SiH4与HX(X=F,Cl,Br,I)形成的二氢键复合物的结构特性及本质

对SiH4与HX形成的二氢键复合物的结构特征及本质进行了探讨.在MP2/6-311++G(3d,3p)水平优化、频率验证得到复合物的分子结构,通过分子间距离及电子密度等值线图,确认SiH4与卤化氢已形成了二氢键复合物.MP2/6-311++G(3d,3p)水平下进行BSSE校正后的结合能为2.703～4.439 kJ/mol.用对称匹配微扰理论对结合能进行分解,分解结果显示,SiH4…HX(X=F,Cl,Br,I)二氢键复合物中静电能对总吸引能的贡献小于28%,并且相对稳定.这就是说SiH4…HX二氢键复合物的本质并非静电作用.而是静电能、诱导能、色散能、交换能对总结合能的贡献都非常重要.     

气相中O3与HSO自由基间的氢键复合物

气相中O3与HSO自由基之间的相互作用及其反应在大气化学中非常重要.在DFT-B3LYP/6-311++G**和MP2/6-311++G**水平上求得O3+HSO复合物势能面上的稳定构型,B3LYP方法得到了三种构型(复合物Ⅰ,Ⅱ和Ⅲ),而MP2方法只能得到一种构犁(复合物Ⅱ).在复合物Ⅰ和Ⅲ中,HSO单元中的1H原子作为质子供体.与O3分子中的端基O原子作为质子受体相互作用,形成红移氢键复合物;而在复合物Ⅱ中,虽与复合物Ⅰ和Ⅲ中具有相间的质子供体和质子受体,却形成了蓝移氢键复合物.B3LYP/6-311++G**水平上计算的单体间相互作用能的计算考虑了基组重甍误差(BSSE)和零点振动能(ZPVE)校正,其值在-3.37到-4.55 kJ·mol-1之间.采用自然键轨道理论(NBO)对单体间相互作用的本质进行了考查,并通过分子中原子理论(AIM)分析了三种复合物中氢键的电子密度拓扑性质.     

气相中O3与HSO自由基间的氢键复合物

气相中O3与HSO自由基之间的相互作用及其反应在大气化学中非常重要. 在DFT-B3LYP/6-311++G**和MP2/6-311++G**水平上求得O3+HSO复合物势能面上的稳定构型, B3LYP方法得到了三种构型(复合物I, II和III), 而MP2方法只能得到一种构型(复合物II). 在复合物I和III中, HSO单元中的1H原子作为质子供体, 与O3分子中的端基O原子作为质子受体相互作用, 形成红移氢键复合物; 而在复合物II中, 虽与复合物I和III中具有相同的质子供体和质子受体, 却形成了蓝移氢键复合物. B3LYP/6-311++G**水平上计算的单体间相互作用能的计算考虑了基组重叠误差(BSSE)和零点振动能(ZPVE)校正, 其值在-3.37到-4.55 kJ·mol-1之间. 采用自然键轨道理论(NBO)对单体间相互作用的本质进行了考查, 并通过分子中原子理论(AIM)分析了三种复合物中氢键的电子密度拓扑性质.     

SiH4与HX(X=F,Cl,Br,I)形成的二氢键复合物的结构特征及本质

本文就SiH4与HX形成的二氢键复合物的结构特征及本质进行了探讨。在MP2/6-311++G(3d,3p)水平优化、频率验证得到复合物的分子结构,通过分子间距离及电子密度等值线图,我们确认SiH4与卤化氢已形成了二氢键复合物。MP2/6-311++G(3d,3p)水平下进行BSSE校正后的结合能为2.703－4.439 KJ/mol。用对称匹配微绕理论(SAPT)对结合能进行分解,分解结果显示,SiH4匟X(X=F,Cl,Br,I)二氢键复合物中静电能对总吸引能的贡献小于28％,并且相对稳定,这就是说SiH4匟X二氢键复合物的本质并非静电作用,而是静电能、诱导能、色散能、交换能对总结合能的贡献都非常重要。     

