2,6‐Bis(1‐benzyl‐1H‐1,2,3‐triazol‐4‐yl)pyridine and its octahedral copper complex

In the tridentate ligand 2,6‐bis(1‐benzyl‐1H‐1,2,3‐triazol‐4‐yl)pyridine, C₂₃H₁₉N₇, both sets of triazole N atoms are anti with respect to the pyridine N atom, while in the copper complex aqua[2,6‐bis(1‐benzyl‐1H‐1,2,3‐triazol‐4‐yl)pyridine](pyridine)(tetrafluoroborato)copper(II) tetrafluoroborate, [Cu(BF₄)(C₅H₅N)(C₂₃H₁₉N₇)(H₂O)]BF₄, the triazole N atoms are in the syn–syn conformation. The coordination of the Cu^II atom is distorted octahedral. The ligand structure is stabilized through intermolecular C—H...N interactions, while the crystal structure of the Cu complex is stabilized through water‐ and BF₄‐mediated hydrogen bonds. Photoluminiscence studies of the ligand and complex show that the ligand is fluorescent due to triazole–pyridine conjugation, but that the fluorescence is quenched on complexation.     

Transition metal complexes with thio­semicarbazide‐based ligands. XV. A square‐pyramidal NiII complex with an asymmetric coordination of 2,6‐di­acetyl­pyridine bis(S‐methyl­iso­thio­semicarbazone)

The title compound, [di­acetyl­pyridine bis(S‐methyl­iso­thio­semicarbazonato)]­iodo­nickel(II), [Ni(C₁₃H₁₈N₇S₂)I], is the first example of a complex involving the ²N coordination of the iso­thio­semicarbazide moiety. 2,6‐Di­acetyl­pyridine bis(S‐methyl­iso­thio­semicarbazone), as a potentially pentadentate ligand (N₅), is coordinated as a tetradentate species, whereby one (deprotonated) iso­thio­semicarbazide moiety is coordinated in the usual way (¹N⁴N), but the other (neutral) is bonded via the ²N atom only, the fourth ligator being the pyridine nitro­gen. The difference in coordination mode of the iso­thio­semicarbazide moiety is reflected in the ¹N—²N bond lengths of 1.359 (4) and 1.379 (3) Å in the deprotonated and undeprotonated moieties, respectively. The structure contains three fused chelate rings in a 5:5:6 arrangement. The six‐membered ring has a non‐planar conformation.     

A square‐planar NiII complex with an asymmetric coordination of a novel polynucleative 2,6‐diacetylpyridine bis{[2‐(hydroxyimino)propanoyl]hydrazone} ligand

The title compound, (2,6‐diacetylpyridine bis{[2‐(hydroxyimino)propanoyl]hydrazone}(2−))nickel(II) dimethyl sulfoxide solvate monohydrate, [Ni(C₁₅H₁₇N₇O₄)]·C₂H₆OS·H₂O, represents the first example of square‐planar N₄ coordination via N atoms with four different functions, namely amide, azomethine, hydroxyimino and pyridine. The coordination polyhedron of the central Ni atom has a slightly distorted square‐planar geometry. The 2,6‐diacetylpyridine bis{[2‐(hydroxyimino)propanoyl]hydrazone} ligand forms one six‐ and two five‐membered chelate rings, and a pseudo‐chelate ring through an intramolecular hydrogen bond with an amide group as donor and a deprotonated hydroxyimino group as acceptor, resulting in a pseudomacrocyclic arrangement.     

