Three Novel Isomers of FCH2CP System

Three new isomers of FCH2CP system, F(H)CCPH (1), F-cCPC-H(H) (2) and F-cCC(H)P-H (3), are predicted by means of B3LYP and CCSD(T) (single-point) methods with 6-311 G(d,p) and 6-311 G(2df,2p) basis sets, respectively. The three calculated isomers can isomerize into thermodynamically the most stable species F-cPC(H)C-H, which has been suggested in previous theoretical studies, with relatively higher reaction barriers. In view of their higher thermodynamic and kinetic stability, we believe that the three species can be detected in future experiments.     

Predicting Potential Stable Isomers on the Singlet Surface of the [H,P,C,S] System by the MP2 and QCISD(T) Methods

A detailed singlet potential energy surface of [H,P, C,S] system is investigated by means of the MP2 and QCISD(T) methods. Eight isomers are located on the potential energy surface, and at the final QCISD(T)/6-311++G (3df,2p)//MP2/6-311++G(d,p) level with zero-point energy correction, the chainlike isomer HPCS is found to be kinetically and thermodynamically the most stable species followed by the chainlike HSCP, planar three-membered ring HC(S)P, chainlike HCPS, and stereo three-membered ring HP(C)S, which are predicted to be also kinetically stable isomers and should be experimentally observable provided that accurate experimental conditions are available. The dissociation processes from the kinetically and thermodynamically most stable species HPCS to the low-lying molecular dissociation fragments are not more favorable in energy than the isomerization process from HPCS to HSCP. Therefore, the experimental observation for potential isomer HSCP with C ≡ P triple bond is possible by means of photoisomerization technology using HPCS as precursor.     

Theoretical Studies on Structures and Stabilities of C4H2+ Isomers

The structures, energies, stabilities and spectroscopies of doublet C₄H₂⁺ cations were explored at the DFT/B3LYP/6-311G(d,p), CCSD(T)/6-311+G(2df,2pd)(single-point), and G3B3 levels. Ten minimum isomers including the chainlike, three-member-ring, and four-member-ring structures are interconverted by means of 15 interconversion transition states. The potential energy surface was investigated. At the CCSD(T)/6-311+G(2df,2pd) and G3B3 levels, the global minimum isomer was found to be a linear HCCCCH. The structures of the stable isomer and its relevant transition state are further optimized at the QCISD/6-311G(d,p) level. The bonding nature and structure of isomer HCCCCH were analyzed.     

Structure and Stability of Interstellar Molecule C_3S

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Theoretical prediction regarding structural and thermodynamical characteristics of stable CH3PO2 isomers and unimolecular decomposition mechanisms of species CH3P(O)2, CH3O?PO,and CH2P(O)OH

The detailed isomerization and dissociation reaction potential energy profile of the CH₃PO₂ system was established at the UCCSD(T)/6‐311++G(3df,2p)//UB3LYP/6‐311++G(d,p) level of theory. Seventy minimum isomers were located and connected by 93 optimized interconversion transition states. Furthermore, 32 isomers with high kinetic stability were predicted to be possible candidates for further experimental detection. The bonding nature of the suggested stable isomers was analyzed while their molecular properties including heats of formation, adiabatic ionization potentials, and adiabatic electronic affinities were calculated at the G2, G2(MP2), G3, and CBS‐Q levels. Based on the isomerization and dissociation potential energy surface, possible unimolecular decomposition mechanisms and pathways of the low‐lying molecules CH₃P(?O)₂, CH₃O? P?O, and CH₂?P(?O)OH were discussed. Furthermore, the transition state theory rate constants of the primary unimolecular dissociation channels were also calculated. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2009     

Inductive effects in radicals calculated from DFT energies; substituted bicyclo[2.2.2]octan-1-yloxy radicals

Energies of a series of 4-substituted 1-oxybicyclo[2.2.2]octan-1-yloxy radicals with 18 various substituents were calculated within the framework of the DFT theory at the levels UB3LYP/6-311+G(d,p)//UB3LYP/6-311+G(d,p) and UB3LYP/6-311++G(2df,p)//UB3LYP/6-311+G(d,p) and compared with similar series of the parent alcohols, their deprotonated and protonated forms calculated at the levels B3LYP/6-311+G(d,p)//B3LYP/6-311+G(d,p) and B3LYP/6-311++G(2df,p)//B3LYP/6-311+G(d,p). The two levels are of the same performance and both are sufficient for molecules of this type according to comparison with scarce experimental gas-phase acidities and basicities. The substituent effects were analyzed in terms of isodesmic equations. In addition to strong dependence on the substituent inductive effect, a slight dependence on the electronegativity of the first atom of the substituent was proven in certain cases. In all aspects, there is no qualitative difference between the effects on radicals and on similar closed shell species. Radicals behave as slightly electron deficient; the substituent effect is weaker than that on the ions but stronger than on neutral molecules.     

