5-甲基胞嘧啶及胞嘧啶无辐射失活的半经典动力学模拟和CASSCF计算

采用半经典动力学方法模拟了5-甲基胞嘧啶(5m-Cyt)和胞嘧啶(Cyt)在267 nm紫外光辐射下的光物理失活过程. 模拟发现, 5m-Cyt 和Cyt 的激发态通过C₅－C₆键的扭曲以及甲基(或H₅)和H₆原子平面外振动失活.失活时, 甲基(或H₅)和H₆原子几乎与环面垂直并指向不同方向, 形成“双自由基态”. 由于甲基的体积比H原子的大, 振动频率较小, 使得C₅原子的变形受到抑制, 导致5m-Cyt 的激发态寿命比胞嘧啶更长. 完全活性空间自洽场(CASSCF)计算显示, 5m-Cyt的圆锥交叉(CI)点能量比Cyt 高0.3 eV, 这也证明5m-Cyt演化至CI 需要克服更大的能垒, 因此激发态寿命长于胞嘧啶.     

π堆积的腺嘌呤-胸腺嘧啶体系激发态电荷转移和无辐射失活的半经典动力学模拟

采用半经典电子-辐射-离子动力学(SERID)模型模拟了π堆积的腺嘌呤-胸腺嘧啶(A-T)体系激发态的光物理失活过程. 设置激光脉冲仅作用于T, 模拟发现电子由A转移到T, 形成(A⁺T^-)^*激基缔合物(exciplex). 当分子间距缩短至0.300 nm时, 由于轨道离域效应产生电荷重组, 体系恢复电中性; 当A分子的C4'－C5'扭曲程度最大时, 体系通过避免交叉点衰减至基态. Exciplex 的失活途径由分子间距离和A分子的变形程序两个因素决定. 由于A分子的C4'、C5'原子位阻较大, 难以达到失活所必需的强烈扭曲, 因此(A-T)^*的寿命比胸腺嘧啶堆积体系(T-T)^*显著增长.     

飞秒时间分辨的光电子影像技术研究2-氯吡啶超快内转换动力学

利用时间分辨的飞秒光电子影像技术结合时间分辨的质谱技术, 研究了2-氯吡啶分子激发态的超快过程. 实时观察到了2-氯吡啶分子第二激发态(S₂)向第一激发态(S₁)高振动能级的的超快内转换过程,该内转换的时间常数为(162±5)fs. 实验结果表明, 通过S₂/S₀的锥形交叉衰减到基态的衰减通道也是退布居的重要通道, 其时间尺度为(5.5±0.3) ps.     

气相中Cu+和Zn+与CS2反应的计算研究

以Cu⁺和Zn⁺与CS₂反应作为第一过渡金属离子与CS₂反应的范例体系. 采用密度泛函UB3LYP/6-311+G^*方法计算研究了第一过渡金属离子在基态和激发态与CS₂反应的反应机理. 全参数优化了反应势能面上各驻点的几何构型, 用频率分析方法和内禀反应坐标(IRC)方法对过渡态进行了验证. 并用UCCSD(T)/6-311G^*方法对各驻点作了单点能量校正. 在Cu⁺与CS₂反应中, 计算了单重态初始中间体¹IM1到三重态插入型中间体³IM2的反应交叉势能面. 确定了第一过渡金属离子与CS₂的反应为插入-消去反应, 找到了基态和激发态金属离子与CS₂反应的主要通道.     

二聚体C2H4-nFn···LiH (n=0, 1, 2)中π锂键的性质和弱方向性

采用二级微扰理论(MP2)量子化学研究方法, 对C₂H_4-nF_n···LiH (n=0, 1, 2)二聚体的结构和π锂键性质进行了分析. 结果表明氟原子的取代改变了乙烯分子的π电子云形状, 从而使二聚体体系中的π锂键发生偏移、伸长和弯曲. 通过与类似的π氢键体系C₂H_4-nF_n···HF (n=0, 1, 2)比较, 发现π锂键在二级弱相互作用的影响下, 发生了明显的弯曲, 表现出弱的方向性. 在CCSD(T)/6-311++G(3df, 3pd)理论水平下, 二聚体的相互作用能强弱顺序为: 33.85 kJ·mol^-1 (C₂H₄-LiH)>27.32 kJ·mol^-1 (C₂H₃F-LiH)>21.34 kJ·mol^-1 (cis-C₂H₂F₂-LiH)>20.25 kJ·mol^-1 (g-C₂H₂F₂-LiH), 说明氟取代削减了乙烯分子与LiH之间的相互作用.     

