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1.
2.
The relationships between experimental and theoretical 13C NMR chemical shifts of a pristine fullerene C60, monoadducts from [2 + n] cycloaddition (n = 1–3), and one [2 + 1] bis‐adduct are systematically analyzed for the first time by using diverse quantum‐chemical levels of theory. These levels involved B3LYP, B3PW91, B97‐2, mPW1PW91, PBE1PBE, and X3LYP hybrid functionals combined with 3‐21G, 6‐31G, 6‐31G(d), 6‐31G(d,p), 6‐31G(d,2p), LanL2DZ, and SDDAll basis sets. X3LYP/6‐31G approach is determined to have the lowest deviations from the 13C NMR experimental data compared to the other methods for all the fullerene compounds (mean absolute error value is 0.856 ppm and root mean squared error value is 1.197 ppm). The highest deviations are characteristic for α (sp2 C2/C5/C8/C10) and β (sp2 C6/C7/C11/C12) carbon atoms relative to a functionalization site and for those (sp3 C1/C9) directly attached with a side fragment in the [2 + n] monoadducts (n = 1–3). A probable reason of such deviation is that the approaches do not take into account a contribution of paramagnetic ring currents to 13C NMR chemical shifts. The results will be useful in design of novel fullerene derivatives and in performing unambiguous 13C NMR chemical shift assignments with modern quantum chemistry calculations.  相似文献   

3.
The synthesis of two O‐2′,3′‐cyclic ketals, i.e., 5 and 6 , of the cytostatic 5‐fluorouridine ( 2 ), carrying a cyclopentane and/or a cyclohexane ring, respectively, is described. The novel compounds were characterized by 1H‐, 19F‐, and 13C‐NMR, and UV spectroscopy, as well as by elemental analyses. Their crystal structures were determined by X‐ray analysis. Both compounds 5 and 6 show an anti‐conformation at the N‐glycosidic bond which is biased from +ac to +ap compared to the parent nucleoside 2 . The sugar puckering is changed from 2′E to 3′E going along with a reduction of the puckering amplitude τm by ca. 10–13° due to the ketalization. The conformation about the sugar exocyclic bond C(4′)? C(5′) of 5 and 6 remains unchanged, i.e., g+, compared with compound 2 .  相似文献   

4.
The reaction of 1‐methylimidazole and α,α‐dibromo‐p‐xylene was followed by a metathesis reaction with fluorinated anion sources, which yielded new fluorinated imidazolium salts [C6H4(CH2(C4H6N2)2]2+ 2[A] where A = BF4 ( 2 ), PF6 ( 3 ), CF3SO3 ( 4 ), and CF3COO ( 5 ). The compounds were characterized by 1H‐, 13C‐, 19F‐, 31P NMR, and IR spectroscopy. Single crystal X‐ray diffraction data of compounds 2 , 3 , and 4 were also reported, whereas compound 5 was found to be a liquid. The solid compounds crystallized in the monoclinic P21/c space group and have similar crystallographic parameters. The study revealed that the different fluorinated anions affected the spatial arrangement of atoms and the extent of cation–anion interactions, hence, influenced the stability and coordination properties of the imidazolium salts. A trend was observed which related the strength of cation–anion interaction to physical properties such as melting point.  相似文献   

5.
Nucleolytic ribozymes catalyze site‐specific cleavage of their phosphodiester backbones. A minimal version of the twister ribozyme is reported that lacks the phylogenetically conserved stem P1 while retaining wild‐type activity. Atomic mutagenesis revealed that nitrogen atoms N1 and N3 of the adenine‐6 at the cleavage site are indispensable for cleavage. By NMR spectroscopy, a pKa value of 5.1 was determined for a 13C2‐labeled adenine at this position in the twister ribozyme, which is significantly shifted compared to the pKa of the same adenine in the substrate alone. This finding pinpoints at a potential role for adenine‐6 in the catalytic mechanism besides the previously identified invariant guanine‐48 and a Mg2+ ion, both of which are directly coordinated to the non‐bridging oxygen atoms of the scissile phosphate; for the latter, additional evidence stems from the observation that Mn2+ or Cd2+ accelerated cleavage of phosphorothioate substrates. The relevance of this metal ion binding site is further emphasized by a new 2.6 Å X‐ray structure of a 2′‐OCH3‐U5 modified twister ribozyme.  相似文献   