CH2=CHCl与O(3P)反应的理论研究

用量子化学密度泛函理论和QCISD(Quadratic configuration interaction calculation)方法,对0(^3P)与CH2CHCl的反应进行了理论研究．在UB3LYP／6—311 G(d,p),UB3LYP／6—31 (3df,3pd)计算水平上,优化了反应物、产物、中间体和过渡态的几何构型,并在UQCISD(T)／6—311 G(2df,2pO)水平上计算了单点能量．为了确证过渡态的真实性,在UB3LYP／6—311 G(3df,3pd)水平上进行了内禀坐标(IRC)计算和频率分析,并确定了反应机理．研究结果表明,反应主要产物为CH2CHO和Cl．     

Molecular structure of the trans and cis isomers of metal-free phthalocyanine studied by gas-phase electron diffraction and high-level quantum chemical calculations: NH tautomerization and calculated vibrational frequencies

The molecular structure of the trans isomer of metal-free phthalocyanine (H2Pc) is determined using the gas electron diffraction (GED) method and high-level quantum chemical calculations. B3LYP calculations employing the basis sets 6-31G**, 6-311++G**, and cc-pVTZ give two tautomeric isomers for the inner H atoms, a trans isomer having D2h symmetry and a cis isomer having C2v symmetry. The trans isomer is calculated to be 41.6 (B3LYP/6-311++G**, zero-point corrected) and 37.3 kJ/mol (B3LYP/cc-pVTZ, not zero-point corrected) more stable than the cis isomer. However, Hartree-Fock (HF) calculations using different basis sets predict that cis is preferred and that trans does not exist as a stable form of the molecule. The equilibrium composition in the gas phase at 471 degrees C (the temperature of the GED experiment) calculated at the B3LYP/6-311++G** level is 99.8% trans and 0.2% cis. This is in very good agreement with the GED data, which indicate that the mole fraction of the cis isomer is close to zero. The transition states for two mechanisms of the NH tautomerization have been characterized. A concerted mechanism where the two H atoms move simultaneously yields a transition state of D2h symmetry and an energy barrier of 95.8 kJ/mol. A two-step mechanism where a trans isomer is converted to a cis isomer, which is converted into another trans isomer, proceeds via two transition states of C(s) symmetry and an energy barrier of 64.2 kJ/mol according to the B3LYP/6-311++G** calculation. The molecular geometry determined from GED is in very good agreement with the geometry obtained from the quantum chemical calculations. Vibrational frequencies, IR, and Raman intensities have been calculated using B3LYP/6-311++G**. These calculations indicate that the molecule is rather flexible with six vibrational frequencies in the range of 20-84 cm(-1) for the trans isomer. The cis isomer might be detected by infrared matrix spectroscopy since the N-H stretching frequencies are very different for the two isomers.     

Quantum chemistry study of H+(H2O)8: a global search for its isomers by the scaled hypersphere search method, and its thermal behavior

The structures of the protonated water cluster H+(H2O)8 have been globally explored by the scaled hypersphere search method. On the Hartree-Fock potential energy surface 174 isomers were found, among which 168 were computed to be minima at the B3LYP/6-31+G** level, and their energies were further refined at the level of MP2/6-311++G(3df,2p). The global minimum on the potential energy surface computed at the B3LYP/6-31+G** level shows a cagelike structure with the "Eigen" motif, while the lowest-free-energy isomer has a five-membered-ring structure at 170 K and a chain form at 273 K. The present results are well in line with previous experimental findings. In addition, the ADMP (atom-centered density matrix propagation) simulation indicates that the extra proton in the lowest-free-energy isomer (170 K), which has a five-membered ring and the "Zundel" feature, is often in an asymmetrical hydrogen bond.     

The Dowd-Beckwith ring expansion: a theoretical study

UB3LYP/6-311++G(d,p) and ROMP2/6-311++G(d,p)//UB3LYP/6-311++G(d,p) calculations including the effect of benzene solvent through the PCM-UAHF method render a concerted mechanism without fragmentation as the most favourable one for the Dowd-Beckwith radical ring expansion of the bromomethyl adduct of methyl cyclopentanone-2-carboxylate to yield methyl cyclohexanone-3-carboxylate. The corresponding concerted TS is a bicyclic alcoxy radical.     

