6-溴代呋喃[2,3-d]嘧啶双环核苷的合成新方法研究

6-溴代呋喃[2,3-d]嘧啶双环核苷是合成具有显著抗病毒活性的呋喃并嘧啶双环核苷衍生物的重要中间体.该类化合物的文献制备方法合成步骤多,并需使用钯配合物作催化剂.以易得的5-甲酰基嘧啶核苷为原料,先经与四溴化碳缩合得5-(2,2-二溴乙烯基)嘧啶核苷类似物,然后在碘化亚铜催化下发生环化反应生成目标产物,不仅缩短了合成路线,而且避免了贵金属试剂的使用,是一种经济实用的新方法.     

碳核苷类似物的合成与生物活性

利用杂环金属盐法,通过呋喃碳核苷中间体,合成了哒嗪、哒嗪酮等碳核苷,讨论了反应机理;提高了呋喃汞盐法合成碳核苷的收率及立体选择性.     

5'-脱氧-5'-氟-5-氟尿核苷的合成和性质

叙述了5'-脱氧-5'-氟尿核苷和5'-脱氧-5'-氟-5-氟尿核苷的合成, 并比较了它们以及尿核苷和5-氟尿核苷的一些性质。     

复分解反应在核苷类似物合成中的应用

核苷类似物可以参与并干扰细菌（病毒）的DNA或RNA过程,抑制其生长和繁殖,从而有希望发展为抗肿瘤抗病毒药物。一些天然的核苷化合物虽然表现出一定的生理活性,在体内缺乏酶稳定性和靶向选择性却限制了其在医药领域的应用,合成具有生物活性的化学修饰的核苷及其衍生物是核酸药物化学中的重要课题。一类在金属卡宾复合物催化下的分子内或分子间烯烃重组反应-----复分解反应的发展使核苷类似物的合成进入了新阶段, 烯烃复分解反应成为核苷类似物合成的主要途径之一。随着施洛克催化剂、格拉布催化剂等复分解反应催化剂的发现和不断改进,烯烃复分解反应,尤其是关环复分解和交叉复分解反应被广泛应用于构建核苷类似物的糖环(或伪糖)结构或连接核苷类似物单体而形成核苷多聚物。本文对烯烃复分解反应在核苷类似物包括碳环核苷,2’,3’-双脱氧核苷,无环核苷,多环核苷及核苷二聚体或三聚体的合成中的应用进行了综述。     

碳环核苷的合成研究进展

碳环核苷是一类结构特殊且具有多种生物活性, 其中特别是抗病毒活性的核苷衍生物. 目前, 碳环核苷的合成及生物活性筛选已成为新药研究领域的热点之一. 综述了近年来各类碳环核苷的合成研究进展, 并对不同合成路线作了简要分析和评论.     

从核糖核苷合成2′,3′-不饱和核苷的研究进展

综述了从核糖核苷合成2′，3′－不饱和核苷及其类似物的方法，主要包括2′，3′－溴代乙酰酰氧基同时脱除法、2′，3′－O－甲烷基次甲基核苷脱除法、2′，3′－O－硫酸酯脱除法、2′，3′－O－甲烷磺酸酯脱除法等6种方法。引用文献23篇。     

以核酸为作用靶的内源性活性物质的研究

(Sp)-8-Cl-cAMP-辛酯通过调节细胞信号传导系统而抑制肿瘤细胞生长,其代谢产物8-Cl-腺苷也同样具有诱导分化和启动肿瘤细胞程序死亡的作用。从D(L)-木糖、D-葡萄糖和2-氨基-2-脱氧-D-葡萄糖出发合成了五种不同形式的异核苷,由异核苷组成的反义寡核苷酸能有效拮抗磷酸二酯酶的降解,它们对互补序列的杂交能力与异核苷的结构及磷酸二酯键的连接方式密切相关。     

尿核苷和腺核苷的2''位烯丙基化反应

利用以钯为催化剂的脱羧基化反应, 烯丙基被引入尿核苷和腺核苷的2'位直接得到四异丙基二硅氧烷基团和苯基团的保护。     

离子液体中核苷类似物的化学合成

核苷类似物因其显著的抗病毒、抗肿瘤活性,已作为化疗药物在临床上得到了广泛应用.核苷类似物的高效绿色合成是有机化学和药物化学领域的重要课题.本文对近年来离子液体介质中的核苷改造进行了综述,主要包括羟基和氨基的保护、糖基的改造、碱基的改造、糖基与碱基的耦合和寡核苷酸的合成.离子液体作为一类物理化学性能"可设计"的绿色软介质...     