6.
In the 1H and 13C NMR spectra of 1‐(2‐selenophenyl)‐1‐alkanone oximes, the 1H, the 13C‐3 and 13C‐5 signals of the selenophene ring are shifted by 0.1–0.4, 2.5–3.0 and 5.5–6.0 ppm, respectively, to higher frequencies, whereas those of the 13C‐1, 13C‐2 and 13C‐4 carbons are shifted by 4–5, ~11 and ~1.7 ppm to lower frequencies on going from the E to Z isomer. The 15N chemical shift of the oximic nitrogen is larger by 13–16 ppm in the E isomer relative to the Z isomer. An extraordinarily large difference (above 90 ppm) between the 77Se resonance positions is revealed in the studied oxime isomers, the 77Se peak being shifted to higher frequencies in the Z isomer. The trends in the changes of the measured chemical shifts are well reproduced by the GIAO calculations of the 1H, 13C, 15N and 77Se shielding constants in the energy‐favorable conformation with the syn orientation of the? C?N? O? H group relative to the selenophene ring. Copyright © 2009 John Wiley & Sons, Ltd.  相似文献   

7.
N‐vinyl‐2‐pyrrolidone/methyl acrylate (V/M) copolymers were prepared by free‐radical bulk polymerization using benzoyl peroxide as an initiator. The copolymer composition of these copolymers was calculated from 1H NMR spectra. The radical reactivity ratios for N‐vinyl‐2‐pyrrolidone (V) and methyl acrylate (M) were rV = 0.09, rM = 0.44. These reactivity ratios for the copolymerization of V and M were determined using the Kelen–Tudos and nonlinear least‐squares error‐in‐variable methods. The 13C{1H} and 1H NMR spectra of these copolymers overlapped and were complex. The complete spectral assignment of the 13C and 1H NMR spectra were done with distortionless enhancement by polarization transfer and two dimensional 13C‐1H heteronuclear single quantum correlation spectroscopic experiments. The two‐dimensional 1H‐1H homonuclear total correlation spectroscopic NMR spectrum showed the various bond interactions, thus inferring the possible structure of the copolymers. © 2002 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 40: 2225–2236, 2002  相似文献   

8.
N‐vinyl‐2‐pyrrolidone/methyl acrylate (V/M) copolymers were prepared by free‐radical bulk polymerization using benzoyl peroxide as an initiator. The copolymer composition of these copolymers was calculated from 1H NMR spectra. The radical reactivity ratios for N‐vinyl‐2‐pyrrolidone (V) and methyl acrylate (M) were rV = 0.09, rM = 0.44. These reactivity ratios for the copolymerization of V and M were determined using the Kelen–Tudos and nonlinear least‐squares error‐in‐variable methods. The 13C{1H} and 1H NMR spectra of these copolymers overlapped and were complex. The complete spectral assignment of the 13C and 1H NMR spectra were done with distortionless enhancement by polarization transfer and two dimensional 13C‐1H heteronuclear single quantum correlation spectroscopic experiments. The two‐dimensional 1H‐1H homonuclear total correlation spectroscopic NMR spectrum showed the various bond interactions, thus inferring the possible structure of the copolymers. © 2002 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 40: 2225–2236, 2002  相似文献   