CH2SH与NO2双自由基反应机理的理论研究

在B3LYP/6-311＋＋G(2df,p)水平上优化了标题反应驻点物种的几何构型, 并在相同水平上通过频率计算和内禀反应坐标(IRC)分析对过渡态结构及连接性进行了验证. 采用双水平计算方法HL//B3LYP/6-311＋＋G(2df,p)对所有驻点及部分选择点进行了单点能校正, 构建了CH2SH＋NO2反应体系的单重态反应势能剖面. 研究结果表明, CH2SH与NO2反应体系存在4条主要反应通道, 两个自由基中的C与N首先进行单重态耦合, 形成稳定的中间体HSCH2NO2 (a). 中间体a经过C—N键断裂和H(1)—O(2)形成过程生成主要产物P1 (CH2S＋trans-HONO), 此过程需克服124.1 kJ•mol－1的能垒. 中间体a也可以经过C—N键断裂及C—O键形成转化为中间体HSCH2ONO (b), 此过程的能垒高达238.34 kJ•mol－1. b再经过一系列的重排异构转化得到产物P2 (CH2S＋cis-HONO), P3 (CH2S＋HNO2)和P4 (SCH2OH＋NO). 所有通道均为放热反应, 反应能分别为－150.37, －148.53, －114.42和－131.56 kJ•mol－1. 标题反应主通道R→a→TSa/P1→P1的表观活化能为－91.82 kJ•mol－1, 此通道在200～3000 K温度区间内表观反应速率常数三参数表达式为kCVT/SCT＝8.3×10－40T4.4 exp(12789.3/T) cm3•molecule－1•s－1.     

CH2FCF3与O(1D)反应机理的理论研究

用量子化学密度泛函理论(DFT)和G3(MP2)B3方法,对O(1↑D)与CH2FCF3的反应进行了研究．在UB3LYP/6-31G(d)计算水平上,优化了反应势能面上各驻点的几何结构,在G3(MP2)B3水平上进行了单点计算,并利用UB3LYP/6-311 G(3df,3pd)计算的波函数进行了电荷密度分析．通过内禀坐标(IRC)计算和振动分析,对反应过渡态进行了确认,并确定了反应机理．     

Observation of cysteine thiolate and -S...H-O intermolecular hydrogen bond

The cysteine anion was produced in the gas phase by electrospray ionization and investigated by photoelectron spectroscopy at low temperature (70 K). The cysteine anion was found to exhibit the thiolate form [-SCH2CH(NH2)CO2H], rather than the expected carboxylate form [HSCH2CH(NH2)CO2-]. This observation was confirmed by two control experiments, that is, methyl cysteine [CH3SCH2CH(NH2)CO2-] and cysteine methyl ester [-SCH2CH(NH2)CO2CH3]. The electron binding energy of [-SCH2CH(NH2)CO2H] was measured to be about 0.7 eV blue-shifted relative to [-SCH2CH(NH2)CO2CH3] due to the formation of an intramolecular -S-...HO2C- hydrogen bond in the cysteine thiolate. Theoretical calculations at the CCSD(T)/6-311++G(2df,p) and B3LYP/6-311++G(2df,p) levels were carried out to estimate the strength of this intramolecular -S-...HO2C- hydrogen bond. Combining experimental measurements and theoretical calculations yielded an estimated value of 16.4 +/- 2.0 kcal/mol for the -S-...HO2C- intramolecular hydrogen-bond strength.     

Theoretical study on structures and stability of C4P isomers

The structures, energetics, spectroscopies, and stabilities of doublet C(4)P isomeric species are explored at the DFT/B3LYP, QCISD, and CCSD(T) (singlet-point) levels. A total of 12 minimum isomers and 27 interconversion transition states are located. At the CCSD(T)/6-311G(2df)//QCISD/6-311G(d)+ZPVE level, the lowest-lying isomer is a floppy CCCCP 1 (0.0 kcal/mol) mainly featuring a cumulenic structure |C=C=C=C=P*|, which differs much from the analogous C4N radical (|*C-C[triple bond]C-C[triple bond]N|). The quasi-linearity and the low bending mode of 1 are in contrast to the previous prediction. The second energetically followed isomer PC-cCCC 3 (14.9 kcal/mol) possesses a CCC ring-bonded to CP. The two low-lying isomers are separated by a high-energy ring-closure/open transition state (26.5 kcal/mol) and thus are very promising candidates for future laboratory and astrophysical detection. Furthermore, four high-energy isomers, that is, two bent isomers CCPCC 2 (68.4 kcal/mol) and CCPCC 2' (68.5 kcal/mol) and two cagelike species 10 (56.0 kcal/mol) and 11 (67.9 kcal/mol), are also stabilized by considerable barriers. The present work is the first detailed potential energy survey of CnP clusters and can provide useful information for the investigation of larger CnP radicals and for understanding the isomerism of P-doped C vaporization processes.     

