vapor on a surface with active centers is treated within standard self-consistent classical model with exhaustion of active centers. Basic characteristics of nucleation process (total number of nuclei, nucleation rate, time lag and size distribution of nuclei) are determined by numerical solution of kinetic equations. It is shown that standard approach to nucleation on active centers based on Avrami model coincides with our approach in the values of time lag of nucleation process, but it differs in the total number of nuclei.     

天然气超声速除湿器旋流分离数值研究

壁面型线决定了超声速除湿器的内部流场特征,进而对组分凝结特性和分离效率等产生重要影响。本文借助数值方法研究了内扩张型超声速除湿器流场径向分布特性以及组分凝结特性。计算结果表明除湿器内气流的周向速度、压力、温度在不同截面呈现出不同的径向分布特征。加速流道内壁面侧的气流温度低于外壁面侧,使组分凝结首先发生于流道内侧,为达到气液分离效果必须增加分离段长度。因此需要对除湿器加速段流道进行优化设计,以改善除湿器工作性能。     

激光空泡在文丘里管中运动的动力学特性

以水为工作介质,在不同文丘里管入口压力下,利用YAG激光器产生的激光轰击水中的金属靶材产生空泡,借助高速摄像系统记录激光空泡在文丘里管中的运动过程,并采用流体动力学模拟对文丘里管中的流场特性和空泡的溃灭特性进行分析.结果表明:激光空泡在文丘里管中的运动,其形状变化可分为产生阶段、挤压阶段、溃灭初始阶段和溃灭阶段等四个阶段.空泡的溃灭取决于流场状态,当流动为层流时,空泡不发生溃灭;当流动为湍流时,空泡发生溃灭,且湍流程度越剧烈,溃灭现象越显著.搭建的激光空泡生成与运动系统能够实现空泡的定点溃灭.     

Water condensation kinetics on a hydrophobic surface

Employing thermal desorption spectroscopy, we show that the effective probability of water condensation at low water vapor pressure on an octane film is much below unity at 100-120 K. This unusual finding is related to a small binding energy of H2O monomers on octane (approximately equal to 0.08 eV), requiring the formation of critical water clusters for condensation to occur. This results in strong temperature and impingement-rate dependencies of the water condensation rate and a nonlinear uptake as a function of dose time. All these features are rationalized quantitatively by a kinetic model of water condensation.     

Collapse of a Bose gas: Kinetic approach

We have analytically explored the temperature dependence of critical number of particles for the collapse of a harmonically trapped attractively interacting Bose gas below the condensation point by introducing a kinetic approach within the Hartree?CFock approximation. The temperature dependence obtained by this easy approach is consistent with that obtained from the scaling theory.     

A solution to the Navier-Stokes inequality with an internal singularity

We consider weak solutions to the time dependent Navier-Stokes equations of incompressible fluid flow in three dimensional space with an external force that always acts against the direction of the flow. We show that there exists a solution with an internal singularity. The speed of the flow reaches infinity at this singular point. In addition, the solution has finite kinetic energy.The author was supported in part by a Sloan Foundation Fellowship     

燃料空气供给条件对热声不稳定燃烧影响的研究

对Solar低排放预混燃烧系统的燃烧稳定性进行了数值研究.应用非定常N-S方程、雷诺应力紊流模型及涡团耗散燃烧模型,数值模拟了该类型燃烧器在不同的燃料空气供给条件下的气流流动特性和压力振荡特性,并给出了不稳定发生时压力和速度振荡的幅值和频率.根据供给条件的不同,燃烧可以是稳定的或是不稳定的,取决于燃料到火焰前沿的迟滞时间.采用CFD方法,可精确地获得燃料到火焰前沿的迟滞时间,证实了所采用的模型能够精确预测不稳定燃烧的出现及振荡特性.通过调整燃料与空气的供给条件,可使振荡激励或阻尼.     

固体表面液滴铺展与润湿接触线的移动分析

液滴在固体表面上的铺展行为与润湿特性对许多工业生产过程的研究具有重要意义.根据液滴在光滑表面上的受力情况,建立了液滴平壁铺展的动力学模型.应用润滑近似方法和二维Navier-Stokes方程,建立了液滴沿理想表面铺展的动量和连续性方程.根据建立的方程,应用数值解法求解并详细分析了液滴在铺展过程中膜厚、接触线铺展半径以及铺展速度随时间的变化关系.研究结果表明:液滴的铺展过程可分为扩展和收缩两个阶段,铺展过程伴随着表面能、动能以及各种势能的相互转化,液滴最终的铺展半径大小由固体基面固有的润湿特性所决定;液滴在铺展过程中出现的"坍塌效应"与弯曲液面处的Laplace压力差有关;铺展半径随时间变化的标定律近似满足"1/7"次方标度律.     

A Novel Dehumidification Strategy to Reduce Liquid Fraction and Condensation Loss in Steam Turbines

Massive droplets can be generated to form two-phase flow in steam turbines, leading to erosion issues to the blades and reduces the reliability of the components. A condensing two-phase flow model was developed to assess the flow structure and loss considering the nonequilibrium condensation phenomenon due to the high expansion behaviour in the transonic flow in linear blade cascades. A novel dehumidification strategy was proposed by introducing turbulent disturbances on the suction side. The results show that the Wilson point of the nonequilibrium condensation process was delayed by increasing the inlet superheated level at the entrance of the blade cascade. With an increase in the inlet superheated level of 25 K, the liquid fraction and condensation loss significantly reduced by 79% and 73%, respectively. The newly designed turbine blades not only remarkably kept the liquid phase region away from the blade walls but also significantly reduced 28.1% averaged liquid fraction and 47.5% condensation loss compared to the original geometry. The results provide an insight to understand the formation and evaporation of the condensed droplets inside steam turbines.     

矩形微通道中环状冷凝的数值模拟

建立了一套恒热流边界条件下矩形微通道内环状冷凝过程的一维稳态模型,进行了数值计算,并将数值模拟结果与正三角形中的冷凝过程进行了比较.研究显示,在不同截面的微通道中,液相毛细半径和流速的沿程变化趋势都是相似的.同条件下,矩形通道的冷凝段长度大于正三角形通道.在矩形微通道中,通道入口蒸气压力和水力直径越大或者接触角越小,则冷凝段长度越长.     

Mechanism of Plastic Collapse of Nanosized Crystals with BCC Lattice under Uniaxial Compression

Within the dislocation–kinetic approach, based on the nonlinear kinetic equation for dislocation density, an attempt is made to consider the problem of a catastrophic plastic collapse of defect-free nanocrystals of metals with bcc lattice under their uniaxial compression with a constant deformation rate. Solutions of this equation were found in the form of moving waves, describing the dislocation multiplication process as the wave moves along the crystal from a local dislocation source. Comparison of the theory with the results of experiments on defect-free Mo nanocrystals showed that their ultrahigh strength at the initial stage of deformation is associated with a low rate of rise of crystal plastic deformation in comparison with the growth of its elastic component. The subsequent plastic collapse of crystal is caused by a sharp increasing the plastic component, ending with reaching the equality of elastic and plastic deformation rates.