代谢组学血浆样品前处理及其快速高分辨液相色谱-质谱分析方法研究

采用快速高分辨液相色谱-质谱联用技术,对代谢组学研究中血浆样品的前处理方法进行了考察及优化,建立了用于血浆中小分子代谢物分析的前处理方法.通过考察有机溶剂沉淀蛋白(不同溶剂系统)和固相萃取(Solid phase extraction,SPE)两种方法对血浆中蛋白质去除程度及16个代表性化合物的提取效果,确定采用乙腈沉...     

基质固相分散法与固相萃取法在检测水产品中己烯雌酚残留中的应用

分别建立了基质固相分散（MSPD）法、固相萃取（SPE）法与气相色谱/质谱联用（GC-MS）测定水产品中己烯雌酚（DES）残留量的分析方法,并对MSPD与SPE 2种样品前处理方法的效果进行了比较。MSPD法中样品以弗罗里硅土（Florisil）作为固相分散剂,经乙酸乙酯提取,再用Florisil净化;SPE法中样品经乙酸乙酯超声提取,过Florisil小柱进行净化,最后经GC-MS在选择离子监测模式下测定水产品中DES。在优化的色谱条件下,方法的线性范围为1-300 μg/L,相关系数为0.9985。M     

基于不同提取方法的水稻叶片蛋白质组的二维液相色谱分离及高分辨质谱分析

建立了酚法提取-二维液相色谱分离-高分辨质谱分析水稻叶片蛋白质组的方法。水稻叶片蛋白质经过酚法提取,酶解肽段脱盐后用离线反相-反相二维液相色谱分离,然后用线性离子阱/静电场轨道阱组合式高分辨质谱分析,共鉴定到2712种蛋白质。比较了液相色谱分离系统（一维液相色谱与二维液相色谱）和水稻叶片蛋白质提取方法（酚法、十二烷基硫酸钠法（SDS法）和三氯乙酸/丙酮法（TCA/丙酮法））对鉴定蛋白质数量的影响,结果表明：在二维液相色谱条件下,酚法、SDS法和TCA/丙酮法鉴定到的蛋白质数目为2712、2415和1914,分别是一维液相色谱条件下鉴定到的蛋白质数目的2.7、2.5和1.9倍。二维液相色谱条件下,酚法鉴定到的蛋白质数目比SDS法和TCA/丙酮法分别多297和798。与SDS法和TCA/丙酮法相比,酚法不但鉴定到的蛋白质数量多,而且能够鉴定到一些极端蛋白质,如酸性、碱性及高等电点的蛋白质。此外,对二维液相色谱条件下3种蛋白质提取方法提取到的蛋白质进行生物学功能分类,发现3种方法鉴定到的蛋白质的功能存在互补性,但酚法鉴定到的蛋白质功能种类最多。该法为水稻蛋白质组学研究提供了技术支撑,同时也为其他作物的蛋白质组学研究技术提供重要的借鉴。     

在线固相萃取-液相色谱-串联质谱法检测蘑菇中毒患者尿液中痕量α -鹅膏毒肽

建立了在线固相萃取-液相色谱-串联质谱（online SPE-LC-MS/MS）测定蘑菇中毒患者尿液中痕量α -鹅膏毒肽的分析方法。样品经甲酸酸化的乙腈-甲醇（5：1,v/v）沉淀蛋白质,反相液液微萃取去除样品提取液中的有机溶剂,毒素经ODS微柱（5 mm×2.1 mm,5 μm）在线SPE净化,XBridge^TM BEH C₁₈ 色谱柱（150 mm×3.0 mm,2.5 μm）分离,MS/MS测定。采用基于定量环的快速阀切换技术作为在线SPE和LC-MS/MS模块的接口,使得两个分离模块互相独立,无论是流动相还是压力,都不会互相干扰,保证了系统的稳定性;在线系统的精准净化,有效消除了后续质谱检测的基质效应,确保了尿液中痕量水平α -鹅膏毒肽的定性定量检测。尿液中α -鹅膏毒肽在0.1~50 μg/L范围内线性关系良好,相关系数（r ² ）为0.9983;检出限（LOD）为0.03 μg/L;α -鹅膏毒肽的加标（0.1、2.0和20 μg/L）平均回收率为84.3%~91.7%,相对标准偏差（RSD）为3.8%~7.2%。体内鹅膏毒肽代谢迅速,生物基质中痕量水平毒素的检测是其中毒实验室鉴定的主要难题,通过实际样品检测,证明该法操作简单,准确、灵敏;溶剂沉淀蛋白质和反相液液微萃取去除有机相和脂溶性基质的简单操作,可以作为水溶性毒素在线SPE-LC-MS/MS检测时快速且有效的配套前处理方法;基于在线SPE精准净化技术,可以实现尿液中α -鹅膏毒肽的高灵敏度测定（LOD为0.03 μg/L）,解决了中毒时患者体内痕量水平α -鹅膏毒肽定性确证的难题,部分患者α -鹅膏毒肽中毒实验室鉴定的时间可以扩展到90 h以上;同时,痕量水平的定量检测技术,可以为中毒后迅速代谢的α -鹅膏毒肽在体内的剂量反应关系研究提供可靠的技术支撑。     

