Two-dimensional surface chirality control by solvent-induced helicity inversion of a helical polyacetylene on graphite

We report the direct evidence for the macromolecular helicity inversion of a helical poly(phenylacetylene) bearing l- or d-alanine pendants with a long alkyl chain in different solvents by atomic force microscopy observations of the diastereomeric helical structures. The diastereomeric helical poly(phenylacetylene)s induced in polar and nonpolar solvents self-assembled into ordered, two-dimensional helix bundles with controlled molecular packing, helical pitch, and handedness on graphite upon exposure of each solvent. The macromolecular helicity deposited on graphite from a polar solvent further inverted to the opposite handedness by exposure to a specific nonpolar solvent, and these changes in the surface chirality based on the inversion of helicity could be visualized by atomic force microscopy with molecular resolution, and the results were quantified by X-ray diffraction of the oriented liquid crystalline, diastereomeric helical polymer films.     

Meta-linked poly(phenylene ethynylene) conjugated polyelectrolyte featuring a chiral side group: helical folding and guest binding

A water soluble, meta-linked poly(phenylene ethynylene) featuring chiral and optically active side groups based on L-alanine (mPPE-Ala) has been studied by using absorption, fluorescence, and circular dichroism spectroscopy. Studies of mPPE-Ala in methanol/water solvent mixtures show that the polymer folds into a helical conformation, and the extent of helical folding increases with the volume % water in the solvent. The presence of the helical conformation is signaled by the appearance of a broad, excimer-like visible fluorescence band, combined with a strong bisignate circular dichroism signal in the region of the pi,pi absorption of the polymer backbone. The circular dichroism signal exhibits negative chirality, suggesting that the left-handed (M-form) of the helix is in enantiomeric excess. Binding of the metallointercalator [Ru(bpy)2(dppz)]2+ (where bpy = 2,2-bipyridine and dppz = dipyrido[3,2-a:2',3'-c]phenazine) with the helical polymer is accompanied by the appearance of the orange-red photoluminescence from the metal complex. This effect is directly analogous to that observed when [Ru(bpy)2(dppz)]2+ binds to DNA via intercalation, suggesting that the metal complex binds to mPPE-Ala by intercalating between the pi-stacked phenylene ethynylene residues. Cationic cyanine dyes also bind to the periphery of the helical polymer in a manner that is interpreted as "groove binding". A circular dichroism signal is observed that is believed to arise from exciton coupling within the chiral cyanine dye chromophore aggregate that is formed as the dye molecules are oriented by the helical mPPE-Ala "template".     

Poly(phenylacetylene)s bearing a peptide pendant: helical conformational changes of the polymer backbone stimulated by the pendant conformational change

Optically active, cis-transoid poly(phenylacetylene) derivatives bearing a poly(gamma-benzyl-L-glutamate) [poly(PBGAm)] or poly(L-glutamic acid) [poly(PGAm)] chain as the pendant were prepared by polymerisation of the corresponding macromonomer with a rhodium catalyst followed by hydrolysis of the pendant ester groups. Their conformational changes in solution, induced by a helix-coil transition of the pendant polypeptides, were investigated using circular dichroism (CD) and absorption spectroscopies. A series of macromonomers with a different peptide chain lengths was synthesised by the polymerisation of the N-carboxyanhydride of gamma-benzyl-L-glutamate with a phenylacetylene bearing an alanine residue as the initiator. The obtained macromonomers (PBGAm) were further polymerised with a rhodium catalyst in N,N-dimethylformamide (DMF) to yield novel poly(phenylacetylene)s [poly(PBGAm)] with a poly(gamma-benzyl-L-glutamate) pendant. The poly(PBGAm) exhibited an induced circular dichroism (ICD) in the UV/Vis region of the polymer backbone in dimethyl sulfoxide (DMSO), probably due to the prevailing one-handed helix formation. The Cotton effect signs of a DMSO solution of the poly(PBGAm) were inverted and accompanied by a visible colour change in the presence of an increasing amount of chloroform or DMF containing lithium chloride. The results suggest that poly(PBGAm) may undergo a conformational change such as a helix-helix transition with a different helical pitch responding to a change in the alpha-helix content of the poly(gamma-benzyl-L-glutamate) pendant. Moreover, a water-soluble poly(PGAm) also showed a similar, but dramatic change in its helical conformation with a visible colour change stimulated by a helix-coil transition of the pendant poly(L-glutamic acid) chains by changing the pH in water.     