2,6‐Bis(azaindole)pyridine: reactivity with iron(III) and copper(II) salts

1‐[6‐(1H‐Pyrrolo[2,3‐b]pyridin‐1‐yl)pyridin‐2‐yl]‐1H‐pyrrolo[2,3‐b]pyridin‐7‐ium tetrachloridoferrate(III), (C₁₉H₁₄N₅)[FeCl₄], (II), and [2,6‐bis(1H‐pyrrolo[2,3‐b]pyridin‐1‐yl‐κN⁷)pyridine‐κN]bis(nitrato‐κO)copper(II), [Cu(NO₃)₂(C₁₉H₁₃N₅)], (III), were prepared by self‐assembly from FeCl₃·6H₂O or Cu(NO₃)₂·3H₂O and 2,6‐bis(1H‐pyrrolo[2,3‐b]pyridin‐1‐yl)pyridine [commonly called 2,6‐bis(azaindole)pyridine, bap], C₁₉H₁₃N₅, (I). Compound (I) crystallizes with Z′ = 2 in the P space group, with both independent molecules adopting a trans–trans conformation. Compound (II) is a salt complex with weak C—H...Cl interactions giving rise to a zigzag network with π‐stacking down the a axis. Complex (III) lies across a twofold rotation axis in the C2/c space group. The Cu^II center in (III) has an N₃O₂ trigonal–bipyramidal environment. The nitrate ligand coordinates in a monodentate fashion, while the bap ligand adopts a twisted tridentate binding mode. C—H...O interactions give rise to a ribbon motif.     

Two ZnII mononuclear coordination compounds with pyridinedicarboxylate and auxiliary N‐(pyridin‐4‐ylmethylidene)hydroxylamine ligands

Two new mononuclear coordination compounds, bis{4‐[(hydroxyimino)methyl]pyridinium} diaquabis(pyridine‐2,5‐dicarboxylato‐κ²N,O²)zincate(II), (C₆H₇N₂O)₂[Zn(C₇H₃NO₄)₂(H₂O)₂], (1), and (pyridine‐2,6‐dicarboxylato‐κ³O²,N,O⁶)bis[N‐(pyridin‐4‐ylmethylidene‐κN)hydroxylamine]zinc(II), [Zn(C₇H₃NO₄)(C₆H₆N₂O)₂], (2), have been synthesized and characterized by single‐crystal X‐ray diffractometry. The centrosymmetric Zn^II cation in (1) is octahedrally coordinated by two chelating pyridine‐2,5‐dicarboxylate ligands and by two water molecules in a distorted octahedral geometry. In (2), the Zn^II cation is coordinated by a tridentate pyridine‐2,6‐dicarboxylate dianion and by two N‐(pyridin‐4‐ylmethylidene)hydroxylamine molecules in a distorted C₂‐symmetric trigonal bipyramidal coordination geometry.     

catena‐Poly[[[diaquazinc]‐bis{μ‐N2,N6‐bis[(pyridin‐3‐yl)methyl]pyridine‐2,6‐dicarboxamide}] dinitrate]

In the title compound, {[Zn(C₁₉H₁₇N₅O₂)₂(H₂O)₂](NO₃)₂}_n, the Zn^II cation is located at an inversion centre within a slightly distorted octahedron, ligated by four N atoms from four N²,N⁶‐bis[(pyridin‐3‐yl)methyl]pyridine‐2,6‐dicarboxamide (L) ligands occupying a plane about the Zn^II atom with the two water O atoms perpendicular to that. In the complex molecule, the bidentate bridging L ligands display helical R and S conformers, and link the Zn^II cations into a one‐dimensional centrosymmetric double‐chain structure containing 32‐membered rings. The nitrate anions reside in these rings and are involved in multiple N—H...O hydrogen‐bond interactions. On excitation at 390 nm, the title compound displays a strong blue emission centred at 449 nm. Investigation of the thermal stability shows that the network structure is stable up to 420 K.     

Poly[[bis{μ2‐N2,N6‐bis[(pyridin‐3‐yl)methyl]pyridine‐2,6‐dicarboxamide}dichloridonickel(II)] N,N‐dimethylformamide tetrasolvate]

In the title compound, {[NiCl₂(C₁₉H₁₇N₅O₂)₂]·4C₃H₇NO}_n, the Ni^II atom is located on an inversion centre and is in a six‐coordinated octahedral geometry, formed by four pyridine N atoms from four N²,N⁶‐bis[(pyridin‐3‐yl)methyl]pyridine‐2,6‐dicarboxamide (BPDA) ligands occupying the equatorial plane and two chloride anions at the axial sites. The bidentate bridging BPDA ligands link the Ni^II atoms into a two‐dimensional corrugated grid‐like flexible layer with a (4,4)‐connected topology, which consists of left‐ and right‐handed helical chains sharing the common Ni^II atoms. Investigation of the thermal stability shows that the network is stable up to 573 K.     

