Behavior and process of background signal formation of hydrogen,carbon, nitrogen,and oxygen in silicon wafers during depth profiling using dual-beam TOF-SIMS

The behavior and mechanism of background signals during depth profiling of atmospheric elements using dual-beam time-of-flight secondary ion mass spectrometry (TOF-SIMS) have been experimentally investigated for silicon wafers. The background signals of atmospheric elements were found to be inversely proportional to the sputtering rate. Most of the background signals are largely attributable to the accumulation of components through adsorption and ion bombardment in the pre-equilibrium state. On the other hand, the contribution of real-time adsorption during the instant after the last sputtering in the equilibrium state is negligible under the present experimental conditions. H₂O is dominant in the background formation process of hydrogen and oxygen, which is supported by the higher adsorption coefficients. The background levels of carbon and nitrogen are lower than those of hydrogen and oxygen. Furthermore, the background signal of carbon with respect to the sputtering rate shows a different trend than the other elements. This could be attributed to accumulation in the pre-equilibrium state. These results indicate that the background levels can be lowered close to those of dynamic-SIMS by using an extremely high sputtering rate in dual-beam TOF-SIMS.     

In silico modeling of PAX8–PPARγ fusion protein in thyroid carcinoma: influence of structural perturbation by fusion on ligand-binding affinity

Journal of Computer-Aided Molecular Design - Paired box 8 (PAX8)–peroxisome proliferator-activated receptor γ (PPARγ) rearrangement is believed to play an important role in...     

Exfoliation of graphite by dry ball milling with cellulose

Dry ball milling of graphite with cellulose and related polysaccharides was found effective for exfoliation-dispersion of graphene-like carbon. The exfoliation behavior was found to depend strongly on the polymer species; namely, polysaccharides are much more effective than thermoplastic polymers. The compression-molded slabs from co-milled powder with cellulose and carboxymethylcellulose showed an electrical percolation threshold of 1.0 % (w/w) or lower. The carbon fraction isolated from milling with carboxymethylcellulose was water-dispersible, containing single- to few-layer graphenes. This method can provide facile and solventless graphene exfoliation and mechanical alloying with polymers.     

Complexation of hydrazine with native cellulose in water and toluene

Adsorption–complexation of cellulose by hydrazine solutions in water and toluene was studied for native cellulose of varied crystallinity. Penetration of hydrazine into cellulose takes place more readily in hydrazine solution of higher concentration and with cellulose of lower crystallinity, but the equilibrium uptake was nearly independent of crystallinity. Complexation from toluene solution takes place at lower hydrazine concentration in toluene than in water, presumably because of the difference in hydrazine–solvent interaction. The adsorption isotherm of hydrazine in water is likely to be sigmoid, implying a cooperative sorption mechanism. It can presumably be ascribed to the disordered structure in the course of complexation.     

Formation and stability of cellulose–copper–NaOH crystalline complex

We investigated the crystal structure of alkali-celluloses, Na-cellulose IIA and II(Cu), formerly known as Na-cellulose IIB, by synchrotron X-ray diffraction. Na-cellulose IIA, formed from cellulose I by high-concentration NaOH treatment, has a fiber repeat of 15 Å and a threefold-like helical conformation. Na-cellulose II(Cu), prepared by treating cellulose I with copper-saturated alkali solution, also has a fiber repeat of 15 Å with threefold helical symmetry. Incorporation of Cu(II) ions into cellulose was confirmed by multiwavelength anomalous diffraction. Monitoring by X-ray diffraction revealed that the formation of this complex from cellulose I is remarkably slow, probably because of the involvement of copper ion. The stability of alkali-cellulose II(Cu) was tested to estimate the influence of the presence of copper in the crystal. Na-cellulose II(Cu) characteristically dissolved in aqueous ammonia solution, indicating strong coordination of copper ion to cellulose.     

Effects of lignin and hemicellulose contents on dissolution of wood pulp in aqueous NaOH/urea solution

Four species of delignified woodchips with about 1 % lignin content (Chlorite–Woodchips) and a series of softwood pulps with different lignin contents were prepared by sodium chlorite delignification. After mechanical defibration, some Chlorite–Woodchips were directly subjected to dissolution treatment in NaOH/urea solvent; the others were first treated with NaOH solution to remove the hemicellulose to obtain NaOH–Chlorite–Woodchips or oxidized with potassium permanganate (OPP) to remove lignin completely to obtain OPP–Chlorite–Woodchips, and then subjected to the dissolution in NaOH/urea solvent. The results showed that the dissolved proportion of the Chlorite–Woodchips ranged from 36 to 46 %, the dissolved proportion of glucan was within 12 %, and most of the hemicellulose was dissolved in NaOH/urea solvent. Compared with Chlorite–Woodchips, the dissolved proportion of NaOH–Chlorite–Woodchips was lower, but their dissolved proportion of glucan was higher. After further permanganate delignification, both the dissolved proportion of the OPP–Chlorite–Woodchips and the dissolved proportion of glucan of the OPP–Chlorite–Woodchips were higher than those of the Chlorite–Woodchips. However, the dissolved proportion of glucan was still limited to only 15–30 %. The effect of the lignin content of softwood pulps on their dissolution is complicated. With the decrease of the lignin content of softwood pulp from 6.9 to 2.8 %, the dissolved proportion of pulp increased from 14 to 26 %. However, further reduction of lignin content from 2.8 to 0.3 % led to a decrease in the dissolved proportion of pulp from 26 to 12 %. The dissolved proportion of glucan followed the same tendency. These results indicated that the dissolution of wood cellulose in NaOH/urea solvent is not simply controlled by the hemicellulose and lignin contents, but also by some other factors.     

An application of fragment interaction analysis based on local MP2

We have developed a method named ‘fragment interaction analysis based on local MP2’ (abbreviated as FILM). This method enables us to decompose the interaction energy associated with dispersion interactions into contributions of localized occupied orbitals. In this study, the basis set dependence of the results derived from FILM was examined. The results suggested that the individual ratio of pair correlation energies of selected orbital pairs to the total dispersion interaction was almost independent of the basis set size. As an illustrative example, detailed analysis was performed on the human immunodeficiency virus type 1 protease complexed with lopinavir molecule.     

Practical method for the synthesis of polysilanes using Mg and Lewis acid system

Reduction of dichlorosilanes with Mg metal in the presence of Lewis acid and LiCl was found to be the highly practical method for the synthesis of polysilanes.     

First-principles energy band calculation for undoped and N-doped InTaO4 with layered wolframite-type structure

The electronic structures of undoped and N-doped InTaO₄ with optimized structures are calculated within the framework of the density functional theory. Calculated lattice constants are in excellent agreement with experimental values, within a difference of 2%. The valence band maximum (VBM) is located near the middle point on the ZD line and the conduction band minimum (CBM) near the middle point on the DX line. This means that InTaO₄ is an indirect-gap material and a minimum theoretical gap between VBM and CBM is ca. 3.7 eV. The valence band in the range from −6.0 to 0 eV mainly consists of O 2p orbitals, where In 4d5s5p and Ta 5d orbitals are slightly hybridized with O 2p orbitals. On the other hand, the conduction band below 5.5 eV is mainly composed of the Ta 5d orbitals and the contributions of In and O orbitals are small. The band gap of N-doped InTaO₄ decreases by 0.3 eV than that of undoped InTaO₄, because new gap states originating from N 2p orbitals appear near the top of the valence band. This result indicates that doping of N atoms into metal oxides is a useful method to develop photocatalysts sensitive to visible light.