嗜酸性氧化亚铁硫杆菌代谢产物的常压化学电离质谱分析

本研究以721矿和745矿嗜酸性氧化亚铁硫杆菌为研究对象,采用常压化学电离质谱直接分析其代谢产物,分别考察了顶空采样( Headspace sampling)、界面采样( Interface sampling)和中性解吸采样( Neutral desorption sampling)3种进样方式对电离效果的影响。在优化条件下,常压化学电离质谱对微生物纯菌种和混合菌种的代谢产物均具有良好的分析能力,可根据获得的代谢产物指纹谱图结合主成分分析( PCA)方法和聚类分析( CA)方法区分2个放射性强弱不同区域共4类嗜酸性微生物样品,并对主要胺类、酯类等代谢成分进行串联质谱鉴定,为耐辐射微生物的相关研究提供了一种可借鉴的分析方法。     

表面修饰探针纳升电喷雾质谱脂质组学对大型溞和蚤状溞的快速鉴别

采用表面修饰探针敞开式纳升电喷雾质谱技术建立了脂质组学方法, 以实现溞属(Daphnia)生物大型溞和蚤状溞的快速鉴别. 采用微尺度表面修饰探针直接从Daphnia体内萃取和富集出脂质化合物, 然后在常压敞开条件下进行纳升电喷雾质谱分析, 利用高分辨率质谱仪获得脂质指纹图谱并进行脂质种类和结构鉴定. 采用该方法获得了大型溞和蚤状溞的脂质指纹图谱, 并研究了大型溞和蚤状溞体内的脂质组成特征. 通过结合化学计量学手段实现了大型溞和蚤状溞的快速区分, 并鉴定了相关的生物标志物. 结果表明, 所建立的微萃取探针纳升电喷雾质谱脂质组学方法具有分析速度快、 灵敏度高的优点, 可用于Daphnia属生物的快速鉴定和识别.     

改良QuEChERS结合超高效液相色谱-四极杆/静电场轨道阱高分辨质谱法快速检测茶叶中95种除草剂残留

基于改良的QuEChERS方法,建立了超高效液相色谱-高分辨质谱同时测定茶叶中95种常见除草剂残留量的定性定量方法。实验以回收率和色素清除效率为指标,通过评估多壁碳纳米管（MWCNTs）、石墨化炭黑（GCB）、N-丙基乙二胺（PSA）和甲苯等在前处理步骤中的影响,优化了经典QuEChERS方法,最终采用含1%（v/v）乙酸的乙腈-甲苯（9：1,v/v）溶液提取,结合12.5 mg GCB、12.5 mg MWCNTs和150 mg PSA混合吸附剂净化的前处理方法。采用Hypersil Gold C18色谱柱分离,在全扫描和自动触发二级质谱（Full MS/dd-MS²）模式下,用四极杆/静电场轨道阱高分辨质谱检测,基质匹配校准曲线定量。结果表明,茶叶中95种除草剂在3个加标水平下的回收率为63.3%~129.1%,相对标准偏差（RSD）为0.7%~15.2%。该法简便、灵敏、快速、假阳性率低,适用于茶叶等复杂植物基质样品中多种除草剂的定性定量分析。     

