Efficient electrospray ionization from polymer microchannels using integrated hydrophobic membranes

A simple process for realizing stable and reliable electrospray ionization (ESI) tips in polymer microfluidic systems is described. The process is based on the addition of a thin hydrophobic membrane at the microchannel exit to constrain lateral dispersion of the Taylor cone formed during ESI. Using this approach, ESI chips are shown to exhibit well-defined Taylor cones at flow rates as low as 80 nL min(-1) through optical imaging. Furthermore, stable electrospray current has been measured for flow rates as low as 10 nL min(-1) over several hours of continuous operation. Characterization of the electrospray process by optical and electrical monitoring of fabricated ESI chips is reported, together with mass spectrometry validation using myoglobin as a model protein. The novel process offers the potential for low-cost, direct interfacing of disposable polymer microfluidic separation platforms to mass spectrometry.     

Self-assembling of helical poly(phenylacetylene) carrying L-valine pendants in solution, on mica substrate, and on water surface

In the present work, we investigated self-assembling of a poly(phenylacetylene) carrying L-valine pendants (PPA-Val) in a water/methanol solution, upon evaporation of the solution on mica, and on the water surface. With intercalation of a fluorescence probe of Ru(phen)2(dppx)2+ (phen = 1,10-phenanthroline, dppx=7,8-dimethyldipyridophenazine) into the hydrophobic cavities associated by the PPA-Val chains, their helical structures were directly detected in solution with an in situ fluorescence microscope. Helical aggregates were observed with AFM upon evaporation of the solvents, suggesting that the helical structures in the solution are the building blocks of the helical aggregates. Self-assembling structures of PPA-Val on the water surface were, however, very different from that formed upon evaporation of its THF solution on the mica surface. The polymer chains associated into a monolayer of extended fibers on the water surface, whereas superhelical fibers formed on the mica surface. Water molecules play a critical role in inducing the polymer to form diverse morphological structures in its bulk solution and on its surface. In solution, the isotropic hydrophobic effect drove the polymer chains to form superhelical aggregates, while on the water surface, the hydrophobic effect concentrated mainly on the lateral part of the polymer, thus giving a monolayer of extended fibers.     

氧化钡促进的Co/SiO2催化剂的还原性能和分解甲烷活性

 利用等体积浸渍法制备了氧化硅负载钴催化剂．通过程序升温还原、氢化学吸附、氧滴定和催化活性评价等手段研究了氧化钡对Co／SiO2的还原性能、钴分散度和颗粒度、分解甲烷活性及其稳定性等的影响．研究结果表明，氧化钡明显地影响Co／SiO2的还原性能；添加2％氧化钡提高了Co／SiO2在中温（450℃）条件下的还原度；氧化钡的还原对Co／SiO2还原的诱导、氧化钡与氧化硅及与氧化钴之间的相互作用是导致Co／SiO2还原性能变化的原因．氧化钡提高了Co／SiO2的初活性和钴的分散度，降低了钴的颗粒度；添加0．5％～1．5％氧化钡有利于提高Co／SiO2的稳定性．钴的分散度和颗粒度影响Co／SiO2的活性和稳定性；氧化钡的强供电效应也是提高Co／SiO2活性和稳定性的重要因素．甲烷分解生成的碳物种覆盖了钴活性中心，导致Co／SiO2初活性下降；但大部分碳物种并不沉积在钴活性中心上，可能形成了碳纤维生长在载体和钴活性中心之间．     

Flexible ligand docking without parameter adjustment across four ligand–receptor complexes

Understanding molecular recognition is one of the fundamental problems in molecular biology. Computationally, molecular recognition is formulated as a docking problem. Ideally, a molecular docking algorithm should be computationally efficient, provide reasonably thorough search of conformational space, obtain solutions with reasonable consistency, and not require parameter adjustments. With these goals in mind, we developed DIVALI (Docking wIth eVolutionary AlgorIthms), a program which efficiently and reliably searches for the possible binding modes of a ligand within a fixed receptor. We use an AMBER-type potential function and search for good ligand conformations using a genetic algorithm (GA). We apply our system to study the docking of both rigid and flexible ligands in four different complexes. Our results indicate that it is possible to find diverse binding modes, including structures like the crystal structure, all with comparable potential function values. To achieve this, certain modifications to the standard GA recipe are essential. © 1995 John Wiley & Sons, Inc.     

