改进的分子连接性方法

通过用Mulliken键级来加权分子连接性指数中的点价,使分子轨道理论与分子连接性指数有机地结合起来,将分子连接性指数改进成为一种量子拓扑指数。对比发现,分子连接性指数的点价与Mulliken键级具有相近的物理意义,而Mulliken键级更具有独特的优越性。利用改进的分子连接性指数对几种具有代表性的烃类与其体积、疏水常数以及热力学性质进行了关联,得到了满意的结果。     

N1位取代的喹诺酮类化合物分子设计与合成研究

在抗感染化疗药物研究领域中,喹诺酮类抗菌药由于有许多优良特性,近年来得到迅速发展。喹诺酮类的基本骨架如图1。而1位取代基的演变实际是喹诺酮类化合活性改进的写照。N1位早期研究表明以乙基及与其体积相似的乙烯基为最佳,大于或小于乙烯基均使活性降低。本文通过对15个N1位取代的该类化合物的抗菌活性进行定量构效关系研究,得到4个QSAR关系式,并对所设计的新化合物进行活性预测、合成、抗菌活性测定。结果表明,新化合物具有良好活性,且实验值与预测值基本相符。     

对氨基苯甲酸酯同系物与细胞色素P450代谢中间体络合物形成速率的定量构效关系

对氨基苯甲酸酯同系物与细胞色素Ｐ４５０代谢中间体络合物形成速率的定量构效关系傅旭春,刘志强,蒋惠娣（浙江医科大学药学系,杭州,３１０００６）关键词细胞色素Ｐ４５０,对氨基苯甲酸酯,代谢中间体络合物,定量构效关系,分子连接性细胞色素Ｐ４５０是混合功能氧...     

Relationship between the Biodegradability and Structure of Polycyclic Aromatic Hydrocarbons

21 Physicochemical and quantum chemical parameters of 17 kinds of polycyclic aromatic hydrocarbons were calculated by using semi-empirical MOPAC AM1 method. By means of Partial Least Squares （PLS）, quantitative structure-biodegradation relationship （QSBR） study was performed with the logarithm of specific biodegradation rates （logKb）. The optimal model was obtained, and the result showed that the first-order molecular connectivity index （^1X）, the energy of the lowest unoccupied molecular orbital （Elumo）, logarithm of n-octyl alcohol/water partition coefficient （logP） and torsion energy （Et） are the dominant factors governing the biodegradability of polyeyelie aromatic hydrocarbons, and the effect of second-order valence molecular connectivity index （^2X^V）, the third-order valence molecular connectivity index （^3X^V） and molar refractivity （Rm） should not be ignored.     

应用基团键贡献法计算烷烃和环烷烃的折光指数

根据分子中基团的特性和连接性,发展了一种直接根据分子结构信息计算烷烃和环烷烃折光指数的新方法－基团键贡献法,该方法既考虑分子中基团的特性,又考虑基团之间的连接性(化学键),同时具有基团贡献法和化学键贡献法的特点。应用基团键贡献法对950种烷烃和环烷烃折光指数的计算结果表明,计算值与实验值的一致性令人满意,平均误差0.11%,进一步对聚乙烯、聚丙烯和聚1-丁烯等聚合物的折光指数进行预测,也取得了令人满意的结果。     

Condensed Extended Hyper-Wiener Index

According to the definitions of molecular connectivity and hyper-Wiener index, a novel set of hyper-Wiener indexes （Dn, ^mDn） were defined and named as condensed extended hyper-Wiener index, the potential usefulness of which in QSAR/QSPR is evaluated by its correlation with a number of C3-C8 alkanes as well as by a favorable comparison with models based on molecular connectivity index and overall Wiener index.     

气相色谱法测定多溴联苯的蒸气压

采用气相色谱法,以二氯二苯三氯乙烷(DDT)为参考化合物,测定了6个多溴联苯(PBBs)在不同温度条件下的蒸气压, 然后使用Slide数理统计软件、以最小二乘法回归计算出Antoine方程的A,B,C参数,从而建立了6个PBBs的蒸气压与温度 的关联式。初步探讨了分子连接性指数与蒸气压的相关性,结果发现一阶拓扑指数与蒸气压表现出很好的线性关系,两者 的相关系数的平方大于0.99,标准偏差小于0.08。     

Integration of Graph Theory and Quantum Chemistry for Structure-Activity Relationships

Abstract

The objective of this article is to outline both graph-theoretically based and quantum chemically based structural indices of potential use in quantitative structure activity correlations. We consider graph-theoretical indices such as the connectivity index, topological index, Wiener index and molecular ID indices. Several structural and geometry-dependent indices can be derived from semiempirical and ab initio quantum calculations based on the charge densities, overlap matrices, frontier orbitals, molecular hardness, free valence, density matrices, quantum spectral difference indices, quantum spectral indices and bond matrices. Finally, the use of electrostatic potentials and charge densities for the prediction of reactive sites will be discussed.     