气相中Cu+和Zn+与CS2反应的计算研究

以Cu⁺和Zn⁺与CS₂反应作为第一过渡金属离子与CS₂反应的范例体系. 采用密度泛函UB3LYP/6-311+G^*方法计算研究了第一过渡金属离子在基态和激发态与CS₂反应的反应机理. 全参数优化了反应势能面上各驻点的几何构型, 用频率分析方法和内禀反应坐标(IRC)方法对过渡态进行了验证. 并用UCCSD(T)/6-311G^*方法对各驻点作了单点能量校正. 在Cu⁺与CS₂反应中, 计算了单重态初始中间体¹IM1到三重态插入型中间体³IM2的反应交叉势能面. 确定了第一过渡金属离子与CS₂的反应为插入-消去反应, 找到了基态和激发态金属离子与CS₂反应的主要通道.     

一种含咔唑基团的混配型钌(II)配合物的合成、表征和酸碱性质研究

合成了钌(II)配合物cis-[Ru(HL)(Hdcbpy)(NCS)₂]^－•[N(C₄H₉)₄]^＋ (HL＝2-(9-乙基-9H-3-咔唑基)-1H-咪唑[4,5-f] [1,10]邻菲啰啉, H₂dcbpy＝4,4'-二羧酸-2,2'-联吡啶). 采用元素分析、核磁共振氢谱、红外光谱、紫外-可见吸收光谱、质谱(MS)对配合物进行了表征. 通过紫外-可见吸收光谱和稳态荧光光谱, 研究了该配合物的基态和激发态酸碱性质. 结果表明该配合物在基态时能发生5步质子化/去质子化反应, 表现出基于光致发光强度和激发态能量转移途径的质子化/去质子化诱导的分子开关性质.     

密度泛函理论研究十二烷硫醇在Au(111)面上的吸附

采用第一性原理方法研究了十二烷硫醇(C₁₂H₂₅SH)分子在Au(111)面上未解离和解离吸附的结构、能量和吸附性质,在此基础上分析判断长链硫醇分子在Au(111)面吸附时S―H键的解离, 以及分子链长度对吸附结构和能量的影响. 计算了S原子在不同位置以不同方式吸附的系列构型, 结果表明在S―H键解离前和解离后,均存在两种可能的表面结构, 直立吸附构型和平铺吸附构型; 未解离的C₁₂H₂₅SH分子倾向于吸附在top位, 吸附能为0.35-0.38 eV; H原子解离后C₁₂H₂₅S基团倾向于吸附在bri-fcc位, 吸附能量为2.01-2.09 eV. 比较分析未解离吸附和解离吸附, 发现C₁₂H₂₅SH分子未解离吸附相较于解离吸附要稳定, 未解离吸附属于弱化学吸附.局域电子态密度和差分电荷密度分析进一步验证了S―H解离后S原子与表面之间成键的数目增加, 而且键合更强. 同时我们发现长链硫醇的吸附能量较短链硫醇的吸附能量略大, S原子与表面Au原子之间的距离略小.     

钴(Ⅲ)催化CpCoS2C2B10H10分子内B(3)/B(6)位和Cp配体偶联

半夹芯16e化合物CpCoS₂C₂B₁₀H₁₀(Cp:cyclopentadienyl) (1)与HC≡CCO₂Me在2-甲基二硫代丙酸存在下反应生成化合物{(C₅H₄CoS₂C₂B₉H₉)(CH=CHCO₂Me)(Me₂C=CS₂H)} (2)和(Me₂C=CS₂H)₃Co (3)。在化合物2中, 原料化合物1中的一个S-Co键断裂, 该S原子与一分子HC≡CCO₂Me末端炔基碳原子连接。Co原子与2-甲基二硫代丙酸的S原子连接成键, 2-甲基二硫代丙酸分子中的SH基团与Co原子通过配位键相连;同时, Cp环的一个碳原子与碳硼烷笼体的B(3)/B(6)位相连, 该B(3)/B(6)位的氢原子迁移到炔烃HC≡CCO₂Me的内部炔基碳原子上形成反式烯键。3个2-甲基二硫代丙酸分子中的3个S原子分别与1中的Co原子通过共价键连接, 3个SH基团与Co原子通过配位键相连, 从而形成化合物3。化合物2和3分别用红外、核磁、元素分析、质谱和单晶X-射线衍射分析等方法进行了表征。     