Reaction of CH2Cl with O2

The elementary reaction of CH2Cl+O2 in gas phase was investigated by time-resolved FTIR emission spectroscopy. Vibrationally excited products CO (v·4), and CO2 (o3, v·7) were observed. The yield ratio of CO/CO2(o3) was 72.2§7. The reaction pathways were studied theoretically at QCISD//UB3LYP/6-311++G(d,p) level. In the beginning of the reaction, CH2Cl radical associated with O2 to form CH2ClOO, followed by removal of the Cl atom to yield another intermediate dioxirane CH2OO. Subsequently, a series of isomerization and decomposition of the CH2OO took place, yielding the ˉnal products of CO and CO2. The calculated result was in consistent with the experimental observation.     

Kinetics of the multichannel reaction of methanethiyl radical (CH3S*) with 3O2

The CH3S* + O2 reaction system is considered an important process in atmospheric chemistry and in combustion as a pathway for the exothermic conversion of methane-thiyl radical, CH3S*. Several density functional and ab initio computational methods are used in this study to determine thermochemical parameters, reaction paths, and kinetic barriers in the CH3S* + O2 reaction system. The data are also used to evaluate feasibility of the DFT methods for higher molecular weight oxy-sulfur hydrocarbons, where sulfur presents added complexity from its many valence states. The methods include: B3LYP/6-311++G(d,p), B3LYP/6-311++G(3df,2p), CCSD(T)/6-311G(d,p)//MP2/6-31G(d,p), B3P86/6-311G(2d,2p)//B3P86/6-31G(d), B3PW91/6-311++G(3df,2p), G3MP2, and CBS-QB3. The well depth for the CH3S* + 3O2 reaction to the syn-CH3SOO* adduct is found to be 9.7 kcal/mol. Low barrier exit channels from the syn-CH3SOO* adduct include: CH2S + HO2, (TS6, E(a) is 12.5 kcal/mol), CH3 + SO2 via CH3SO2 (TS2', E(a) is 17.8) and CH3SO + O (TS17, E(a) is 24.7) where the activation energy is relative to the syn-CH3SOO* stabilized adduct. The transition state (TS5) for formation of the CH3SOO adduct from CH3S* + O2 and the reverse dissociation of CH3SOO to CH3S* + O2 is relatively tight compared to typical association and simple bond dissociation reactions; this is a result of the very weak interaction. Reverse reaction is the dominant dissociation path due to enthalpy and entropy considerations. The rate constants from the chemical activation reaction and from the stabilized adduct to these products are estimated as functions of temperature and pressure. Our forward rate constant and CH3S loss profile are in agreement with the experiments under similar conditions. Of the methods above, the G3MP2 and CBS-QB3 composite methods are recommended for thermochemical determinations on these carbon-sulfur-oxygen systems, when they are feasible.     

Structures, relative stability and dissociation of [Si,N,C,O]2+isomers

Fifteen isomers of [Si,N,C,O]2+ system are obtained at UB3LYP/6-311G(d) and UCCSD(T)/6-311+G(2df) (single-point) levels. The analyses are made for predicting the structures of optimized isomers, while ionic fragments with lower energies are suggested. The calculatedresults indicate that linear isomer SiNCO2+(2П) is thermodynamically the most stable species in [Si,N,C,O]2+ system, followed by linear SiOCN2+ (2П), SiCNO2+ (2П), and SiC(NO) (2A") with NCO three-membered ring. The order of stability of several kinetically stable isomers is SiNCO2 >SiCNO2+ (2П)>SiOCN2+ >SiC(NO)2+>OSiNC2+ (2П). The obtained results by analyzing the isomerizations and ionic fragment patterns show that the signal peaks of [Si,N,C,O]2+ are attributed to the contribution of linear SiNCO2+ species, which is metastable and can dissociate to the ionic fragments in the mass spectrometry experiments.     