Two hydrates of 2,6‐bis­(1H‐benzimidazol‐2‐yl)­pyridine

The structures of the mono‐ and sesquihydrates of 2,6‐bis(1H‐benz­imi­da­zol‐2‐yl)­pyridine (bbip) are reported. Phase (I), C₁₉H₁₃N₅·H₂O, has one water and one bbip mol­ecule in the asymmetric unit, while phase (II), C₁₉H₁₃N₅·1.5H₂O, has three water mol­ecules and two bbip mol­ecules in the asymmetric unit. The compounds exhibit very similar molecular geom­etries but different packing organizations, which result from intricate hydrogen‐bonding schemes.     

Synthesis,characterization, and crystal structures of organonickel(II) complexes coordinated to novel 1‐bromo‐2,6‐bis{[(λ5‐phosphanylidene)imino]methyl}benzene NCN‐pincer ligands

A novel family of four 1‐bromo‐2,6‐bis{[(λ⁵‐phosphanylidene)imino]methyl}benzene ligands has been synthesized and characterized. The phosphiniminomethyl substituents are decorated with either three phenyl groups, two phenyl and one cyclohexyl group, one phenyl and two cyclohexyl groups, or three cyclohexyl groups. Each ligand was metallated using zero‐valent nickel through an oxidative addition to form a family of organonickel(II) complexes, namely (2,6‐bis{[(triphenyl‐λ⁵‐phosphanylidene)imino]methyl}phenyl‐κ³N,C¹,N′)bromidonickel(II) dichloromethane hemisolvate, [NiBr(C₄₄H₃₇N₂P₂)]·0.5CH₂Cl₂, (2,6‐bis{[(cyclohexyldiphenyl‐λ⁵‐phosphanylidene)imino]methyl}phenyl‐κ³N,C¹,N′)bromidonickel(II) diethyl ether hemisolvate, [NiBr(C₄₄H₄₉N₂P₂)]·0.5C₄H₁₀O, (2,6‐bis{[(dicyclohexylphenyl‐λ⁵‐phosphanylidene)imino]methyl}phenyl‐κ³N,C¹,N′)bromidonickel(II), [NiBr(C₄₄H₆₁N₂P₂)], and (2,6‐bis{[(tricyclohexyl‐λ⁵‐phosphanylidene)imino]methyl}phenyl‐κ³N,C¹,N′)bromidonickel(II), [NiBr(C₄₄H₇₃N₂P₂)]. This family of complexes represents a useful opportunity to investigate the impact of incrementally changing the steric characteristics of a complex on its structure and reactivity.     

Supramolecular structures of bis‐thionooxalamic acid esters derived from (±)‐cyclohexane‐1,2‐diamine and (±)‐1,2‐diphenylethylenediamine

The bis‐thionooxalamic acid esters trans‐(±)‐diethyl N,N′‐(cyclohexane‐1,2‐diyl)bis(2‐thiooxamate), C₁₄H₂₂N₂O₄S₂, and (±)‐N,N′‐diethyl (1,2‐diphenylethane‐1,2‐diyl)bis(2‐thiooxamate), C₂₂H₂₄N₂O₄S₂, both consist of conformationally flexible molecules which adopt similar conformations with approximate C₂ rotational symmetry. The thioamide and ester parts of the thiooxamate group are significantly twisted along the central C—C bond, with the S=C—C=O torsion angles in the range 30.94 (19)–44.77 (19)°. The twisted s‐cis conformation of the thionooxamide groups facilitates assembly of molecules into a one‐dimensional polymeric structure via intermolecular three‐center C=S...NH...O=C hydrogen bonds and C—H...O interactions formed between molecules of the opposite chirality.     