疑似蛇毒液样品的纳升级超高效液相色谱-高分辨质谱分析鉴定

针对5个疑似蛇毒毒液及其沾染样品,基于纳升级超高效液相色谱-四极杆-静电场轨道阱高分辨质谱（Nano LC-MS/HRMS）技术,结合尺寸排阻色谱分离,建立了一种蛋白质种类及物种归属的严格鉴定方法。5个样品经尺寸排阻色谱分离后均得到3个洗脱峰,分别冻干后以胰蛋白酶进行溶液内酶解处理并进行液相色谱-高分辨质谱分析鉴定。首先采用全扫描-数据依赖型MS/MS（Full MS/dd MS²）采集模式对样品中的肽段信息进行非靶向采集,依次与Swiss-Prot、蛇亚目（Serpentes）、游蛇科（Colubroidea）、眼镜蛇科（Elapidae）、眼镜蛇亚科（Elapinae）、眼镜蛇属（Naja）蛋白质数据库逐级收缩比对;再筛选符合肽谱匹配度、肽段错误发现率小于1%和特征肽段数目大于等于2的蛋白质,共鉴定到32种蛋白质均来自中华眼镜蛇（Naja atra）,可归属于Naja atra的10个家族,主要为三指毒素、金属蛋白酶、磷脂酶A2等。最后,采用平行反应监测模式选取每种蛋白质的两条特征肽段进行靶向验证,当两条特征肽段均满足“至少75%的y⁺和b⁺离子的Δm/z小于5 ppm”时,方认为鉴定到了样品中的某一蛋白质。最终鉴定出5个样品均含有Naja atra蛇毒。此鉴定方法研究系统、严格,可为蛇毒中毒司法鉴定以及毒药物研究等提供有效的技术支持。     

UPLC-MS/MS法同时测定桃中氟吡菌酰胺和肟菌酯及其代谢产物

利用超高效液相色谱-串联质谱法（UPLC-MS/MS）,建立桃中氟吡菌酰胺及其主要代谢产物2-（三氟甲基）苯甲酰胺（BZM）和肟菌酯及其主要代谢产物肟菌酸的检测方法。去核粉碎后的桃样品经乙腈提取,C18吸附剂净化,UPLC-MS/MS分析,采用电喷雾正离子（ESI+）模式和多反应监测（MRM）,外标法定量。结果显示,在0.005～0.1 mg/L范围内,4种目标化合物的质量浓度与信号响应的峰面积均线性关系良好,相关系数（r）均大于0.99。在0.01, 0.1, 1, 3 mg/kg的添加水平下,4种目标化合物的平均回收率为77.7%～108.0%,相对标准偏差（RSD）为3.1%～17%。4种目标化合物的定量限（LOQ）均为0.01 mg/kg。该方法符合农药残留分析要求。     

高效液相色谱-串联质谱法分析大肠杆菌代谢组中样品提取方法的比较

比较了基于液相色谱和串联质谱联用技术(LC-MS/MS)的Ecoli代谢组分析的5种不同样品提取方法.在对样品进行淬灭和洗涤后,分别使用冷甲醇法、热乙醇法、甲醇/氯仿法、热甲醇法和高氯酸法对样品平行提取3次,每个样品重复进样3次.结果显示,冷甲醇法所得到的相对提取率最高,且重复性好(RSD<5%).从相对提取率、重复性...     

Identification of lipophilic bioproduct portfolio from bioreactor samples of extreme halophilic archaea with HPLC-MS/MS

