Computational study of conformational preferences of thioamide-containing azaglycine peptides

The effect of thioamide substitution on the conformational stability of an azaglycine-containing peptide, For-AzaGly-NH2 (1), was investigated for the sake of finding possible applications by using ab initio and DFT methods. As model compounds, For-[psiCSNH]-AzaGly-NH2 (2), For-AzaGly-[psiCSNH]-NH2 (3), and For-[psiCSNH]-AzaGly-[psiCSNH]-NH2 (4) were used. Two-dimensional phi-psi potential energy surfaces (PESs) for 2-4 were calculated at the B3LYP/6-31G*//HF/6-31G* level in gas (epsilon = 1.0) and in water (epsilon = 78.4) by applying the isodensity polarizable continuum model (IPCM) method. On the basis of these PESs, the minimum energy conformations for 2-4 were characterized at the B3LYP level with 6-31G*, 6-311G**, and 6-31+G** basis sets. The remarkable structural effect of thioamide substitution for 2-4 is that beta-strand structure is observed as a global or local minimum. The minima of 2-4 are also compared with those for glycine and thioamide-containing glycine peptides. Our theoretical results demonstrate that compounds 2-4 would be used to design controllable secondary structures.     

Molecular Replacement Studies of Cucurmosin from Cucurbita Moschata:Structure Homology with Trichosanthin

1 INTRODUCTION Many plants contain proteins that are capable of inactivating ribosomes and therefore are called ribosome-inactivating proteins or RIPs[1]. RIPs are RNA N-glycosidases that inactivate ribosomes through a site-specific deadenylation of the large ribosomal RNA[2, 3]. RIPs are also capable of inactivating many nonribosomal nucleic acid substrates and can be considered as polynucleotide: adenosine glycosidases[4～6]. There are two types of RIPs: type I, single chain pr…     

Density Functional Theory Study on the Adsorption of Dioxygen on Small Pt-Pd Clusters

1 INTRODUCTION The bimetallic nanoclusters are of standing inte- rest since they can exhibit catalytic, electronic and optical properties distinct from those of corre- sponding pure nanoclusters[1～4]. Palladium and pla- tinum, well known for their catalytic properties, are often used as the catalyst in different fuel cells[5～8]. Several experimental results illustrate that for the oxygen reduction reaction (ORR), which is one of the primary reactions taking place in many fuel cells and…     

氮中二氧化硫标准气体定值方法的研究

介绍用脉冲荧光分析仪对氮中二氧化硫标准气体定值的分析方法,对方法的精密度、准确度及定值的不确定度进行了考察。该方法的定值结果与重量法的配制值相一致。用该法对荷兰国家计量院制备的氮中二氧化硫标准气体进行比对试验,取得了良好的等效性。     

铝与溴代二甲氨基苯基荧光酮的多元配合物的光度研究

本文研究了在表面活性剂存在性，铝与溴代二甲氨基苯基荧光酮的显色反应。在弱酸性介质中，Ａｌ＾３＋ＢＤＭＡＦ－ＣＴＭＡＢ三元配合物在水浴加热至７０℃－８０℃时形成，其最大吸收波长为５７７ｎｍ，Ａｌ＾３＋：ＢＤＭＡＦ＝１：２，表观摩尔吸光系数为１．３４×１０＾５Ｌ．ｍｏｌ＾－１．ｃｍ＾－１，表观稳定常数为７．４×１０＾５。在ＰＨ９．５－１０．５的氨性缓冲介质中，Ａｌ＾３＋－Ｆ＾－－ＢＤＭＡＦ－非离子表面     

研磨法合成1,2,3,6-四氢嘧啶-2-酮衍生物

以NH₂SO₃H为催化剂, 室温无溶剂条件下, 研磨芳醛、β-酮酸酯和尿素合成了一系列1,2,3,6-四氢嘧啶-2-酮衍生物. 该方法具有反应条件温和、操作简便、环境友好、产率高等优点.     

信息型常见毒物质谱用户库的建立及其在毒物快速筛选上的应用研究

质谱定性是目前世界上最通用的定性分析方法之一,在法庭科学领域毒物分析实践中,质谱一直是对未知样品进行药毒物筛选检测的利器.     

Calcined Ni—Al layered double hydroxide as a catalyst for total oxidation of volatile organic compounds: Effect of precursor crystallinity

The effect of hydrothermal treatment on properties (crystallinity, porous structure, reducibility, acidity, basicity, and catalytic activity and selectivity in toluene and ethanol total oxidation) of Ni—Al layered double hydroxide precursors and related mixed oxides was examined. The hydrothermal treatment increased considerably both the content of crystalline phase and LDH crystallite size. On the other hand, only a slight effect of the precursor hydrothermal treatment on crystallinity of the related Ni—Al mixed oxides obtained by calcination at 450°C was observed. The reducibility of NiO particles appeared to be hindered considerably compared to the reducibility of pure NiO. Catalytic activity of the Ni—Al mixed oxides prepared from the precursors hydrothermally treated for a short time (4 h) was the highest. The highest amount of acetaldehyde formed during the total oxidation of ethanol, i.e. the worst selectivity was found for the calcined Ni—Al LDH without hydrothermal treatment. Presented at the 33rd International Conference of the Slovak Society of Chemical Engineering, Tatranské Matliare, 22–26 May 2006.     

催化动力学极谱法测定痕量钼

在稀Ｈ２ＳＯ４介质中，钼（Ⅵ）对硫酸联氨还原乙基橙的反应有强烈的催化作用。建立了催化动力学极谱法测定痕量钼的新体系，方法线性范围为２０－３００ｎｇ／ｍＬ，检出限为３．５４ｎｇ／ｍＬ。方法应用于尿中中钼的测定，结果满意。