Self-assembling of helical poly(phenylacetylene) carrying L-valine pendants in solution, on mica substrate, and on water surface

In the present work, we investigated self-assembling of a poly(phenylacetylene) carrying L-valine pendants (PPA-Val) in a water/methanol solution, upon evaporation of the solution on mica, and on the water surface. With intercalation of a fluorescence probe of Ru(phen)2(dppx)2+ (phen = 1,10-phenanthroline, dppx=7,8-dimethyldipyridophenazine) into the hydrophobic cavities associated by the PPA-Val chains, their helical structures were directly detected in solution with an in situ fluorescence microscope. Helical aggregates were observed with AFM upon evaporation of the solvents, suggesting that the helical structures in the solution are the building blocks of the helical aggregates. Self-assembling structures of PPA-Val on the water surface were, however, very different from that formed upon evaporation of its THF solution on the mica surface. The polymer chains associated into a monolayer of extended fibers on the water surface, whereas superhelical fibers formed on the mica surface. Water molecules play a critical role in inducing the polymer to form diverse morphological structures in its bulk solution and on its surface. In solution, the isotropic hydrophobic effect drove the polymer chains to form superhelical aggregates, while on the water surface, the hydrophobic effect concentrated mainly on the lateral part of the polymer, thus giving a monolayer of extended fibers.     

Macromolecular helicity inversion of an optically active helical poly(phenylacetylene) by chemical modification of the side groups

An optically active helical poly(phenylacetylene) was synthesized by the copolymerization of phenylacetylenes bearing optically active hydroxy or ester groups obtained by the kinetic resolution of a racemic phenylacetylene with lipase; the helix-sense was inverted from one helix to another by the further chemical modification of the hydroxy groups with achiral bulky isocyanates or an acid chloride.     

A helical array of pendant fullerenes on a helical poly(phenylacetylene) induced by non-covalent chiral interactions

Novel [60]fullerene-based poly(phenylacetylene)s prepared by the copolymerization of achiral phenylacetylenes bearing a C(60) or crown ether pendant form a one-handed helix upon complexation with L- and D-alanine, yielding a helical array of the pendant fullerenes with a predominant screw-sense along the polymer backbone.     

Chirality sensing of chiral pyrrolidines and piperazines with a liquid crystalline dynamic helical poly(phenylacetylene) bearing ethyl phosphonate pendant groups

Stereoregular cis‐transoidal poly(phenylacetylene) bearing a phosphonic acid monoethyl ester as the pendant group (poly‐ 1 ‐H) was found to form a preferred‐handed helix upon complexation with various optically active pyrrolidines and piperazines in dilute dimethyl sulfoxide and water, and the complexes exhibited characteristic induced circular dichroisms (ICDs) in the UV‐vis region of the polymer backbone. The Cotton effect signs in water reflect the absolute configuration of the pyrrolidines. The sodium salt of poly‐ 1 ‐H (poly‐ 1 ‐Na) and poly‐ 1 ‐H in the presence of optically active amines formed lyotropic nematic and cholesteric liquid crystalline phases in concentrated water solutions, respectively, indicating the rigid‐rod characteristic of the polymer main chain regardless of the lack of a single‐handed helix, as evidenced by the long persistence length of about 18 nm before and after the preferred‐handed helicity induction in the polymer. X‐ray diffraction of the oriented films of the nematic and cholesteric liquid crystalline polymers exhibited almost the same diffraction pattern, suggesting that both polymers have the same helical structure; dynamically racemic and one‐handed helices, respectively. On the basis of the X‐ray analysis, a possible helical structure of poly‐ 1 is proposed. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 1383–1390, 2010     