Extreme halophilic archaea are a yet unexploited source of natural carotenoids. At elevated salinities, however, material corrosivity issues occur and the performance of analytical methods is strongly affected. The goal of this study was to develop a method for identification and downstream processing of potentially valuable bioproducts produced by archaea. To circumvent extreme salinities during analysis, a direct sample preparation method was established to selectively extract both the polar and the nonpolar lipid contents of extreme halophiles with hexane, acetone and the mixture of MeOH/MTBE/water, respectively. Halogenated solvents, as used in conventional extraction methods, were omitted because of environmental considerations and potential process scale-up. The HPLC-MS/MS method using atmospheric pressure chemical ionization was developed and tuned with three commercially available C₄₀ carotenoid standards, covering the wide polarity range of natural carotenoids, containing different number of OH-groups. The chromatographic separation was achieved on a C₃₀ RP-HPLC column with a MeOH/MTBE/water gradient. Polar lipids, the geometric isomers of the C₅₀ carotenoid bacterioruberin, and vitamin MK-8 were the most valuable products found in bioreactor samples. In contrast to literature on shake flask cultivations, no anhydrous analogues of bacterioruberin, as by-products of the carotenoid biosynthesis, were detected in bioreactor samples. This study demonstrates the importance of sample preparation and the applicability of HPLC-MS/MS methods on real samples from extreme halophilic strains. Furthermore, from a biotechnological point-of-view, this study would like to reveal the relevance of using controlled and defined bioreactor cultivations instead of shake flask cultures in the early stage of potential bioproduct profiling.     

Lipidomic analysis of polyunsaturated fatty acids and their oxygenated metabolites in plasma by solid-phase extraction followed by LC-MS

The present work describes the development of a robust and sensitive targeted analysis platform for the simultaneous quantification in blood plasma of lipid oxygenated mediators and fatty acids using solid-phase extraction (SPE) and high-performance liquid chromatography coupled to tandem mass spectrometry (HPLC-MS/MS). The concurrent analysis of these lipid mediators is challenging because of their instability, differences in solubility, and the frequent occurrence of isobaric forms with similar fragmentation patterns. Results demonstrated that the reduction of SPE temperature to 4 °C is a critical parameter for preserving the hydroperoxy derivatives. Polymeric HLB cartridges increased 40–50 % ARA, EPA, and DHA sensitivity compared to C18 sorbent and also provided higher global performance for most hydroxides and other oxidation products. The proposed method for the two tested mass analyzers yields high sensitivity, good linearity, and reproducibility, with detection limits ranging 0.002–7 ng/mL and global recoveries as high as 85–112 %. However, the additional advantage of the linear ion trap (LIT) mass analyzer working in full scan product ion mode, compared to the triple quadrupole (QqQ) operating in multiple reaction monitoring (MRM), should be noted: the full scan product ion mode provides the full fragmentation spectra of compounds that allowed the discrimination of coeluting isomers and false positive identifications without additional chromatography development. The proposed lipidomic procedure demonstrates a confident, simple, and sensitive method to profile in plasma a wide range of lipid eicosanoid and docosanoid mediators, including innovatively the analysis of hydroperoxy congeners and nonoxidized PUFA precursors.

Solid-phase extraction for multiresidue determination of sulfonamides, tetracyclines, and pyrimethamine in Bovine's milk

This paper describes a systematic approach to the development of a solid-phase extraction method for simultaneous extraction of 10 antibiotic residues in bovine milk, belonging to groups of sulfonamides, tetracyclines, and pyrimethamine. The sample preparation steps include acidic deproteinization of milk proteins followed by sample enrichment and cleanup using a polymer-based Oasis HLB solid-phase extraction cartridge. The analyses were carried out by using a method based on liquid chromatography-electrospray ionisation-mass spectrometry with positive ion mode. The parameters affecting the extraction efficiency such as sample loading pH, SPE wash solvent composition, and eluting solution pH were carefully investigated and optimized. The developed solid-phase extraction procedure coupled to multiresidue liquid chromatography-electrospray ionization-mass spectrometry method was applied for the analysis of 10 antibiotic residues in milk samples, and it proved to be simple, sensitive, and selective providing a recovery ranging from 70 to 106%.     

超高效液相色谱-高分辨质谱确证分析泥鳅体内五氯酚代谢物

建立了超高效液相色谱-高分辨质谱(UPLC-HRMS)鉴定泥鳅体内五氯酚代谢物五氯酚磺酸酯的方法。将在低浓度五氯酚下暴露的泥鳅样品粉碎,采用含8%(体积分数)三乙胺的70%(体积分数)乙腈水溶液提取,经混合阴离子交换小柱萃取净化,在ACQUITY BEH C18色谱柱(100 mm×2.1 mm,1.7μm)上分离,采用电喷雾负离子(ESI-)一级质谱全扫描加数据依赖的二级质谱扫描(full mass-ddMS2)模式测定,获得代谢物的准分子离子、同位素离子和二级质谱碎片离子的精确质量数。结果表明,五氯酚在泥鳅体内的代谢以磺化为主,没有发现羟基化和葡萄糖醛酸化。代谢物主要为五氯酚磺酸酯,其含量随着暴露时间(t)的延长逐渐增加,当暴露时间为36 h时达到峰值,随后逐渐减小,当t≥120 h时,五氯酚磺酸酯含量基本维持不变。该方法可用于生物体内五氯酚的代谢研究。     