SiH4与HX(X=F,Cl,Br,I)形成的二氢键复合物的结构特征及本质

本文就SiH4与HX形成的二氢键复合物的结构特征及本质进行了探讨。在MP2/6-311++G(3d,3p)水平优化、频率验证得到复合物的分子结构,通过分子间距离及电子密度等值线图,我们确认SiH4与卤化氢已形成了二氢键复合物。MP2/6-311++G(3d,3p)水平下进行BSSE校正后的结合能为2.703－4.439 KJ/mol。用对称匹配微绕理论(SAPT)对结合能进行分解,分解结果显示,SiH4匟X(X=F,Cl,Br,I)二氢键复合物中静电能对总吸引能的贡献小于28％,并且相对稳定,这就是说SiH4匟X二氢键复合物的本质并非静电作用,而是静电能、诱导能、色散能、交换能对总结合能的贡献都非常重要。     

HOCl…HCOCl复合物的结构和电子性质

在DFT-B3LYP/6-311++G**水平上求得HOCl+HCOCl复合物势能面上的四种稳定构型(S1,S2,S3和S4).其中,在复合物S1和S3中,HOCl单体的5H原子作为质子供体,与HCOCl单体中作为质子受体的10原子相互作用,形成红移氢键复合物;在复合物S4中,HOCl单体的7Cl原子作为质子供体,与HCOCl单体中作为质子受体的IO原子相互作用,形成红移卤键复合物;而在复合物S2中,同时存在2C-3H…6O蓝移氢键和4Cl…5O相互作用.在MP2/6-311++G**水平上计算的单体间的相互作用能考虑了基组重叠误差(BSSE)和零点振动能(ZPVE)校正,其值在-5.05与-14.76 kJ·mol-1之间.采用自然键轨道理论(NBO)对两种单体间相互作用的本质进行了考查,并通过分子中原子理论(AIM)分析了复合物中氢键和卤键键鞍点处的电子密度拓扑性质.     

SiH_4与AB型卤素互化物之间的反转氢键

采用从头算方法对SiH4与AB型卤素互化物(ClF、BrF、IF、ICl、IBr、BrCl)形成的复合物的结构特征及本质进行了探讨.在MP2/6-311++G(3d,3p)水平上优化复合物的分子结构,并进行频率验证.通过分子间距离、自然键轨道(NBO)净电荷迁移数及分子图,确认SiH4与卤素互化物形成反转氢键型复合物.在MP2/6-311++G(3d,3p)水平上进行基组重叠误差(BSSE)校正后的作用能为-5.113--9.468kJ·mol-1.用对称匹配微扰理论(SAPT)对作用能进行分解,结果显示,诱导能对总吸引能的贡献在55.0%到72.2%之间,是最主要的贡献部分,静电能和色散能对总吸引能的贡献都小于25.0%.     

Theoretical Study on the Structures and Isomerization of Germylenoid GeH_2LiCl

Using geometrical optimization and DFT method at the B3LYP/6-311++G (3df,3pd) level, four equilibrium geometries and one transition state of GeH2LiCl were identified, and the structures at the MP2/6-311++G(3df,3pd) level were calculated simultaneously. We also studied the solvent effects on the structures of Germylenoid GeH2LiCl at the B3LYP/6-311++G (3df,3pd) level. The two more stable forms are suggested to be the p-complex and three-membered ring. The vibrational frequencies and infrared intensities were computed at the B3LYP/6-311++G (3df,3pd) level.     

PH~3...H~2O体系分子间相互作用的从头计算MO研究

在MP2/6-311++G(3d,3p)水平,对PH~3...H~2O体系可能存在的氢键复合物进行了全自由度能量梯度优化,发现PH~3...H~2O体系存在三个能量极小结构A,B和C。其中结构A和B以H~2O作为质子授体,结构C以PH~3作为质子授体,结构A较结构B和C分别稳定6.52kJ/mol和8.18kJ/mol。结构A具有C~s对称性,其结构中P原子和O原子间距离为354.78nm,键角OHP为171.35ⅲ,属于接近于直线的传统型氢键结构。进一步在高级电子相关校正的MP4SDTQ下,用6-311++G(3df,3pd)基加上键函数{3s3p2d1f},通过BSSE校正,精确计算了结构A的结合能为-10.84kJ/mol。     

HOCl…HCOCl复合物的结构和电子性质

在DFT-B3LYP/6-311++G**水平上求得HOCl+HCOCl复合物势能面上的四种稳定构型(S1, S2, S3和S4). 其中, 在复合物S1和S3中, HOCl单体的5H原子作为质子供体, 与HCOCl单体中作为质子受体的1O原子相互作用, 形成红移氢键复合物; 在复合物S4中, HOCl单体的7Cl原子作为质子供体, 与HCOCl单体中作为质子受体的1O原子相互作用, 形成红移卤键复合物; 而在复合物S2中, 同时存在2C—3H…6O蓝移氢键和4Cl…5O相互作用. 在MP2/6-311++G**水平上计算的单体间的相互作用能考虑了基组重叠误差(BSSE)和零点振动能(ZPVE)校正, 其值在-5.05与-14.76 kJ·mol-1之间. 采用自然键轨道理论(NBO)对两种单体间相互作用的本质进行了考查, 并通过分子中原子理论(AIM)分析了复合物中氢键和卤键键鞍点处的电子密度拓扑性质.     