Reversible assembly of enantiomeric helical polymers: from fibers to gels

A novel class of stereocomplexes is described by the interaction of helically complementary poly(phenylacetylene)s (PPAs) carrying an α-methoxy-α-trifluoromethylphenylacetamide pendant group. The formation of the stereocomplex requires the presence of cis amide bonds on the external crest of the polymer to provide efficient cooperative supramolecular hydrogen bonding between matching enantiomeric helical structures. The interlocking of the chains gives rise to supramolecular fiber-like aggregates that, at higher concentrations, result in gels. The modification of the cis–trans amide conformation at the pendant groups allows the controlled formation and cleavage of the stereocomplex due to a dramatic change between the intermolecular and intramolecular hydrogen bond interactions.     

Detection and amplification of chirality by helical polymers

A unique feature of synthetic helical polymers for the detection and amplification of chirality is briefly described in this article. In sharp contrast to host-guest and supramolecular systems that use small synthetic receptor molecules, chirality can be significantly amplified in a helical polymer, such as poly(phenylacetylene)s with functional pendants, which enable the detection of a tiny imbalance in biologically important chiral molecules through a noncovalent bonding interaction with high cooperativity. The rational design of polymeric receptors can be possible by using chromophoric helical polymers combined with functional groups as the pendants, which target particular chiral guest molecules for developing a highly efficient chirality-sensing system. The chirality sensing of other small molecular and supramolecular systems is also briefly described for comparison.     

Dynamic Axial-to-Helical Communication Mechanism in Poly[(allenylethynylenephenylene)acetylene]s under External Stimuli

Helix inversion in chiral dynamic helical polymers is usually achieved by conformational changes at the pendant groups induced through external stimuli. Herein, a different mechanism of helix inversion in poly(phenylacetylene)s (PPAs) is presented, based on the activation/deactivation of supramolecular interactions. We prepared poly[(allenylethynylenephenylene)acetylene]s (PAEPAs) in which the pendant groups are conformationally locked chiral allenes. Therefore, their substituents are placed in specific spatial orientations. As a result, the screw sense of a PAEPA is fixed by the allenyl substituent with the optimal size/distance relationship to the backbone. This helical sense command can be surpassed by supramolecular interactions between another substituent on the allene and appropriate external stimuli, such as amines. So, a helix inversion occurs through a novel axial-to-helical communication mechanism, opening a new scenario for taming the helices of chiral dynamic helical polymers.     

Substituent effects on the assembly of helical cyanine dye aggregates in the minor groove of a DNA template

Double-helical DNA was used as a template for the assembly of helical cyanine dye aggregates. The aggregates consist of cofacial dimers aligned end-to-end in the minor groove of the DNA. The effect of methoxy or fluoro substituents placed on the periphery of the cyanine dye heterocycles on aggregation both in water and on the DNA template was studied by UV-vis and circular dichroism spectroscopy. Methoxy groups were found to be stronger promoters of aggregation than fluoro, and a dimethoxy dye exhibited a higher propensity to aggregate compared with an unsymmetrical methoxy/fluoro dye. Semiempirical calculations supported the experimental observation of methoxy substitution favoring aggregation. These results indicate that dispersion and hydrophobic effects contribute more to dimerization/aggregation than do electron donor-acceptor effects.     

Supramolecular device for artificial photosynthetic mimics as helix-mediated antenna/reaction center ensemble

We have developed a novel integrated supramolecular device for a photosynthetic antenna/reaction center (RC) model based on a helical amylose, which plays an important role as the host for cyanine dye J-aggregation onto the helical surface and also for inclusion of a D-A chain chromophore inside the helical cavity, where the J-aggregates function as an array of photoreceptor antenna that funnel excitation across the helix to the chromophore.     