9.
Metal‐binding scaffolds incorporating a Trp/His‐paired epitope are instrumental in giving novel insights into the physicochemical basis of functional and mechanistic versatility conferred by the Trp–His interplay at a metal site. Herein, by coupling biometal site mimicry and 1H and 13C NMR spectroscopy experiments, modular constructs EDTA‐(L ‐Trp, L ‐His) (EWH; EDTA=ethylenediamino tetraacetic acid) and DTPA‐(L ‐Trp, L ‐His) (DWH; DTPA=diethylenetriamino pentaacetic acid) were employed to dissect the static and transient physicochemical properties of hydrophobic/hydrophilic aromatic interactive modes surrounding biometal centers. The binding feature and identities of the stoichiometric metal‐bound complexes in solution were investigated by using 1H and 13C NMR spectroscopy, which facilitated a cross‐validation of the carboxylate, amide oxygen, and tertiary amino groups as the primary ligands and indole as the secondary ligand, with the imidazole (Im) N3 nitrogen being weakly bound to metals such as Ca2+ owing to a multivalency effect. Surrounding the metal centers, the stereospecific orientation of aromatic rings in the diastereoisomerism is interpreted with the Ca2+–EWH complex. With respect to perturbed Trp side‐chain rotamer heterogeneity, drastically restricted Trp side‐chain flexibility and thus a dynamically constrained rotamer interconversion due to π interactions is evident from the site‐selective 13C NMR spectroscopic signal broadening of the Trp indolyl C3 atom. Furthermore, effects of Trp side‐chain fluctuation on indole/Im orientation were the subject of a 2D NMR spectroscopy study by using the Ca2+‐bound state; a C? H2(indolyl)/C? H5(Im+) connectivity observed in the NOESY spectra captured direct evidence that the N? H1 of the Ca2+–Im+ unit interacted with the pyrrole ring of the indole unit in Ca2+‐bound EWH but not in DWH, which is assignable to a moderately static, anomalous, T‐shaped, interplanar π+–π stacking alignment. Nevertheless, a comparative 13C NMR spectroscopy study of the two homologous scaffolds revealed that the overall response of the indole unit arises predominantly from global attractions between the indole ring and the entire positively charged first coordination sphere. The study thus demonstrates the coordination‐sphere/geometry dependence of the Trp/His side‐chain interplay, and established that π interactions allow 13C NMR spectroscopy to offer a new window for investigating Trp rotamer heterogeneity near metal‐binding centers.  相似文献   

10.
Because of their extreme instability, it is generally difficult to synthesize and fully characterize open chain peroxides, also known as peroxols. In our attempt to investigate the mechanism of the Skraup–Doebner–Von Miller quinoline synthesis, we were able to obtain an unusual open chain peroxy‐quinoline, namely, 4‐(8‐ethoxy‐2,3‐dihydro‐1H‐cyclopenta[c]quinolin‐4‐yl)butane‐1‐peroxol (1), and its alcohol counterpart, namely 4‐(8‐ethoxy‐2,3‐dihydro‐1H‐cyclopenta[c]quinolin‐4‐yl)butan‐1‐ol (2) obtained as a side product during the same reaction. Although structurally similar, these two compounds appeared to display some very distinct physical and spectroscopic characteristics. This work reports detailed NMR studies and full 1H and 13 C NMR assignments for these two compounds. These assignments are based upon the analysis of the NMR spectra of these compounds including 1H, 13 C, COSY, gHSQC and gHMBC. The effect of the peroxide functional group on the chemical shift of neighboring carbons and protons was also investigated by comparing the NMR data of these two compounds. Furthermore, the effects of potential hydrogen bondings in 1, 2, and possible 1–1 dimer, 2–2 dimer and in prototypical model systems, as well as the stability of these compounds, were investigated computationally. The computed dissociation energies and NMR data support the interpretation of the experimental data. Copyright © 2012 John Wiley & Sons, Ltd.  相似文献   