On-line solid phase extraction LC-MS/MS analysis of pharmaceutical indicators in water: A green alternative to conventional methods

A method using automated on-line solid phase extraction (SPE) directly coupled to liquid chromatography/tandem mass spectrometry (LC-MS/MS) has been developed for the analysis of six pharmaceuticals by isotope dilution. These selected pharmaceuticals were chosen as representative indicator compounds and were used to evaluate the performance of the on-line SPE method in four distinct water matrices. Method reporting limits (MRLs) ranged from 10 to 25 ng/L, based on a 1 mL extraction volume. Matrix spike recoveries ranged from 88 to 118% for all matrices investigated, including finished drinking water, surface water, wastewater effluent and septic tank influent. Precision tests were performed at 50 and 1000 ng/L with relative standard deviations (RSDs) between 1.3 and 5.7%. A variety of samples were also extracted using a traditional off-line automated SPE method for comparison. Results for both extraction methods were in good agreement; however, on-line SPE used approximately 98% less solvent and less time. On-line SPE coupled to LC-MS/MS analysis for selected indicators offers an alternative, more environmentally friendly, method for pharmaceutical analysis in water by saving time and costs while reducing hazardous waste and potential environmental pollution as compared with off-line SPE methods.     

Lipid fingerprinting of gram-positive lactobacilli by intact--matrix-assisted laser desorption/ionization mass spectrometry using a proton sponge based matrix

A method of direct lipid analysis by matrix-assisted laser desorption/ionization (MALDI) mass spectrometry (MS) in intact membranes, without prior extraction/separation steps, is described. Here, we demonstrate the efficacy of a strong base, 1,8-bis(dimethylamino)naphthalene (DMAN; proton sponge), as a novel matrix for MALDI-time-of-flight (TOF) MS analysis of whole cell bacteria. Initially, individual acidic low-molecular-weight analytes such as standard free fatty acids and phospholipids were analyzed using DMAN as matrix. Clear negative-mode MALDI-TOF MS spectra of all analytes show only deprotonated analyte signals at a low picomole limit of detection with the complete absence of matrix-related signals. These results indicate that DMAN represents a suitable matrix for MALDI-TOF MS analysis of mixtures of complex lipids as the intact membranes of microorganisms. DMAN was successfully applied to the analysis of Lactobacillus sanfranciscensis and L. plantarum microorganisms. Different components were sensitively detected in a single spot, including 16:0, 18:2, 18:3, and 21:0 free acids, glycolipids, phosphatidylglycerols (PGs) and cardiolipins. This method might be of general application, offering the advantage of quickly gaining information about lipid components of other gram-positive bacterial membranes.     

New insight in the structural features of haloadaptation in α-amylases from halophilic Archaea following homology modeling strategy: folded and stable conformation maintained through low hydrophobicity and highly negative charged surface

Proteins from halophilic archaea, which live in extreme saline conditions, have evolved to remain folded, active and stable at very high ionic strengths. Understanding the mechanism of haloadaptation is the first step toward engineering of halostable biomolecules. Amylases are one of the main enzymes used in industry. Yet, no three-dimensional structure has been experimentally resolved for α-amylases from halophilic archaea. In this study, homology structure modeling of α-amylases from the halophilic archaea Haloarcula marismortui, Haloarcula hispanica, and Halalkalicoccus jeotgali were performed. The resulting models were subjected to energy minimization, evaluation, and structural analysis. Calculations of the amino acid composition, salt bridges and hydrophobic interactions were also performed and compared to a set of non-halophilic counterparts. It clearly appeared that haloarchaeal α-amylases exhibited lower propensities for helix formation and higher propensities for coil-forming regions. Furthermore, they could maintain a folded and stable conformation in high salt concentration through highly negative charged surface with over representation of acidic residues, especially Asp, and low hydrophobicity with increase of salt bridges and decrease in hydrophobic interactions on the protein surface. This study sheds some light on the stability of α-amylases from halophilic archaea and provides strong basis not only to understand haloadaptation mechanisms of proteins in microorganisms from hypersalines environments but also for biotechnological applications.     