Chirality sensing of various biomolecules with helical poly(phenylacetylene)s bearing acidic functional groups in water

Stereoregular, cis–transoidal poly(phenylacetylene)s bearing strongly acidic functional groups as pendants, such as a phosphonic acid and its monoethyl ester and a sulfonic acid, were found to interact with various biomolecules such as peptides, proteins, amino sugars, and carbohydrates in water, and the complexes exhibited characteristic induced circular dichroisms in the ultraviolet–visible region of the polymer backbones, which resulted from the formation of predominantly one-handed helical conformations. On the other hand, the sodium salt of poly[(4-carboxyphenyl)acetylene], bearing a weak acidic carboxy group, showed induced circular dichroisms only in the presence of carbohydrates and some positively charged proteins. The sensitivity of the polymers to the chirality of various biomolecules was also investigated with circular dichroism spectroscopy. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 5039–5048, 2006     

Detection and amplification of a small enantiomeric imbalance in alpha-amino acids by a helical poly(phenylacetylene) with crown ether pendants

We have designed a novel stereoregular poly(phenylacetylene) bearing the bulky crown ether as the pendant (poly-1) for the amino acid binding site. The polymer forms a one-handed helix upon complexation with l-amino acid perchlorates, and the complexes exhibit an induced circular dichroism (ICD) with the same Cotton effect signs in the polymer backbone region through a significant cooperative interaction. Poly-1 is highly sensitive to the amino acid chirality and can detect an extremely small enantiomeric imbalance in alpha-amino acids (less than 0.005% enantiomeric excess of alanine, for example).     

Synthesis,chiroptical properties of a helical polyacetylene derivative carrying urea moieties

A novel phenylacetylene derivative containing urea groups was synthesized and polymerized with a Rh catalyst to give the corresponding polymer, poly（1） with moderate number-average molecular weights. The poly（1） was soluble in toluene, CHCI3, CH2C12, THF, DMF, and DMSO, but insoluble in hexane, diethyl ether and MeOH. The specific rotation and circular dichroism （CD） spectroscopic studies revealed that poly（1） took predominantly one-handed helical structures. The presence of intramolecular hydrogen bonding was confirmed by liquid-state IR spectroscopy. The helicity of poly（1） could be tuned by temperature and anion. The helical conformation of the polymer was stable against Br but susceptible to F.     

Synthesis of helical poly(phenylacetylene)s bearing cinchona alkaloid pendants and their application to asymmetric organocatalysis

Four novel dynamic helical poly(phenylacetylene)s bearing cinchona alkaloids as pendant groups were synthesized starting from the commercially available cinchona alkaloids, cinchonidine, cinchonine, quinine, and quinidine, by the polymerization of the corresponding phenylacetylene monomers with a rhodium catalyst. These polymers exhibited an induced circular dichroism (ICD) in the UV–visible region of the polymer backbones in solution, resulting from the preferred‐handed helical conformation induced by the optically active cinchona alkaloid pendants. In response to the solvent used, their Cotton effect patterns and intensities were significantly changed accompanied by the changes in their absorption spectra probably due to the changes in their helical conformations, such as the inversion of the helical sense or helical pitch of the polymers. When these helical polymers were used as polymeric organocatalysts for the asymmetric conjugated addition and Henry reactions, the optically active products with a modest enantiomeric excess were obtained whose enantioselectivities were comparable to those obtained with the corresponding cinchona alkaloid‐bound monomers as the catalysts. However, we observed a unique enhancement of the enantioselectivity and a reversal of the stereoselectivity for some helical polymers, suggesting the important role of the helical chirality during the asymmetric organocatalysis. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2011     

Recyclable helical poly(phenylacetylene)‐supported catalyst for asymmetric aldol reaction in aqueous media