11.
Studies of double‐stranded‐DNA binding have been performed with three isomeric bis(2‐(n‐pyridyl)‐1H‐benzimidazole)s (n=2, 3, 4). Like the well‐known Hoechst 33258, which is a bisbenzimidazole compound, these three isomers bind to the minor groove of duplex DNA. DNA binding by the three isomers was investigated in the presence of the divalent metal ions Mg2+, Co2+, Ni2+, Cu2+, and Zn2+. Ligand–DNA interactions were probed with fluorescence and circular dichroism spectroscopy. These studies revealed that the binding of the 2‐pyridyl derivative to DNA is dramatically reduced in the presence of Co2+, Ni2+, and Cu2+ ions and is abolished completely at a ligand/metal‐cation ratio of 1:1. Control experiments done with the isomeric 3‐ and 4‐pyridyl derivatives showed that their binding to DNA is unaffected by the aforementioned transition‐metal ions. The ability of 2‐(2‐pyridyl)benzimidazole to chelate metal ions and the conformational changes of the ligand associated with ion chelation probably led to such unusual binding results for the ortho isomer. The addition of ethylenediaminetetraacetic acid (EDTA) reversed the effects completely.  相似文献   

12.
Interaction of polyamines with nucleotides plays a key role in many biological processes. Here we use multiple NMR techniques to characterize interaction of spermidine with adenosine 5′‐triphosphate (ATP). Two‐dimensional 1H‐15N spectra obtained from gs‐HMBC experiments at varied pH show significant shift of N‐1 peak around pH 2.0–7.0 range, suggesting that spermidine binds to N‐1 site of ATP base. The binding facilitates N‐1 deprotonation, shifting its pKa from 4.3 to 3.4. By correlating 15N and 31P chemical shift data, it is clear that spermidine is capable of concurrently binding to ATP base and phosphate sites around pH 4.0–7.0. The self‐diffusion constants derived from 1H PFG‐diffusion measurements provide evidence that binding of spermidine to ATP is in 1:1 ratio, and pH variations do not induce significant nucleotide self‐association in our samples. 31P spectral analysis suggests that at neutral pH, Mg2+ ion competes with spermidine and shows stronger binding to ATP phosphates. From 31P kinetic measurements of myosin‐catalyzed ATP hydrolysis, it is found that binding of spermidine affects the stability and reactivity of ATP. These NMR results are important for advancing the studies on nucleotide–polyamine interaction and its impact on nucleotide structures and activities under varied conditions. Copyright © 2009 John Wiley & Sons, Ltd.  相似文献   

13.
Enrichment of the anti‐tumor compound barbigerone along with a rotenoid derivative from Millettia pachycarpa Benth. was performed by a two‐step high‐speed counter‐current chromatography (HSCCC) separation process. In the first step, 155.8 mg of target fraction (Fra6) was obtained from 400 mg ethyl acetate extract of M. pachycarpa Benth. with an increase in barbigerone from 5.1 to 13% via HSCCC using a solvent system of n‐hexane–ethyl acetate–methanol–water (5:4:5:3, v/v) under normal phase head to tail elution. HSCCC was repeated to eliminate the major contaminant in this initial fraction 6. After a separation time of 65 min, 22.1 mg barbigerone of 87.7% purity was obtained from Fra6 with the ternary solvent system of n‐hexane–methanol–water (2:2:1, v/v) under normal phase elution. Finally, preparative HPLC was employed for the further isolation of barbigerone and the rotenoid derivative. The structures were confirmed by ESI‐MS, 1H NMR and 13C NMR.  相似文献   

14.
Conventional and microwave assisted synthesis of new series of N‐[2‐{2‐(substituted phenyl)‐4‐oxo‐5‐(substituted benzylidene)‐1,3‐thiazolidine}‐iminoethyl]‐2‐aminothiazole 5a–5m have been developed. The cycloaddition reaction of thioglycolic acid with N‐{2‐(substituted benzylidenehydrazino)‐ethyl}‐2‐aminothiazole 3a–3m in the presence of anhydrous ZnCl2 afforded new heterocyclic compounds N‐[2‐{2‐(substituted phenyl)‐4‐oxo‐1,3‐thiazolidine}‐iminoethyl]‐2‐aminothiazole 4a–4m . The later product on treatment with several selected substituted aromatic aldehydes in the presence of C2H5ONa undergoes Knoevenagel reaction to yield 5a–5m . The structures of compounds 1 , 2 , 3a–3m , 4a–4m and 5a–5m were confirmed by IR, 1H NMR, 13C NMR, FAB‐Mass and chemical analysis. All above compounds were screened for their antimicrobial activities against some selected bacteria and fungi and antituberculosis study against M. tuberculosis.  相似文献   