近年碳环核苷类似物的合成研究进展

碳环核苷是呋喃糖环部分被碳环基团取代的核苷类似物.作为天然核苷的类似物,许多碳环核苷具有良好的抗病毒、抗肿瘤活性.同时,由于不存在典型的糖苷键,碳环核苷较天然核苷对于磷酸化酶和水解酶具有更高的代谢稳定性.因此,对碳环核苷类似物进行设计与合成,并筛选出安全有效的抗病毒试剂成为近年来药物化学家们研究的重点.按照碱基种类的不同综述了近5年来碳环核苷的合成研究进展,分为嘌呤类碳环核苷、嘧啶类碳环核苷以及碳环C-核苷等三部分,重点介绍了嘌呤类碳环核苷的合成研究,并对碳环核苷未来的研究趋势进行了展望.     

Synthesis and Evaluation of Some Uracil Nucleosides as Promising Anti-Herpes Simplex Virus 1 Agents

Since herpes simplex virus type 1 (HSV-1) infection is so widespread, several antiviral drugs have been developed to treat it, among which are uracil nucleosides. However, there are major problems with the current medications such as severe side-effects and drug resistance. Here we present some newly synthesized cyclic and acyclic uracil nucleosides that showed very promising activity against HSV-1 compared to acyclovir.     

Synthesis of Disaccharide Nucleosides by the O‐Glycosylation of Natural Nucleosides with Thioglycoside Donors

Disaccharide nucleosides constitute an important group of naturally‐occurring sugar derivatives. In this study, we report on the synthesis of disaccharide nucleosides by the direct O‐glycosylation of nucleoside acceptors, such as adenosine, guanosine, thymidine, and cytidine, with glycosyl donors. Among the glycosyl donors tested, thioglycosides were found to give the corresponding disaccharide nucleosides in moderate to high chemical yields with the above nucleoside acceptors using p‐toluenesulfenyl chloride (TolSCl) and silver triflate (AgOTf) as promoters. The interaction of these promoters with nucleoside acceptors was examined by ¹H NMR spectroscopic experiments.     

Mass spectrometric identification of modified urinary nucleosides used as potential biomedical markers by LC–ITMS coupling

In diseases accompanied by strong metabolic disorders, like cancer and AIDS, modifying enzymes are up- or down-regulated. As a result, many different types of metabolic end-products, including abnormal amounts of modified nucleosides, are found in urine. These nucleosides are degradation products of an impaired ribonucleic acid (RNA) metabolism, which affects the nucleoside pattern in urine. In several basic experiments we elucidated the fragmentation pathways of 16 characteristic nucleosides and six corresponding nucleic bases that occur in urine using electrospray ionization ion trap MS⁵ (ESI-ITMS) experiments operated in positive ionization mode. For urinary nucleoside analysis, we developed an auto-LC–MS³ method based on prepurification via boronate gel affinity chromatography followed by reversed phase chromatography. For this purpose, an endcapped LiChroCART Superspher RP 18 column with a gradient of ammonium formate and a methanol–water mixture was used. This method gives a limit of detection of between 0.1 and 9.6 pmol for 15 standard nucleosides, depending on the basicity of the nucleoside. Overall, the detection of 36 nucleosides from urine was feasible. It was shown that this auto-LC–MS³ method is a valuable tool for assigning nucleosides from complex biological matrices, and it may be utilized in the diagnosis of diseases associated with disorders in RNA metabolism.     

Direct determination of nucleosides in the urine of patients with breast cancer using column-switching liquid chromatography-tandem mass spectrometry

We developed an analytical method for a simple, sensitive and simultaneous determination of oxidized nucleosides in urine using column-switching liquid chromatography-electrospray/tandem mass spectrometry (LC-ESI/MS/MS). We connected two columns through a six-way switching valve and effectively separated nucleosides in the urine from the interference by column-switching liquid chromatography. We monitored separated nucleosides using positive ionization tandem mass spectrometry in selective reaction monitoring (SRM) mode. The calibration ranges of nucleosides were 0.2-100 nmol/mL. The linearity of the method was 0.994-0.999, and the limits-of-detection (LOD) at a signal-to-noise (S/N) ratio of 3 were 0.1-0.2 nmol/mL. The coefficients of variation were in the range 2.28-11.74% for within-day variation and 4.36-11.15% for day-to-day variation, respectively. To explore the relationship between breast cancer and the nucleosides level in human urine, we measured the concentrations of nucleosides in female patients with breast cancer (n = 30) and in normal female subjects (n = 30). The concentration of nucleosides was significantly increased in patients with breast cancer when compared with the normal controls (1-methyladenosine; p < 0.005, N(2),N(2)-dimethylguanosine; p < 0.01, 5-hydroxymethyl-2'-deoxyuridine; p < 0.001, 8-hydroxy-2-deoxyguanosine; p < 0.001). Therefore, the elevated levels of nucleosides could be used as an important biomarker for breast-cancer research.     