A novel one‐handed helical poly(phenylacetylene) bearing L‐hydroxyproline pendants (poly(PA‐P)) was synthesized as an eco‐friendly polymer‐supported catalyst for asymmetric reactions. The helical poly(PA‐P) catalyzed the asymmetric aldol reactions of cyclohexanone with p‐nitrobenzaldehyde, and showed good recyclability and higher enantiomeric excess (ee) in aqueous medias than that in organic medias. The one‐handed helicity of poly(PA‐P) was clearly affected by the water content in the aqueous media. The helical poly(PA‐P) showed the higher enantioselectivity (ee = 99%) than its monomer PA‐P (ee = 54%) in THF/H₂O (H₂O vol % = 25.0 vol %). After the one‐handed helical structure of poly(PA‐P) was destroyed by grinding treatment, the ee of the reaction clearly decreased from 99 to 49%. These indicate that the one‐handed helical structure of poly(PA‐P) played an important role in the high enantioselectivity of the asymmetric aldol reactions in the aqueous media. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019 , 57, 1024–1031     

Molecular structure of helical supramolecular dendrimers

The molecular structure of helical supramolecular dendrimers generated from self-assembling dendrons and dendrimers and from self-organizable dendronized polymers was elucidated for the first time by the simulation of the X-ray diffraction patterns of their oriented fibers. These simulations were based on helical diffraction theory applied to simplified atomic helical models, followed by Cerius2 calculations based on their complete molecular helical structures. Hundreds of samples were screened until a library containing 14 supramolecular dendrimers and dendronized polymers provided a sufficient number of helical features in the X-ray diffraction pattern of their oriented fibers. This combination of techniques provided examples of single-9(2) and -11(3) helices, triple-6(1), -8(1), -9(1), and -12(1) helices, and an octa-32(1) helix that were assembled from crownlike dendrimers, hollow and nonhollow supramolecular crownlike dendrimers, hollow and nonhollow supramolecular disklike dendrimers, and hollow and nonhollow supramolecular and macromolecular helicene-like architectures. The method elaborated here for the determination of the molecular helix structure was transplanted from the field of structural biology and will be applicable to other classes of synthetic helical assemblies. The determination of the molecular structure of helical supramolecular assemblies is expected to provide an additional level of precision in the design of helical functional assemblies resembling those from biological systems.     

Temperature‐Induced Chiroptical Changes in a Helical Poly(phenylacetylene) Bearing N,N‐Diisopropylaminomethyl Groups with Chiral Acids in Water

A stereoregular poly(phenylacetylene) bearing an N,N‐diisopropylaminomethyl group as the pendant (poly‐ 1 ) changed its structure into the prevailing one‐handed helical conformation upon complexation with optically active acids in water. The complexes exhibited induced circular dichroism (ICD) in the UV/Vis region of the polymer backbone. Poly‐ 1 is highly sensitive to the chirality of chiral acids and can detect a small enantiomeric imbalance in these acids, in particular, phenyl lactic acid in water. For example, a 0.005 % enantiomeric excess of phenyl lactic acid can be detected by CD spectroscopy. The observed ICD intensity and pattern of poly‐ 1 were dependent on the temperature and concentration of poly‐ 1 , probably due to aggregations of the polymer at high temperature as revealed by dynamic light scattering and AFM. On the basis of the temperature‐dependent ICD changes, the preferred chiral helical sense of poly‐ 1 was found to be controlled by noncovalent bonding interactions by using structurally different enantiomeric acids.     

Amplification of chirality in helical supramolecular polymers beyond the long-chain limit

The optical activity of helical homopolymers devoid of chiral centers increases drastically when a small amount of homochiral monomers is incorporated into them. We study this so-called sergeants-and-soldiers effect of chirality amplification in solutions of helical supramolecular polymers with a theoretical model that bears a strong resemblance to a one-dimensional, two-component Ising model. In the limit of very long self-assembled helical polymers, the strength of the sergeants-and-soldiers effect depends strongly on the free energy of a helix reversal and less so on the concentration of aggregating material. Outside the long-chain limit, we find the reverse--that is, a strong concentration dependence and a weak dependence on the helix-reversal energy. Our treatment gives an excellent agreement with recently published circular-dichroism measurements on mixed aggregates of discotic molecules in the solvents water and n-butanol, at two different overall concentrations.