15.
UV/Vis and NMR spectroscopy were used for the structural elucidation and thermodynamic and photochemical studies of the metal‐coordinated crown‐containing macrocyclic tweezer (E,E)‐ 1 . The bis(styryl) tweezer (E,E)‐ 1 formed two types of complexes with magnesium(II): a 1:1 intramolecular asymmetric sandwich complex [(E,E)‐ 1 ]?Mg2+ and a 1:2 complex [(E,E)‐ 1 ]?(Mg2+)2. In the former case, there is direct cation intramolecular exchange (0.299 s?1, ΔG=69.4 kJ mol?1) between two parts of the bis(styryl) tweezer (E,E)‐ 1 . Addition of barium(II) to the bis(styryl) tweezer (E,E)‐ 1 led to an intramolecular centrosymmetric sandwich 1:1 complex [(E,E)‐ 1 ]?Ba2+. Irradiation of [(E,E)‐ 1 ]?Ba2+ afforded reversible intramolecular [2π+2π] photocyclization with excellent stereoselectivity and quantitative yield. In contrast, irradiation of [(E,E)‐ 1 ]?(Mg2+)2 resulted in reversible stepwise E,Z‐isomerization.  相似文献   

16.
A series of aryl‐substituted enaminoketones and their thio analogues in CDCl3 solution and in the solid state were studied by the use of high‐resolution 1H and 13C as well as 13C cross polarization magic angle spinning (CP MAS) NMR spectra in combination with gauge including atomic orbitals‐density functional theory (GIAO‐DFT) calculations performed at the B3PW91/6–311 + + G(d,p) level of theory using the B3PW91/6‐311 + + G(d,p)‐optimized geometries. The analysis of the 13C NMR spectra in solution was done by using the Incredible Natural Abundance DoublE QUAntum Transfer Experiment (INADEQUATE) technique, whereas trends observed in the 13C shielding constants, calculated for the compounds studied, were a great help in assigning most of the signals in the 13C CP MAS NMR spectra. It was established on the basis of the experimental and theoretical NMR data that both groups of compounds exist in the form of Z‐s‐Z‐s‐E isomers in CDCl3 solution as well as in the solid state, with the NH hydrogen atom involved in intramolecular hydrogen bonding. This conclusion is in agreement with the fact that some of the compounds studied reveal liquid‐crystalline properties. Three‐bond H, H and C, H coupling constants measured in solution played a crucial role in the structure elucidation. Copyright © 2009 John Wiley & Sons, Ltd.  相似文献   

17.
Rigid N‐(substituted)‐2‐aza‐[3]‐ferrocenophanes L1 and L2 were easily synthesized from 1,1 ‐dicarboxyaldehydeferrocene and the corresponding amines. Ligands L1 and L2 were characterized by 1H NMR, 13C NMR and single‐crystal X‐ray crystallography. The coordination abilities of L1 and L2 with metal ions such as Cu2+, Mg2+, Ni2+, Zn2+, Pb2+ and Cd2+ were evaluated by cyclic voltammetry. The electrochemical shift (ΔE1/2) of 125 mV was observed in the presence of Cu2+ ion, while no significant shift of the Fc/Fc + couple was observed when Mg2+, Ni2+, Zn2+, Pb2+, Cd2+ metal ions were added to the solution of L1 in the mixture of MeOH and H2O. Moreover, the extent of the anodic shift of redox potentials was approximately equal to that induced by Cu2+ alone when a mixture of Cu2+, Mg2+, Ni2+, Zn2+, Pb2+ and Cd2+ was added to a solution of L1. Ligand L1 was proved to selectively sense Cu2+ in the presence of large, excessive first‐row transition and late‐transition metal cations. The coordination model was proposed from the results of controlled experiments and quantum calculations. Copyright © 2012 John Wiley & Sons, Ltd.  相似文献   