一种修正分子连接性指数杂原子点价的新方法

提出了一种对分子连接性指数中杂原子点价进行修正的新方法,新点价统一了碳原子与其它杂原子点价的定义公式,使杂原子的价点价与非价点价的定义具有了唯一性。对原点价的一些不足,尤其是在处理高氧化态原子时得到显著改进,且保持了碳原子与原定义的非价和价点价具有相同的数值,并继承了分子连接性指数原有的好的性质。新点价物理意义明确,具有与原子电负性相近的定义,其价与非价之差与原子的Mulliken电负性有很好的相关性,且在保持了与体积具有良好相关性的基础上,在处理原子的电性性能上明显改进,进一步明确了价与非价指数的概念,并提出了杂原子取代效应的概念。实际计算应用表明,新点价在处理杂原子,尤其是具有高氧化态和不同氧化态的原子上有明显的改进。     

链烷烃标准熵的拓扑研究

根据核磁共振的峰数及Randic的碳原子支化度,提出了碳原子特征值.基于连接矩阵和碳原子特征值,建立新的连接指数 mY.其中的0阶连接性指数 0Y很容易计算,且对烷烃异构体有很强的区分能力.将157种气态链烷烃的标准熵与其 0Y相关联, R=0.9985, 属于优级模型.与Randic指数的 0χ及倪才华等提出的信息拓扑指数Ix、 IW比较, 0Y具有良好的性质相关性与结构选择性.     

QSBR Study on the Anaerobic Biodegradation of Chlorophenols

1 INTRODUCTION Chlorophenols (CPs) have been widely applied in such industries[1] as wood preservative, antitrust, bactericide and herbicide since 1930s. Due to the existence of phenol ring structure and chloro-atom, chlorophenols have strong toxicity and high anti- degradation ability. Previous reports show that[2, 3] chlorophenols are difficult to oxidize under aerobic condition, whereas anaerobic biological treatment can effectively reduce the toxicity towards microor- ganism so as to …     

Complete graph conjecture for inner-core electrons: homogeneous index case

The complete graph conjecture that encodes the inner-core electrons of atoms with principal quantum number n >or= 2 with complete graphs, and especially with odd complete graphs, is discussed. This conjecture is used to derive new values for the molecular connectivity and pseudoconnectivity basis indices of hydrogen-suppressed chemical pseudographs. For atoms with n = 2 the new values derived with this conjecture are coincident with the old ones. The modeling ability of the new homogeneous basis indices, and of the higher-order terms, is tested and compared with previous modeling studies, which are centered on basis indices that are either based on quantum concepts or partially based on this new conjecture for the inner-core electrons. Two similar algorithms have been proposed with this conjecture, and they parallel the two "quantum" algorithms put forward by molecular connectivity for atoms with n > 2. Nine properties of five classes of compounds have been tested: the molecular polarizabilities of a class of organic compounds, the dipole moment, molar refraction, boiling points, ionization energies, and parachor of a series of halomethanes, the lattice enthalpy of metal halides, the rates of hydrogen abstraction of chlorofluorocarbons, and the pED(50) of phenylalkylamines. The two tested algorithms based on the odd complete graph conjecture give rise to a highly interesting model of the nine properties, and three of them can even be modeled by the same set of basis indices. Interesting is the role of some basis indices all along the model.     

Mass connectivity index,a new molecular parameter for the estimation of ionic liquid properties

A new concept named mass connectivity index (MCI) to encode bond contributions and to allow quantifying the extent of branching in a molecule, especially of ionic liquids, is proposed. The concept is based on the molecular connectivity concept first introduced by Randic in 1975 and modified in different forms by several authors. The proposed concept is much easier to calculate than any of the connectivity indexes available in the literature. Thus the only data required for determining the MCI are the groups forming the molecule and the mass of the groups. The groups forming the molecule are defined as commonly done in group contribution methods. The index is used as a variable in generalized correlations to accurately estimate the density and the heat capacity of ionic liquids.