Four bis(1‐chloro‐2,2,4,4‐tetramethyl‐3‐oxocyclobutan‐1‐yl)oligosulfanes

The four oligosulfanes, bis(1‐chloro‐2,2,4,4‐tetra­methyl‐3‐oxo­cyclo­butan‐1‐yl)­disulfane, C₁₆H₂₄Cl₂O₂S₂, (III), 1,3‐bis(1‐chloro‐2,2,4,4‐tetra­methyl‐3‐oxo­cyclo­butan‐1‐yl)­trisulfane, C₁₆H₂₄Cl₂O₂S₃, (V), 1,4‐bis(1‐chloro‐2,2,4,4‐tetra­methyl‐3‐oxo­cyclo­butan‐1‐yl)­tetrasulfane, C₁₆H₂₄Cl₂O₂S₄, (VII), and 1,6‐bis(1‐chloro‐2,2,4,4‐tetra­methyl‐3‐oxo­cyclo­butan‐1‐yl)­hexasul­fane, C₁₆H₂₄Cl₂O₂S₆, (VIII), all have similar geometric parameters, with the C—C bond lengths involving the chloro‐substituted cyclo­butanyl C atom being elongated to about 1.59 Å. There are two mol­ecules in the asymmetric units of the tri‐ and tetrasulfanes, and the mol­ecules in the latter compound have local C₂ symmetry. The mol­ecule of the hexasulfane has crystallographic C₂ symmetry. Most of the cyclo­butanyl rings are not perfectly planar and have slight but varying degrees of distortion towards a flattened tetrahedron. The polysulfane chain in each structure has a helical conformation, with each additional S atom in the chain adding approximately one quarter of a turn to the helix.     

Two N‐substituted 3,5‐diphenyl‐2‐pyrazoline‐1‐thiocarboxamides

The structures of N‐ethyl‐3‐(4‐fluoro­phen­yl)‐5‐(4‐methoxy­phen­yl)‐2‐pyrazoline‐1‐thio­carboxamide, C₁₉H₂₀FN₃OS, (I), and 3‐(4‐fluoro­phen­yl)‐N‐methyl‐5‐(4‐methyl­phen­yl)‐2‐pyrazoline‐1‐thio­carboxamide, C₁₈H₁₈FN₃S, (II), have similar geometric parameters. The meth­oxy/methyl‐substituted phenyl groups are almost perpendicular to the pyrazoline (pyraz) ring [inter­planar angles of 89.29 (8) and 80.39 (10)° for (I) and (II), respectively], which is coplanar with the fluoro­phenyl ring [inter­planar angles of 5.72 (9) and 10.48 (10)°]. The pyrazoline ring approximates an envelope conformation in both structures, with the two‐coordinate N atom involved in an intra­molecular N—H⋯N_pyraz inter­action. In (I), N—H⋯O and C—H⋯S inter­molecular hydrogen bonds are the primary inter­actions, whereas in (II), there are no intermolecular hydrogen bonds.     

The inner‐salt zwitterion,the dihydrochloride dihydrate and the dimethyl sulfoxide disolvate of 3,6‐bis(pyridin‐2‐yl)pyrazine‐2,5‐dicarboxylic acid