钴(Ⅲ)催化CpCoS2C2B10H10分子内B(3)/B(6)位和Cp配体偶联

半夹芯16e化合物CpCoS₂C₂B₁₀H₁₀(Cp：cyclopentadienyl) (1)与HC≡CCO₂Me在2-甲基二硫代丙酸存在下反应生成化合物{(C₅H₄CoS₂C₂B₉H₉)(CH=CHCO₂Me)(Me₂c=CS₂H)} (2)和(Me₂c=CS₂H)₃Co (3)。在化合物2中, 原料化合物1中的一个S-Co键断裂, 该S原子与一分子HC≡CCO₂Me末端炔基碳原子连接。Co原子与2-甲基二硫代丙酸的S原子连接成键, 2-甲基二硫代丙酸分子中的SH基团与Co原子通过配位键相连;同时, Cp环的一个碳原子与碳硼烷笼体的B(3)/B(6)位相连, 该B(3)/B(6)位的氢原子迁移到炔烃HC≡CCO₂Me的内部炔基碳原子上形成反式烯键。3个2-甲基二硫代丙酸分子中的3个S原子分别与1中的Co原子通过共价键连接, 3个SH基团与Co原子通过配位键相连, 从而形成化合物3。化合物2和3分别用红外、核磁、元素分析、质谱和单晶X-射线衍射分析等方法进行了表征。     

Bonded excimer in stacked adenines:Semiclassical simulations

The nonradiative decay of a π-stacked pair of adenine molecules,one of which was excited by an ultrafast laser pulse,is studied by semiclassical dynamics simulations.This simulation investigation is focused on the effect of the formation of bonded excimer in stacked adenines on the mechanism of ultrafast decay.The simulation finds that the formation of the bonded excimer significantly lowers the energy gap between the LUMO and HOMO and consequently facilitates the deactivation of the electronically excited molecule.On the other hand,the formation of the chemical bond between two stacked adenines restricts the deformation vibration of the pyrimidine of the excited molecule due to the steric effect.This slows down the formation of the coupling between the HOMO and LUMO energy levels and therefore delays the deactivation process of the excited adenine molecule to the electronic ground state.     

堆积的胸腺嘧啶体系光物理失活的动力学模拟

采用半经典动力学方法模拟了π堆积的胸腺嘧啶体系最低激发态的光物理失活过程.设置激光脉冲仅作用于一个胸腺嘧啶分子T,另一胸腺嘧啶分子T’保持基态.模拟发现由于T与T’之间存在π堆积相互作用,导致电荷转移,形成T带负电荷、T’带正电符的激基复合物.由于相邻分子的空间效应阻碍了激发的T分子到达圆锥相交所必需的强烈扭曲,激基复合物的寿命比单体增长.当分子间距离缩短至0.3 nm后,T分子C₅—C₆键扭曲程度最大,此时发生电荷重组,两个胸腺嘧啶分子均恢复电中性.电荷重组诱导T’分子发生畸变,并在C₅’—C₆’扭曲最大时避免相交,体系衰减至基态,T和T’分子均恢复平面构型.     

Detailed dynamics of the nonradiative deactivation of adenine: a semiclassical dynamics study

A realistic dynamics simulation study is reported for the ultrafast radiationless deactivation of 9H-adenine. The simulation follows two different excitations induced by two 80 fs (fwhm) laser pulses that are different in energy: one has a photon energy of 5.0 eV, and the other has a photon energy of 4.8 eV. The simulation shows that the excited molecule decays to the electronic ground state from the (1)pipi* state in both excitations but through two different radiationless pathways: in the 5.0 eV excitation, the decay channel involves the out-of-plane vibration of the amino group, whereas in the 4.8 eV excitation, the decay strongly associates with the deformation of the pyrimidine at the C 2 atom. The lifetime of the (1) npi* state determined in the simulation study is 630 fs for the 5.0 eV excitation and 1120 fs for the 4.8 eV excitation. These are consistent with the experimental values of 750 and 1000 fs. We conclude that the experimentally observed difference in the lifetime of the (1) npi* state at various excitations results from the different radiationless deactivation pathways of the excited molecule to the electronic ground state.     

Laser-operated chiral molecular switch: quantum simulations for the controlled transformation between achiral and chiral atropisomers

We report quantum dynamical simulations for the laser controlled isomerization of 1-(2-cis-fluoroethenyl)-2-fluorobenzene based on one-dimensional electronic ground and excited state potentials obtained from (TD)DFT calculations. 1-(2-cis-fluoroethenyl)-2-fluorobenzene supports two chiral and one achiral atropisomers, the latter being the most stable isomer at room temperature. Using a linearly polarized IR laser pulse the molecule is excited to an internal rotation around its chiral axis, i.e. around the C-C single bond between phenyl ring and ethenyl group, changing the molecular chirality. A second linearly polarized laser pulse stops the torsion to prepare the desired enantiomeric form of the molecule. This laser control allows the selective switching between the achiral and either the left- or right-handed form of the molecule. Once the chirality is "switched on" linearly polarized UV laser pulses allow the selective change of the chirality using the electronic excited state as intermediate state.     