An LC-MS-MS Method for the Determination of Perfluorinated Surfactants in Environmental Matrices

Recently, there has been increasing concern about perfluorinated surfactants, especially perfluorooctane sulfonate (PFOS) and perfluorooctanoate (PFOA) due to their persistence and chronic toxicity in the aquatic environment. Solid phase extraction (SPE) followed by liquid chromatography coupled with tandem mass spectrometry (LC-MS-MS) are widely applied to quantitatively identify PFOS and PFOA. However, the application of this powerful analytical technique is limited by matrix susceptibility. The co-eluting matrix components in the SPE extracts affect the ionization efficiency and lead to erroneous results. An efficient sample clean-up method was developed in this study to significantly remove co-eluting matrix components by applying the SPE extracts onto a silica cartridge. It was shown that matrix effect (ME%) increased to >70% for both PFOS and PFOA in the analysis of raw sewage. Internal standardization was used to further compensate for the matrix effect, which also proved to improve the signal reproducibility. The clean-up method described in this study was applied to different water samples (surface water and wastewater) to evaluate the efficiency of silica clean-up and the influence of sample origin on the matrix effect. ME% and recovery efficiency (RE%) were in the range of 91.9–98.3% and 89.2–98.0%, respectively. Results showed that the developed method is robust and can be applied to analyze PFOS and PFOA in different environmental matrices.     

SPE – Microwave‐assisted extraction coupled system for the extraction of pesticides from water samples

SPE is a commonly applied technique for preconcentration of pesticides from water samples. Microwave‐assisted extraction (MAE) technique is the extraction applied for preconcentration of different compounds from solid samples. SPE coupled with MAE is capable of preconcentrating these compounds from water samples too. This investigation was aimed at improving the efficiency of atrazine, alachlor, and α‐cypermethrin pesticide extraction from the spiked water samples applying SPE followed by MAE. In this way, MAE served for elution of pesticides from C₁₈‐extraction disks with solvent heated by microwave energy. Various elution conditions were tested for their effects on the extraction efficiency of the SPE–MAE combined technique. Several parameters, such as elution solvent volume (mL), elution temperature (°C), and duration of elution (min), affect the extraction efficiency of the SPE–MAE coupled system and need to be optimized for the selected pesticides. In order to develop a mathematical model, 15 experiments were performed in the central composite design. The equation was then used to predict recoveries of the pesticides under specific experimental conditions. Optimization of microwave extraction was accomplished using the genetic algorithm approach. Best results were achieved using 20 mL of ethanol at 60°C. Optimal hold time was 5 min and 24 s. The SPE–MAE combination was also compared with the conventional SPE extraction technique with elution of a nonpolar or a moderately polar compound with nonpolar solvents.     

Optimization and evaluation of a procedure for the gas chromatographic-mass spectrometric analysis of the aromas generated by fast acid hydrolysis of flavor precursors extracted from grapes

A procedure has been developed for the GC-MS analysis of the aromas released in fast acid hydrolysis of precursor fractions from grape musts and skins. Different sorbents for the extraction of the precursors were compared. The best results were obtained with LiChrolut EN polymeric resins which displayed two and six-fold more extraction capacity than Amberlite XAD-2 resins and C18 sorbents, respectively. C18 sorbents are more suitable for selective extraction of less polar precursors. The initial version of the method was imprecise and so the imprecision of the different steps was assessed. The maceration of the solid parts and the liquid-liquid extraction of the aromas released in the acid hydrolysis proved to be the critical steps. Greater crushing of the solid parts and solid-phase extraction (SPE) instead of liquid-liquid extraction (LLE) improved reproducibility. In the method finally proposed about 100 aromatic components belonging to four large groups (lipid derivatives, shikimic acid derivatives, norisoprenoids and terpenes) were determined with good reproducibility. Important aroma compounds, such as cis-rose oxide or wine lactone were detected in non-Muscat grapes.