Analysis and evaluation of nucleosides,nucleobases, and amino acids in safflower from different regions based on ultra high performance liquid chromatography coupled with triple‐quadrupole linear ion‐trap tandem mass spectrometry

Safflower has both medicinal and edible values but research on its nutrient composition is still lacking. This study was established for the quantitative determination of 28 nucleosides, nucleobases, and amino acids based on the ultra‐performance liquid chromatography coupled with triple‐quadrupole linear ion‐trap tandem mass spectrometry. Analysis of 30 batches of safflower from different producing areas indicated that the contents of l ‐proline, l ‐asparagine, l (+)‐arginine, l ‐serine, l ‐histidine, uracil, guanosine, and uridine was high in safflower. Principle component analysis and cluster analysis found that samples from different regions could be distinguished well, and samples from the same area could be clustered into one class, different geographical environments may cause the differences of nucleosides, nucleobases, and amino acids in safflower. The analysis of principal component analysis, cluster analysis, and counter propagation artificial neural network show similar results. Then the content of nucleosides, nucleobases, and essential amino acids were compared, and found that the content in safflower from Gansu was higher than those from other regions, and there was a little difference between the samples from Xinjiang, Sichuan, and Yunnan. This research revealed the composition of nucleosides, nucleobases, and amino acids in safflower, and provided a theoretical basis for utilization of safflower.     

Synthesis and evaluation of hexitol nucleoside congeners as ambiguous nucleosides

A series of anhydrohexitol nucleoside congeners was synthesized as ambiguous or so-called universal nucleosides and was evaluated for their hybridization potential and discrimination properties. The 1,5-anhydro-2,3-dideoxy-2-(5-nitroindazol-1-yl)-d-arabino-hexitol 4e showed the lower spread in T_m values upon hybridization to the natural bases, with minimal destabilization, and therefore behaved as a true ambiguous nucleoside.     

Dehalogenation of Halogenated Nucleobases and Nucleosides by Organoselenium Compounds

Halogenated nucleosides, such as 5-iodo-2′-deoxyuridine and 5-iodo-2′-deoxycytidine, are incorporated into the DNA of replicating cells to facilitate DNA single-strand breaks and intra- or interstrand crosslinks upon UV irradiation. In this work, it is shown that the naphthyl-based organoselenium compounds can mediate the dehalogenation of halogenated pyrimidine-based nucleosides, such as 5-X-2′-deoxyuridine and 5-X-2′-deoxycytidine (X=Br or I). The rate of deiodination was found to be significantly higher than that of the debromination for both nucleosides. Furthermore, the deiodination of iodo-cytidines was found to be faster than that of iodo-uridines. The initial rates of the deiodinations of 5-iodocytosine and 5-iodouracil indicated that the nature of the sugar moiety influences the kinetics of the deiodination. For both the nucleobases and nucleosides, the deiodination and debromination reactions follow a halogen-bond-mediated and addition/elimination pathway, respectively.     

A new protecting group for the exocyclic amino groups of nucleosides

A new protecting group has been developed for the exocyclic amino groups of nucleosides that occur in DNA. 3-Phenyl-[{N-(2-trimethylsilyl-ethoxycarbonyl)-2-amino}]-propanoic acid used as the protective agent.     

Solvent- and environment-dependent fluorescence of modified nucleobases

Fluorescent nucleosides with modified nucleobases are useful tools for detecting nucleic acids and probing their structures and functions. Nucleobases are suitable for modification because 1) intrinsically light-absorbing nucleobases can be converted to fluorescent chromophores by simple chemical modification, 2) attaching substituents to nucleobases at appropriately selected positions does not inhibit base pairing or duplex formation, and 3) duplex formation and protein interactions affect the environment of nucleobases, causing changes in their fluorescence intensities and/or wavelengths. This review summarizes recent fluorescent nucleosides and their photophysical properties, such as absorption wavelength, emission wavelength, and fluorescence quantum yield together with their solvent dependency.     

Selenium‐Mediated Dehalogenation of Halogenated Nucleosides and its Relevance to the DNA Repair Pathway

Halogenated nucleosides can be incorporated into the newly synthesized DNA of replicating cells and therefore are commonly used in the detection of proliferating cells in living tissues. Dehalogenation of these modified nucleosides is one of the key pathways involved in DNA repair mediated by the uracil‐DNA glycosylase. Herein, we report the first example of a selenium‐mediated dehalogenation of halogenated nucleosides. We also show that the mechanism for the debromination is remarkably different from that of deiodination and that the presence of a ribose or deoxyribose moiety in the nucleosides facilitates the deiodination. The results described herein should help in understanding the metabolism of halogenated nucleosides in DNA and RNA.