Quenching of highly vibrationally excited pyrimidine by collisions with CO2

Relaxation of highly vibrationally excited pyrimidine (C(4)N(2)H(4)) by collisions with carbon dioxide has been investigated using diode laser transient absorption spectroscopy. Vibrationally hot pyrimidine (E(')=40 635 cm(-1)) was prepared by 248-nm excimer laser excitation, followed by rapid radiationless relaxation to the ground electronic state. The nascent rotational population distribution (J=58-80) of the 00(0)0 ground state of CO(2) resulting from collisions with hot pyrimidine was probed at short times following the excimer laser pulse. Doppler spectroscopy was used to measure the CO(2) recoil velocity distribution for J=58-80 of the 00(0)0 state. Rate constants and probabilities for collisions populating these CO(2) rotational states were determined. The measured energy transfer probabilities, indexed by final bath state, were resorted as a function of DeltaE to create the energy transfer distribution function, P(E,E(')), from E(')-E approximately 1300-7000 cm(-1). P(E,E(')) is fitted to a single exponential and a biexponential function to determine the average energy transferred in a single collision between pyrimidine and CO(2) and parameters that can be compared to previously studied systems using this technique, pyrazineCO(2), C(6)F(6)CO(2), and methylpyrazineCO(2). P(E,E(')) parameters for these four systems are also compared to various molecular properties of the donor molecules. Finally, P(E,E(')) is analyzed in the context of two models, one which suggests that the shape of P(E,E(')) is primarily determined by the low-frequency out-of-plane donor vibrational modes and one which suggests that the shape of P(E,E(')) can be determined by how the donor molecule final density of states changes with DeltaE.     

Investigation of intramolecular sulfur-nitro interactions in 2-(2′-pyridylthio)-3-nitropyridine by 13C-NMR spectroscopy and x-ray crystallography

The single crystal X-ray diffraction structure of 2-(2′-pyridylthio)-3-nitropyridine is reported. A non-bonded interaction was observed between the sulfur atom and one of the oxygen atoms of the nitro group with an interatomic distance of 2.678 A. Examination of the molecule's behavior in solution by ¹³C-nmr spin-lattice (T₁) relaxation measurements showed the non-nitro bearing pyridyl ring to reorient anisotropically about the C2′-C5′ bond axis. In contrast, the nitro substituted pyridine ring did not appear to exhibit anisotropic reorientation about the corresponding C2-C5 bond axis. Rather, approximately equivalent relaxation times were noted for all protonated ring carbons, indicating that the relaxations of this portion of the molecule were governed by the overall isotropic reorientation of the system. Based on these observations, it was concluded that the intramolecular sulfur-nitro interaction also operates in the solution state and is sufficiently strong to prevent free rotation of the substituted portion of the molecule about the C2-S bond axis.     

Structural and solvent dependence of superexciplex

In this paper, we show that a few coumarin dye solutions exhibit dual amplified spontaneous emission (ASE) spectra under pulsed laser excitation, though all these solutions exhibit only one fluorescence band under steady-state conditions. The anomalous band, appearing only in ASE spectra, had been attributed to the superexciplex--a new molecular species. This is made of two excited molecules and is obtainable only under pulsed laser excitation. This complex is different from the well known excimer or exciplex, wherein only one atom or molecule is in the excited state. The superexciplex is possible with the two polar excited molecules coming together to form an excited state association, with the solvent acting as some sort of bridge. With very polar dye molecules, such an association is possible even with the inert benzene acting as a bridge; otherwise solvents like ethyl acetate, with an oxygen atom, is necessary for the linkage.     

Direct observation of excimer formation in anthracene and 9,9′-bianthryl

The existence of anthracene excimer in fluid solution was confirmed for the first time by observing the coincidence of the rise time of excimer fluorescence with the decay time of monomer fluorescence with the use of a picosecond laser, a streak camera, and a computer. The continuum model of diffusion theory is found to be applicable to the excimer formation and the encounter distance between anthracene in the excited state and that in the ground state is calculated to be 8 ± 2 Å. The anomalously broad featureless fluorescence observed for 9,9′-bianthryl in glycerol-methanol (9:1) solution was found to be emitted from the species formed only in the excited state and its rise time was found to be coincident with the decay time of fluorescence from anthracene moiety composing 9,9′-bianthryl, α,ω-9,9′-bianthrylpropane, -butane, -hexane, and -dodecane were found not to form excimer in the excited state.