Factors influencing the C?ON bond strength of the alkoxyamines in the styrene–acrylonitrile–TEMPO copolymerization system

Homolytic bond dissociation energy (BDE) of the (C? ON) bond for several N‐alkoxyamines derived from 2,2,6,6‐tetramethylpiperidine‐1‐oxyl (TEMPO) and the corresponding (C? H) bonds were determined from quantum‐mechanical calculations including the B3‐LYP6‐31G(d), B3‐LYP/6‐311++G(2df,p), UB3‐LYP/6‐311+G(3df,2p), and integrated IMOMO (G3:ROMP2/6‐31G(d)) method. The investigated N‐alkoxyamines were considered as models for dormant forms of propagating chains in the radical copolymerization process of styrene with acrylonitrile in the presence of TEMPO according to the terminal and penultimate model. The substituent effect on BDE was investigated. Radical stabilization energies (RSE) for radicals created from homolysis of the investigated N‐alkoxyamines were calculated according to Rüchardt's method. Polar, steric, and stabilization effects on C? ON alkoxyamine bond homolysis were studied. A dramatically weakened C? ON bond in the alkoxyamine‐containing two consecutive styrene units in the propagating chain was ascribed to geometric parameters characterizing energetically unfavorable conformation of the substituents. These phenomena can be regarded as the penultimate effect in the radical living/controlled copolymerization system of styrene with acrylonitrile. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 1165–1177, 2008     

Theoretical study on structures and stability of Si2CP isomers

The structures, energetics, spectroscopies, and isomerization of various doublet Si2CP species are explored theoretically. In contrast to the previously studied SiC2N and SiC2P radicals that have linear SiCCN and SiCCP ground states, the title Si2CP radical has a four-membered-ring form cSiSiPC 1 (0.0 kcal/mol) with Si-C cross-bonding as the ground-state isomer at the CCSD(T)/6-311G(2df)//B3LYP/6-311G(d)+ZPVE level, similar to the Si2CN radical. The second low-lying isomer 2 at 11.6 kcal/mol has a SiCSiP four-membered ring with C-P cross-bonding, yet it is kinetically quite unstable toward conversion to 1 with a barrier of 3.5 kcal/mol. In addition, three cyclic species with divalent carbene character, i.e., cSiSiCP 7, 7' with C-P cross-bonding and cSiCSiP 8 with Si-Si cross-bonding, are found to possess considerable kinetic stability, although they are energetically high lying at 44.4, 46.5, and 41.4 kcal/mol, respectively. Moreover, a linear isomer SiCSiP 5 at 44.3 kcal/mol also has considerable kinetic stability and predominantly features the interesting cumulenic /Si=C=Si=P/* form with a slight contribution from the silicon-phosphorus triply bonded form /Si=C*-Si[triple bond]P/. The silicon-carbon triply bonded form *Si[triple bond]C-Si[triple bond]P/ has negligible contribution. All five isomers are expected to be observable in low-temperature environments. Their bonding nature and possible formation strategies are discussed. For relevant species, the QCISD/6-311G(d) and CCSD(T)/6-311+G(2df) (single-point) calculations are performed to provide more reliable results. The calculated results are compared to those of the analogous C3N, C3P, SiC2N, and Si2CN radicals with 17 valence electrons. Implications in interstellar space and P-doped SiC vaporization processes are also discussed.     

12]Annulene radical anions revisited: evaluation of structure assignments based on computed energetic and electron spin resonance data

We report density functional and coupled cluster calculations on numerous monocyclic and bicyclic (CH)12(*-) isomers. At the RCCSD(T)/cc-pVDZ//UB3LYP/6-31+G* level, a nearly planar, bond-equalized radical anion of 1,7-di-trans-[12]annulene (4a(*-)) is lowest in energy; several other isomers and conformations lie within 3 kcal/mol of 4a(*-). RCCSD(T)/AUG-cc-pVDZ//UB3LYP/6-31+G* results place the all-cis isomer 3(*-) slightly below 4a(*-) in energy. Validation studies on the heptalene radical anion, [16]annulene radical anion, and tri-trans-[12]annulene radical anion indicate that electron spin resonance (ESR) hyperfine coupling constants (aH values) computed at the BLYP/EPR-III level on DFT geometries give much better agreement with experimental values than those computed using B3LYP/6-31G*. We were unable to locate any C12H12(*-) isomer that could account for the ESR spectrum previously attributed to a highly twisted structure for the 1,7-di-trans-[12]annulene radical anion. Our computed energetic and ESR data for [12]annulene radical anions and their valence isomers suggest that 4a(*-) may have been made, yet its ESR spectrum was incorrectly assigned to the bicyclic isomer 6b(*-). Finally, the computed (1)H NMR shift values of the dianion of 4 reveal a distinct diatropic ring current that should aid in its characterization.