Two-, three-, and four-coordinate Ag(I) coordination polymers formed by the novel phosphinite PPh2(3-OCH2C5H4N)

The novel phosphinite PPh(2)(3-OCH(2)C(5)H(4)N) (1) has been synthesized, and its coordination properties to Ag(I) have been studied. When reacted in a 1:1 ratio with Ag(I), coordination polymers with different coordination numbers about the Ag are found depending on the anion. For PPh(2)(3-OCH(2)C(5)H(4)N)AgBF(4) (2), a two-coordinate Ag is observed with a P-Ag-N angle of 167 degrees. Mixed three and four coordination about Ag is observed for PPh(2)(3-OCH(2)C(5)H(4)N)AgOTf (3), and for the trifluoroacetate derivative, PPh(2)(3-OCH(2)C(5)H(4)N)Agtfa (4), only a four-coordinate Ag is produced. X-ray crystal-structure determinations for compounds 2-4 have been carried out. The X-ray structures show a wide range of Ag-Ag distances in the polymers, which are dependent on the conformation of the bridging ligand.     

Acid-Catalyzed Amine-Borane Reduction of Nitrite

The rate of reduction of nitrite by trimethylamine-borane was followed by observing the decrease in nitrite absorbance under pseudo-first-order conditions. The reaction is acid-catalyzed and exhibits a first-order dependence on both amine-borane and total nitrite concentration. The molar equivalence of NaNO(2) to (CH(3))(3)NBH(3) = 2:1. Equimolar amounts of hydrogen and nitrous oxide are formed, and the molar ratio of nitrite reacted to N(2)O produced is 2:1. In concentrated HCl or H(2)SO(4), a correlation of rate with the Hammett acidity function, h(o), is observed. The reaction is subject to a pronounced inversesolvent isotope effect (k(D)()2(O)/k(H)()2(O) approximately 2.7) and a modest normal substrate effect (k((CH)()3())()3(N.BH)()3/k((CH)()3())()3(N.BD)()3 approximately 1.4). The reaction is first-order in H(3)O(+) in the region pH 0.7-2.7, but a second-order dependence is observed above pH 4 with the transition occurring at pH approximately pK(a) for HNO(2). Results are consistent with a mechanistic model involving preequilibration protonation of molecular nitrous acid followed by rate-limiting hydride attack on H(2)ONO(+) or free NO(+) to produce nitrosyl hydride as a reactive intermediate.     

Determination of atrazine, its degradation products and metolachlor in runoff water and sediments using solid-phase extraction

In order to determine the fate of the herbicides atrazine (as well as some of its degradation products) and metolachlor in water and sediments, a method was developed to extract and analyse these compounds. The two matrices were separated completely by centrifugation followed by filtration using nylon filters (0.45 mum). Sediments were extracted with a mixture of methanol-0.1N hydrochloric acid (50:50, v/v) using a wrist-action shaker. Filtered water and extracts of sediments were adjusted to pH 4, then concentrated and purified onto two solid-phase extraction cartridges using in tandem C(18) bonded phase column atop sulfonic acid bonded column (SCX). Atrazine, deethylatrazine, deisopropylatrazine and metolachlor retained by the C(18) column were eluted with ethyl acetate. Chlorodiaminotriazine and hydroxyatrazine retained by the SCX column were eluted with a 50:50 (v/v) acetonitrile-0.1M Na(2) HPO(4) aqueous solution (pH 8.5). The extracts were quantified by high performance liquid chromatography with diode array detector (HPLC-DAD) and by gas chromatography with nitrogen-phosphorus detector (GC-NPD). Overall percent recoveries were about 75% and detection limits were between 0.05 and 0.15 microg/l., and 0.5 and 1.5 microg/kg for water and sediments, respectively.     