In the inner‐salt zwitterion of 3,6‐bis(pyridin‐2‐yl)pyrazine‐2,5‐dicarboxylic acid, (I), namely 5‐carboxy‐3‐(pyridin‐1‐ium‐2‐yl)‐6‐(pyridin‐2‐yl)pyrazine‐2‐carboxylate, [C₁₆H₁₀N₄O₄, (Ia)], the pyrazine ring has a twist–boat conformation. The opposing pyridine and pyridinium rings are almost perpendicular to one another, with a dihedral angle of 80.24 (18)°, and are inclined to the pyrazine mean plane by 36.83 (17) and 43.74 (17)°, respectively. The carboxy and carboxylate groups are inclined to the mean plane of the pyrazine ring by 43.60 (17) and 45.46 (17)°, respectively. In the crystal structure, the molecules are linked via N—H...O and O—H...O hydrogen bonds, leading to the formation of double‐stranded chains propagating in the [010] direction. On treating (Ia) with aqueous 1 M HCl, the diprotonated dihydrate form 2,2′‐(3,6‐dicarboxypyrazine‐2,5‐diyl)bis(pyridin‐1‐ium) dichloride dihydrate [C₁₆H₁₂N₄O₄²⁺·2Cl⁻·2H₂O, (Ib)] was obtained. The cation lies about an inversion centre. The pyridinium rings and carboxy groups are inclined to the planar pyrazine ring by 55.53 (9) and 19.8 (2)°, respectively. In the crystal structure, the molecules are involved in N—H...Cl, O—H...O_water and O_water—H...Cl hydrogen bonds, leading to the formation of chains propagating in the [010] direction. When (Ia) was recrystallized from dimethyl sulfoxide (DMSO), the DMSO disolvate 3,6‐bis(pyridin‐2‐yl)pyrazine‐2,5‐dicarboxylic acid dimethyl sulfoxide disolvate [C₁₆H₁₀N₄O₄·2C₂H₆OS, (Ic)] of (I) was obtained. Here, the molecule of (I) lies about an inversion centre and the pyridine rings are inclined to the planar pyrazine ring by only 23.59 (12)°. However, the carboxy groups are inclined to the pyrazine ring by 69.0 (3)°. In the crystal structure, the carboxy groups are linked to the DMSO molecules by O—H...O hydrogen bonds. In all three crystal structures, the presence of nonclassical hydrogen bonds gives rise to the formation of three‐dimensional supramolecular architectures.     

[2,6‐Bis(1H‐benzimidazol‐2‐yl‐κN3)­pyridine‐κN](di­methyl­form­amide‐κO)­(thio­sulfato‐κ2O,S)­nickel(II) mono­hydrate

The structure of the title compound, [Ni(ths)(bbip)(dmf)]·­H₂O [ths is thio­sulfate, S₂O₃; bbip is 2,6‐bis(1H‐benz­imidazol‐2‐yl)­pyridine, C₂₁H₁₃N₅; and dmf is di­methyl­form­amide, C₃H₇NO], is monomeric, with the nickel ion octahe­drally surrounded by an N,N′,N′′‐tridentate bbip mol­ecule, an S,O‐bidentate ths mol­ecule and an O‐monodentate dmf mol­ecule. The H atoms of the hydration water mol­ecule and the amino groups of bbip are involved in hydrogen bonding and determine a spatial organization of broad layers parallel to (001), which are connected by weak interactions.     

Folded conformations due to arene interactions in dissymmetric and symmetric butylidene‐linker models based on pyrazolo[3,4‐d]pyrimidine,purine and 7‐deazapurine

The butylidene‐linker models 1‐[2‐(2,6‐dimethylsulfanyl‐9H‐purin‐9‐yl)‐2‐methylidenepropyl]‐4,6‐bis(methylsulfanyl)‐1H‐pyrazolo[3,4‐d]pyrimidine, C₁₈H₂₀N₈S₄, (XI), 7,7′‐(2‐methylidenepropane‐1,3‐diyl)bis[3‐methyl‐2‐methylsulfanyl‐3H‐pyrrolo[2,3‐d]pyrimidin‐4(7H)‐one], C₂₀H₂₂N₆O₂S₂, (XIV), and 7‐[2‐(4,6‐dimethylsulfanyl‐1H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl)‐2‐methylidenepropyl]‐3‐methyl‐2‐methylsulfanyl‐3H‐pyrrolo[2,3‐d]pyrimidin‐4(7H)‐one, C₁₉H₂₁N₇OS₃, (XV), show folded conformations in solution, as shown by ¹H NMR analysis. This folding carries over to the crystalline state. Intramolecular π–π interactions are observed in all three compounds, but only (XIV) shows additional intramolecular C—H...π interactions in the solid state. As far as can be established, this is the first report incorporating the pyrrolo[2,3‐d]pyrimidine nucleus for such a study. In addition to the π–π interactions, the crystal structures are also stabilized by other weak intermolecular C—H...S/N/O and/or S...N/S interactions.     