Inverse hydrogen bonds between SiH_4 and hydrides of Na,Mg and Be

The optimized geometries of the three complexes between MeHn (Me=Na,Mg,Be;n=1 or 2) and SiH4 have been calculated at the B3LYP/6-311++g**,MP2/6-311++g(3df,3pd) and MP2/aug-cc-pvtz levels,respectively.The red-shift inverse hydrogen bonds (IHBs) based on Si-H,an electron donor,were reported.The calculated binding energies with basis set super-position error (BSSE) correction of the three complexes are-5.98,-8.65 and-3.96 kJ mol-1 (MP2/6-311++g(3df,3pd)),respectively,which agree with the results obtained via M...     

单电子卤键复合体系H3C···Br-Y(Y=H, CN, NC, CCH, C2H3)的作用机制

对单电子溴键复合物H₃C···Br—Y(Y=H, CCH, CN, NC, C2H3)的结构与性质进行了理论研究. 在B3LYP/6-311++G**水平上计算了稳定构型并做了频率分析. BSSE矫正的相互作用能(E^BSSE)和NBO及AIM分析输入的波函数在MP2/6-311++G**水平下完成. 复合物H₃C···Br—Y中, CH₃(供电子体)自由基均提供一未成对电子与Br—Y中Br(受电子体)形成了单电子溴键, 此单电子溴键也具有“三电子”键的特征. 单电子溴键的形成导致甲基H的背向Y弯曲和Br—Y键的拉长及红移单电子溴键复合物的产生. 考察了电子受体中不同取代基, C(spⁿ)-Br杂化及溶剂的存在对复合物作用的影响, 将单电子氢键, 单电子卤键和单电子锂键的作用强度做了对比, 进一步对Popelier提出的氢键体系中的前三个重要拓扑指标在单电子溴键体系中的重现性进行了探讨.     

An Ab Initio Study of the Complexes Formed by the Positive Acetylene Ion with the Hydrogen and Nitrogen Molecules and the Argon Atom

The complexes formed by the positive acetylene ion with the hydrogen molecule, the nitrogen molecule, and the argon atom are investigated with ab initio calculations using the 6-311G** and the 6-31+G(2df,2pd) basis sets. MP2/6-311G** energies and optimum geometries are obtained, as well as single-point MP3, MP4, and QCISD(T) energies with the MP2/6-311G** optimized geometries. Single-point calculations are performed with the 6-31+G(2df,2pd) basis set at MP2/6-311G** optimized geometries.     

DFT Calculations and NBO Analysis of 2-Chloroethylethyldichlorosilane Unimolecular Elimination Kinetics in the Gas Phase

Ab initio molecular orbital calculations have been used to investigate the thermal decomposition kinetics of 2-chloroethylethyldichlorosilane at the B3LYP/6-311+G**,B3PW91/6-311+G**,and MPW1PW91/6-311+G** levels of theory.Among these methods,the results(activation parameters) obtained using the B3LYP/6-311+G** level are in good agreement with the available experimental data.The calculated data imply that in the unimolecular β-elimination reactions of the studied compound in the gas phase,the polarization of C(1)-Cl(3) and C(1)-H(4) bonds in the sense of C(1)δ+-Cl(3)δ-and C(1)δ+-H(4)δ-,respectively,is a determining factor in the gas phase elimination reactions 1,2 and 3.Analysis of bond order,natural bond orbital charges,bond indexes,synchro-nicity parameters,and IRC calculations suggest the elimination of 2-chloroethylethyldichlorosilane via reactions 1～3 can be described as concerted and slightly asynchronous.The transition state structures of these reactions are a four-membered cyclic structure.     