Ordering the reductive and cytochrome P450 oxidative steps in demethylsterigmatocystin formation yields general insights into the biosynthesis of aflatoxin and related fungal metabolites

The biosynthesis of the potent environmental carcinogen aflatoxin B1 involves ca. 15 steps beyond the first polyketide intermediate. Central among these is the rearrangement of the anthraqinone versicolorin A to the xanthone demethylsterigmatocystin. Genetic evidence strongly suggests that two enzymes are required for this process, a cytochrome P450, AflN, and a probable NADPH-dependent oxidoreductase, AflM. Given the overall redox change evident in this skeletal rearrangement, two rounds of oxidation and a reduction necessarily occur. Earlier experiments indicated that reductive deoxygenation of versicolorin A is not the first step. In the present report we consider a mechanistic alternative that AflM-mediated reduction is instead the last of these three reactions prior to formation of the xanthone intermediate. To this end, 9-hydroxydihydrodemethylsterigmatocystin was prepared by total synthesis as was its 9-deoxy analogue, an established aflatoxin precursor. During the final isolation of the "angular" synthetic xanthone targets it was found that acid catalysis promoted their isomerization to thermodynamically favored "linear" xanthones. Whole-cell and ground-cell incubations of the 9-hydroxy- and 9-deoxyxanthones were conducted with a mutant strain of Aspergillus parasiticus blocked at the first step of the pathway and examined for their ability to support aflatoxin production. The 9-deoxyxanthone gave dramatically enhanced levels of the mycotoxin. The 9-hydroxyxanthone, on the other hand, afforded no detectable increase in aflatoxins above controls, indicating that reductive deoxygenation at C-9 of a xanthone precursor does not take place in aflatoxin biosynthesis. Constraints imposed by earlier studies and the experiments in this paper serve to eliminate simple and intuitive conversions of versicolorin A to demethylsterigmatocystin and lead inescapably to a more subtle reaction sequence of oxidation-reduction-oxidation. Previous puzzling observations of extensive A-ring hydrogen exchange in the course of the rearrangement of versicolorin A to demethylsterigmatocystin have now been explained by a new mechanism that is consistent with all extant data. We propose that P450-mediated aryl epoxidation (AflN) initially disrupts the aromatic A-ring of versicolorin A. Oxirane opening enables A-ring proton exchange, as does the subsequent AflM-mediated reductive step. A second cycle of P450 oxidation (AflN), this time a Baeyer-Villiger cleavage, enables decarboxylation and the formation of demethylsterigmatocystin. Mechanistic and stereoelectronic principles that underlie this proposal are described and may prove general as illustrated in biogenetic hypotheses for four other fungal anthraquinone --> xanthone transformations.     

Effects of alkali metal halide salts on the hydrogen bond network of liquid water

Measurements of the oxygen K-edge X-ray absorption spectrum (XAS) of aqueous sodium halide solutions demonstrate that ions significantly perturb the electronic structure of adjacent water molecules. The addition of halide salts to water engenders an increase in the preedge intensity and a decrease in the postedge intensity of the XAS, analogous to those observed when increasing the temperature of pure water. The main-edge feature exhibits unique behavior and becomes more intense when salt is added. Density functional theory calculations of the XAS indicate that the observed red shift of the water transitions as a function of salt concentration arises from a strong, direct perturbation of the unoccupied molecular orbitals on water by anions, and does not require significant distortion of the hydrogen bond network beyond the first solvation shell. This contrasts the temperature-dependent spectral variations, which result primarily from intensity changes of specific transitions due to geometric rearrangement of the hydrogen bond network.     

Simulation of a Combined Isomerization Reactor & Pressure Swing Adsorption Unit

The Total Isomerization Process developed by Union Carbide in 1970 (Gary, 1987) for the conversion of normal paraffin's to their isomers consists of a reactor followed by a PSA unit each operating at similar pressures and temperatures. The combination of these two operations in one unit in a Pressure Swing Adsorption Reactor (PSAR) process may provide an increased throughput and a significant cost saving in ancillary equipment.The simulation of a mathematical model linking the catalyst packed-bed and the adsorbent packed-bed is reported. The catalyst is a Pd/Y-zeolite and the adsorbent is 5A zeolite. The simulated feed consists of 17% each of n- and isopentane with the remainder being hydrogen. The mathematical model assumes dispersed plug-flow in both sections, constant velocity in the reactor section but varying in the adsorber, with mass transfer in the adsorber section due to external fluid film resistance and macropore diffusion in series. The fraction of the total column length occupied by the catalyst (denoted by ) is accounted for in the model by solving numerically using orthogonal collocation on finite elements. Parameters varied are the ratio of catalyst/column length (), temperature range (506–533 K), high pressure (15–20 bars), with the low pressure held constant at 2 bars. The catalyst/column ratio has a strong effect at low temperatures. The optimum catalyst/column length ratio appears to be controlled by the low pressure step and occurs at = 0.7 for the assumptions used in this work.