18.
The synthesis, characterization, photophysical properties, and theoretical analysis of a series of tetraaza porphyrin analogues ( H? Pn : n=1–4) containing a dipyrrin subunit and an embedded 1,10‐phenanthroline subunit are described. The meso‐phenyl‐substituted derivative ( H? P1 ) interacts with a Mg2+ salt (e.g., MgCl2, MgBr2, MgI2, Mg(ClO4)2, and Mg(OAc)2) in MeCN solution, thereby giving rise to a cation‐dependent red‐shift in both the absorbance‐ and emission maxima. In this system, as well as in the other H? Pn porphyrin analogues used in this study, the four nitrogen atoms of the ligand interact with the bound magnesium cation to form Mg2+–dipyrrin–phenanthroline complexes of the general structure MgX? Pn (X=counteranion). Both single‐crystal X‐ray diffraction analysis of the corresponding zinc‐chloride derivative ( ZnCl? P1 ) and fluorescence spectroscopy of the Mg‐adducts that are formed from various metal salts provide support for the conclusion that, in complexes such as MgCl? P1 , a distorted square‐pyramidal geometry persists about the metal cation wherein a chloride anion acts as an axial counteranion. Several analogues ( H? Pn ) that contain electron‐donating and/or electron‐withdrawing dipyrrin moieties were prepared in an effort to understand the structure–property relationships and the photophysical attributes of these Mg–dipyrrin complexes. Analysis of various MgX? Pn (X=anion) systems revealed significant substitution effects on their chemical, electrochemical, and photophysical properties, as well as on the Mg2+‐cation affinities. The fluorescence properties of MgCl? Pn reflected the effect of donor‐excited photoinduced electron transfer (dPET) processes from the dipyrrin subunit (as a donor site) to the 1,10‐phenanthroline acceptor subunit. The proposed dPET process was analyzed by electron paramagnetic resonance (EPR) spectroscopy and by femtosecond transient absorption (TA) spectroscopy, as well as by theoretical DFT calculations. Taken together, these studies provide support for the suggestion that a radical species is produced as the result of an intramolecular charge‐transfer process, following photoexcitation. These photophysical effects, combined with a mixed dipyrrin–phenanthroline structure that is capable of effective Mg2+‐cation complexation, lead us to suggest that porphyrin‐inspired systems, such as H? Pn , have a role to play as magnesium‐cation sensors.  相似文献   

19.
The possible stable forms and molecular structures of 1‐cyclohexylpiperazine (1‐chpp) and 1‐(4‐pyridyl)piperazine (1‐4pypp) molecules have been studied experimentally and theoretically using nuclear magnetic resonance(NMR) spectroscopy. 13C, 15N cross‐polarization magic‐angle spinning NMR and liquid phase1H, 13C, DEPT, COSY, HETCOR and INADEQUATE NMR spectra of 1‐chpp (C10H20N2) and 1‐4pypp (C9H13N2) have been reported. Solvent effects on nuclear magnetic shielding tensors have been investigated using CDCl3, CD3 OD, dimethylsulfoxide (DMSO)‐d6, (CD3)2CO, D2O and CD2Cl2. 1H and 13C NMR chemical shifts have been calculated for the most stable two conformers, equatorial–equatorial (e–e) and axial–equatorial (a–e) forms of 1‐chpp and 1‐4pypp using B3LYP/6‐311++G(d,p)//6‐31G(d) level of theory. Results from experimental and theoretical data showed that the molecular geometry and the mole fractions of stable conformers of both molecules are solvent dependent. Copyright © 2009 John Wiley & Sons, Ltd.  相似文献   

20.
Reactions of indole‐2,3‐diones with biuret afforded 1,3‐dihydro‐3‐ureidoformimido‐2H‐indol‐2‐ones and spiro[3H‐indole‐3,2′(1′H )‐(1,3,5)triazine]‐2,4′,6′(1H ,3′H ,5′H )‐triones indicated these to be solvent dependent. The chemical structures of the products were elucidated by their comprehensive spectroscopic (IR, 1H‐NMR, 13C‐NMR, 19F‐NMR, and Mass) as well as analytical analysis.  相似文献   

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