DNAzyme-Mediated Genetically Encoded Sensors for Ratiometric Imaging of Metal Ions in Living Cells

Genetically encoded fluorescent proteins (FPs) have been used for metal ion detection. However, their applications are restricted to a limited number of metal ions owing to the lack of available metal-binding proteins or peptides that can be fused to FPs and the difficulty in transforming the binding of metal ions into a change of fluorescent signal. We report herein the use of Mg²⁺-specific 10–23 or Zn²⁺-specific 8–17 RNA-cleaving DNAzymes to regulate the expression of FPs as a new class of ratiometric fluorescent sensors for metal ions. Specifically, we demonstrate the use of DNAzymes to suppress the expression of Clover2, a variant of the green FP (GFP), by cleaving the mRNA of Clover2, while the expression of Ruby2, a mutant of the red FP (RFP), is not affected. The Mg²⁺ or Zn²⁺ in HeLa cells can be detected using both confocal imaging and flow cytometry. Since a wide variety of metal-specific DNAzymes can be obtained, this method can likely be applied to imaging many other metal ions, expanding the range of the current genetically encoded fluorescent protein-based sensors.     

Highly alkaline stable anion exchange membranes from nonplanar polybenzimidazole with steric hindrance backbone

The anion exchange membranes (AEMs) with both high ionic conductivity and alkali stability are always the research focus of the AEM fuel cells. Here, a novel nonplanar polymer for AEMs manufacture, mPBI‐TP‐x‐R, with excellent hydroxide stability and satisfactory processability is reported for the first time. The serial mPBI‐TP‐x resins with steric hindrance were prepared by copolymerization among 3,3′,4,4′‐tetraaminobiphenyl, isophthalic acid and tetraphenyl‐terephthalic acid (TP) in different ratios under microwave condensation. The copolymers mPBI‐TP‐x were quaternized at N1/N3‐sites of benzimidazole unit in backbone with alkyl groups (R?CH₃, C₂H₅, n‐C₃H₇, or n‐C₄H₉) to prepare soluble ionomers, and the corresponding membranes in hydroxyl ion form were prepared by a solution casting method and subsequent ion‐exchange process. The chemical structure of all membranes was characterized using FTIR and ¹H NMR spectroscopy. The properties of ion exchange capacity, water uptake, swelling ratio, tensile strength, ionic conductivity, and alkaline stability were measured. Among the prepared membranes, the mPBI‐TP‐15%‐(n‐Bu) exhibited the excellent alkaline stability (only degradation ca. 5% under 1M NaOH aqueous solution at 60 °C for 800 h) and satisfactory OH^? conductivity (46.66 mS/cm at 80 °C). The current research provides a useful exploration to commercial application of alkaline fuel cell. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019 , 57, 1087–1096     

Energy-preserving algorithm for gyrocenter dynamics of charged particles

Numerical Algorithms - Gyrocenter dynamics of charged particles plays a fundamental and important role in plasma physics, which requires accuracy and conservation in a long-time simulation....     

A Tree-valued Markov Process Associated with an Admissible Family of Branching Mechanisms

Let E?R be an interval. By studying an admissible family of branching mechanisms{ψt,t ∈E} introduced in Li [Ann. Probab., 42, 41-79(2014)], we construct a decreasing Levy-CRT-valued process {Tt, t ∈ E} by pruning Lévy trees accordingly such that for each t ∈E, Tt is a ψt-Lévy tree. We also obtain an analogous process {Tt*,t ∈E} by pruning a critical Levy tree conditioned to be infinite. Under a regular condition on the admissible family of branching mechanisms, we show that the law of {Tt,t ∈E} at the ascension time A := inf{t ∈E;Tt is finite} can be represented by{Tt*,t∈E}.The results generalize those studied in Abraham and Delmas [Ann. Probab., 40, 1167-1211(2012)].     

Necessary and Sufficient Conditions for Qualitative Properties of Infinite Dimensional Linear Programming Problems

Necessary and sufficient conditions for qualitative properties of infinite dimensional linear programing problems such as solvability, duality, and complementary slackness conditions are studied in this article. As illustrations for the results, we investigate the parametric version of Gale’s example.     

Comparative pharmacokinetic study of four major bioactive components after oral administration of Zhi‐Zi‐Hou‐Po decoction in normal and corticosterone‐induced depressive rats

A highly selective and efficient LC–MS/MS method was developed to determine the plasma concentration of magnolol, hesperidin, neohesperidin and geniposide following oral administration of Zhi‐Zi‐Hou‐Po decoction in normal and depressed rats. Plasma samples were pretreated by protein precipitation with methanol. Chromatographic separation was performed on an XTerra^® MS C₁₈ column using a gradient elution with a mobile phase composed of acetonitrile–0.1% aqueous formic acid. The proposed method was validated to be specific, accurate and precise for the analytes determination in plasma samples. The calibration curves displayed good linearity over definite concentration ranges for the analytes. The intra‐ and inter‐day precision of the proposed method at three different levels were all within <11.13% and the relative errors ranged from ?8.46 to 8.93%. The recovery of the four compounds ranged from 82.72 to 89.08% and no apparent matrix effect was observed during sample analysis. After full validation, the established method was successfully applied for comparing the pharmacokinetics of four components between normal and depressed rats. The results showed that the AUC and C_max of four analytes in depressed rats were significantly different from those in normal rats and might provide helpful information to guide the clinical use of Zhi‐Zi‐Hou‐Po to treat depression.     

Symplectic integrators with adaptive time step applied to runaway electron dynamics

Numerical Algorithms - Studying the dynamics of runaway electrons has theoretical and practical significance. As the system is highly relativistic, multi-scale and nonlinear, accurate and efficient...     

Self‐emulsion polymerization of amphiphilic monomers—a green route to synthesis of polymeric nanoscaffolds

Self‐emulsion polymerization (SEP), a green route developed by us for the polymerization of amphiphilic monomers, does not require any emulsifier or an organic solvent except that the water‐soluble initiators such as 2,2′‐azobis[2‐(2‐imidazolin‐2‐yl)propane]dihydrochloride (VA‐044) and potassium persulfate (KPS) are only used. We report here the polymer nanoscaffolds from a number of amphiphilic monomers, which can be used for in situ encapsulation of a variety of nanoparticles. As a demonstration of the efficacy of these nanoscaffolds, the synthesis of a biocompatible hybrid nanoparticle (nanohybrid), prepared by encapsulating Fe₃O₄ magnetic nanoparticle (Fe₃O₄ MNPs) in poly(2‐hydroxyethyl methacrylate) in water, for MRI application is presented. The nanohybrid prepared following the SEP in the form of an emulsion does not involve the use of any stabilizing agent, crosslinker, polymeric emulsifier, or surfactant. This water‐soluble, spherical, and stable nanohybrid containing Fe₃O₄ MNPs of average size 10 ± 2 nm has a zeta potential value of ?41.89 mV under physiological conditions. Magnetic measurement confirmed that the nanohybrid shows typical magnetic behavior having a saturation magnetization (Ms) value of 32.3 emu/g and a transverse relaxivity (r2) value of 29.97 mM^?1 s^?1, which signifies that it can be used as a T2 contrast agent in MRI. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019     

Cutoff Phenomenon for Nearest Lamperti’s Random Walk

Methodology and Computing in Applied Probability - We consider transient neighbor random walks on the positive part of the real line, the transition probability is state dependent being a special...