Cu^2＋诱导甘氨酸质子迁移机理的理论研究

采用CCSD/6-31＋＋G＊＊//B3LYP/6-31＋＋G＊＊方法研究了Cu2＋诱导甘氨酸质子迁移的机理.优化得到了7个中性配合物和1个两性配合物,其中两性配合物最稳定,结合能为215.93 kcal mol-1.中性构型间通过分子内单键的旋转相互转化,C-N、C-C和C-O键旋转的能垒范围分别为1.62～2.49、0.27～7.80和2.27～16.97 kcal mol-1;中性构型N6经质子迁移变为两性构型,能垒为33.82 kcal mol-1.Cu2＋作用于甘氨酸,使甘氨酸N5原子负电荷减少超过0.5,降低了N5对H6原子的库仑吸引,钝化了共价键B（O3–H6）,动力学上不利于H6质子迁移;但是H6质子迁移后,形成的两性构型Z1却是热力学最稳定体系.     

Microwave spectrum of 3-butyne-1-thiol: evidence for intramolecular S-H...pi hydrogen bonding

The microwave spectrum of 3-butyne-1-thiol has been studied by means of Stark-modulation microwave spectroscopy and quantum-chemical calculations employing the B3LYP/6-311++G(3df,2pd), MP2/aug-cc-pVTZ, MP2/6-311++G(3df,2pd), and G3 methods. Rotational transitions attributable to two conformers of this molecule were assigned. One of these conformers possesses an antiperiplanar arrangement of the atoms S-C1-C2-C3, while the other is synclinal and stabilized by the formation of an intramolecular hydrogen bond between the H-atom of the thiol group and the pi-electrons of the C[triple bond]C triple bond. The energy difference between these conformers was estimated to be 1.7(4) kJ mol(-1) by relative intensity measurements, with the hydrogen-bonded conformer being lower in energy. The spectra of five vibrationally excited states of the synclinal conformer were observed, and an assignment of these states to particular vibrational modes was made with the aid of a density functional theory (DFT) calculation of the vibrational frequencies at the B3LYP/6-311++G(3df,2pd) level of theory.     

pi-H...O hydrogen bonds: multicenter covalent pi-H interaction acts as the proton-donating system

The MP2 method and the Pople-style basis sets 6-311++G(d,p), 6-311++G(2df,2pd), and 6-311++G(3df,3pd) were used to perform calculations on H3O+...C2H2 and C2H3+...C2H2 complexes and related species. Hydrogen bonds existing for the analyzed complexes were investigated as well as related pi-H...O --> pi...H-O and pi-H...pi --> pi...H-pi proton-transfer processes. For some of the complexes analyzed the multicenter pi-H interaction possessing the properties of a covalent bond acts as a proton donor; more generally it is classified as the Lewis acid. The quantum theory of "atoms in molecules" (QTAIM) was also applied to deepen the nature of these interactions in terms of characteristics of bond critical points. The pi-H...O, O-H...pi, and pi-H...pi interactions analyzed here may be classified as hydrogen bonds since their characteristics are the same as or at least similar to those of typical hydrogen bonds. H...pi interactions are common in crystal structures of organic and organometallic compounds. The analyses performed here show a continuum of such interactions since there are H...pi contacts possessing the characteristics of weak intermolecular interactions on the one hand and pi-H multicenter covalent bonds on the other. Ab initio and QTAIM results support the latter statements.     

Weakly bound complexes of N2O: an ab initio theoretical analysis toward the design of N2O receptors

Ab initio calculations at MP2/6-311++G(2d,2p) and MP2/6-311++G(3df,3pd) computational levels have been used to analyze the interactions between nitrous oxide and a series of small and large molecules that act simultaneously as hydrogen bond donors and electron donors. The basis set superposition error (BSSE) and zero point energy (ZPE) corrected binding energies of small N2O complexes (H2O, NH3, HOOH, HOO*, HONH2, HCO2H, H2CO, HCONH2, H2CNH, HC(NH)NH2, SH2, H2CS, HCSOH, HCSNH2) vary between -0.93 and -2.90 kcal/mol at MP2/6-311++G(3df,3pd) level, and for eight large complexes of N2O they vary between -2.98 and -3.37 kcal/mol at the MP2/6-311++G(2d,2p) level. The most strongly bound among small N2O complexes (HCSNH2-N2O) contains a NH..N bond, along with S-->N interactions, and the most unstable (H2S-N2O) contains just S-->N interactions. The electron density properties have been analyzed within the atoms in molecules (AIM) methodology. Results of the present study open a window into the nature of the interactions between N2O with other molecular moieties and open the possibility to design N2O abiotic receptors.