1,2‐Bis(8‐quinolyl­thio­methyl)­benzene

The title potentially tetradentate N,S,S,N‐donor ligand, C₂₆H₂₀N₂S₂, has been structurally characterized. The two S atoms adopt a trans conformation, lying above and below the benzene ring. The two quinoline rings are planar, with one parallel to the benzene ring and the other nearly perpendicular to it.     

A host–guest complex of di­aqua­bis­[1‐hydroxy‐2(1H)‐pyridine­thionato‐O,S]­magnesium(II) and 2,2′‐di­thio­bis­(pyridine N‐oxide)

The title compound, [Mg(C₅H₄NOS)₂(H₂O)₂]·C₁₀H₈N₂O₂S₂, is a two‐component host–guest material. The 2,2′‐di­thio­bis(pyridine N‐oxide) molecule has crystallographic twofold symmetry. The metal complex lies on an inversion centre and associates via C—H?S interactions into chains which thread the 2,2′‐di­thio­bis­(pyridine N‐oxide) lattice in perpendicular directions. Hydro­gen bonds exist between the water mol­ecules of the di­aqua­magnesium units and the N—O groups of the host lattice.     

The crystal structure,luminescence and nitrobenzene‐sensing properties of a two‐dimensional MnII coordination polymer based on 2,6‐bis(imidazol‐1‐yl)pyridine

A two‐dimensional Mn^II coordination polymer (CP), poly[bis[μ₂‐2,6‐bis(imidazol‐1‐yl)pyridine‐κ²N³:N^3′]bis(thiocyanato‐κN)manganese] [Mn(NCS)₂(C₁₁H₉N₅)₂]_n, (I), has been obtained by the self‐assembly reaction of Mn(ClO₄)₂·6H₂O, NH₄SCN and bent 2,6‐bis(imidazol‐1‐yl)pyridine (2,6‐bip). CP (I) was characterized by FT–IR spectroscopy, elemental analysis and single‐crystal X‐ray diffraction. The crystal structure features a unique two‐dimensional (4,4) network with one‐dimensional channels. The luminescence and nitrobenzene‐sensing properties were explored in a DMF suspension, revealing that CP (I) shows a strong luminescence emission and is highly sensitive for nitrobenzene detection.     

Rare examples of base pairing via a protonated pyridine N atom in two salts of N2,N6‐bis(1,3‐dimethylimidazolin‐2‐ylidene)pyridine‐2,6‐diamine

The title compounds, namely 2,6‐bis[(1,3‐dimethylimidazolin‐2‐ylidene)amino]pyridinium perchlorate, C₁₅H₂₄N₇⁺·ClO₄⁻, (I), and bis{2,6‐bis[(1,3‐dimethylimidazolin‐2‐ylidene)amino]pyridinium} μ‐oxido‐bis[trichloridoiron(III)], (C₁₅H₂₄N₇)₂[Fe₂Cl₆O], (II), are structurally unusual examples of the organization of molecular units via base pairing. The cations in salts (I) and (II) are derived from the bisguanidine N²,N⁶‐bis(1,3‐dimethylimidazolin‐2‐ylidene)pyridine‐2,6‐diamine, which associates in centrosymmetric pairs via two N—H...N hydrogen‐bond interactions. N—H...N bridges are formed between the protonated pyridine N atom and one of the nonprotonated guanidine N atoms, with N...H distances of 2.01 (1)–2.10 (1) Å. Compound (I) contains two crystallographically independent cations and anions per asymmetric unit. One of the perchlorate anions is disordered, while the [Fe₂Cl₆O]²⁻ anion lies on an inversion centre.     

3‐Methyl 5‐isopropyl 2‐methoxy­imino­methyl‐6‐methyl‐4‐(3‐nitro­phenyl)‐1,4‐di­hydro­pyridine‐3,5‐di­carboxyl­ate

The crystal structure of the title compound, C₂₀H₂₃N₃O₇, consists of relatively isolated mol­ecules. The substituted 1,4‐di­hydro­pyridine ring adopts a flattened boat conformation. Both ester groups, at positions 3 and 5, have cis,cis geometry. The phenyl ring is nearly planar and is approximately perpendicular to the 1,4‐di­hydro­pyridine ring (dihedral angle 87.70°).