Mechanism and optimisation of the homoboroproline bifunctional catalytic asymmetric aldol reaction: Lewis acid tuning through in situ esterification

The use of homoboroproline as a bifunctional catalyst in the asymmetric aldol reaction has been investigated mechanistically, particularly with respect to tuning the Lewis acidity of boron by in situ esterification with mildly sigma-electron withdrawing diols such as hydrobenzoin and tartrate esters. The stability of simple cyclohexyl and cyclopentyl boronate diol esters shows that the 5-ring boronate esters are more stable, which sheds light on the mode of action of esterified homoboroproline catalyst in the enamine-mediated aldol reaction, which is also studied by NMR. The result is reaction optimisation to provide an efficient aldol reaction and a proposed mechanistic proposal.     

Biomimetic monoacylation of diols in water. Lanthanide-promoted reactions of methyl benzoyl phosphate

The direct monoacylation of diols by acyl phosphate monoesters in water is a biomimetic analogy to the enzymic aminoacylation of tRNA by aminoacyl adenylates. Without catalysis, acyl phosphate monoesters react rapidly with amines but very slowly with water and alcohols. Lanthanide ions dramatically and selectively facilitate the base-catalyzed monoacylation of diols in water by methyl benzoyl phosphate (MBP), a typical acyl phosphate monoester, in neutral solutions where reactive amines are protonated and unreactive. The reaction patterns and reactivity of various diols with MBP in the presence of lanthanides are consistent with a mechanism that involves internal addition from the conjugate base of the bis-bidentate complex of the lanthanide with the diol and MBP. The method is also applicable to reactions of nucleosides as evidenced by the selective monoacylation of the 2'- or 3'-hydroxyl group of adenosine, without reaction of the 5'-hydroxyl group or the 6-amino group. Analogues of adenosine without the diol are unreactive. This suggests that the method will selectively monoacylate the hydroxyl groups at the unique diol in tRNA that forms the 3'-terminus.     

Dynamic-covalent macromolecular stars with boronic ester linkages

Macromolecular stars containing reversible boronic ester linkages were prepared by an arm-first approach by reacting well-defined boronic acid-containing block copolymers with multifunctional 1,2/1,3-diols. Homopolymers of 3-acrylamidophenylboronic acid (APBA) formed macroscopic dynamic-covalent networks when cross-linked with multifunctional diols. On the other hand, adding the diol cross-linkers to block copolymers of poly(N,N-dimethylacrylamide (PDMA))-b-poly(APBA) led to nanosized multiarm stars with boronic ester cores and PDMA coronas. The assembly of the stars under a variety of conditions was considered. The dynamic-covalent nature of the boronic ester cross-links allowed the stars to reconfigure their covalent structure in the presence of monofunctional diols that competed for bonding with the boronic acid component. Therefore, the stars could be induced to dissociate via competitive exchange reactions. The star formation-dissociation process was shown to be repeatable over multiple cycles.     

1H NMR spectra of alkane‐1,3‐diols in benzene: GIAO/DFT shift calculations

The proton nuclear magnetic resonance (NMR) spectra of propane‐1,3‐diol, 2‐methylpropane‐1,3‐diol, 2,2‐dimethylpropane‐1,3‐diol, butane‐1,3‐diol, 3‐methylbutane‐1,3‐diol, pentane‐2,4‐diols (dl and meso), 2‐methylpentane‐2,4‐diol and cyclohexane‐1,3‐diols (cis and trans) in benzene have been analysed. The conformer distribution and the NMR shifts of these diols have been computed on the basis of density functional theory, the solvent being included by means of the integral equation formalism phase continuum model (IEFPCM) implemented in Gaussian 09. Relative Gibbs energies of all conformers are calculated at the Perdew, Burke and Ernzerhof (PBE)0/6‐311 + G(d,p) level, and NMR shifts by the gauge‐including atomic orbital method with the PBE0/6‐311 + G(d,p) geometry and the cc‐pVTZ basis set. Vicinal coupling constants for 1,2‐ and 1,3‐diols are rationalised in terms of relative conformer populations and geometries. The NMR shifts of hydrogen‐bonded protons in individual conformers of alkane‐1,n‐diols show a very rough correlation with the OH?OH distances. The computed overall NMR shifts for CH protons in 1,2‐ and 1,3‐diols are systematically high but correlate very well with the experimental values, with a gradient of 1.07 ± 0.01. Some values for nonequivalent methylene protons in 1,3‐diols are reversed, calculation giving enhanced values for the proton anti to the C? OH bonds. Errors in the NMR shifts computed for the OH protons of nonsymmetrical diols appear to be related to relative populations of conformers where one or other of the OH groups is the donor. Some results based on the second‐order Møller–Plesset approach, the Becke three‐parameter Lee‐Yang‐Parr method and on the IEFPCM solvation model implemented in Gaussian 03 are included. Copyright © 2013 John Wiley & Sons, Ltd.     

Asymmetric Synthesis of Bicyclic Diol Derivatives through Metal and Enzyme Catalysis: Application to the Formal Synthesis of Sertraline

Enzyme‐ and ruthenium‐catalyzed dynamic kinetic asymmetric transformation (DYKAT) of bicyclic diols to their diacetates was highly enantio‐ and diastereoselective to give the corresponding diacetates in high yield with high enantioselectivity (99.9 % ee). The enantiomerically pure diols are accessible by simple hydrolysis (NaOH, MeOH), but an alternative enzyme‐catalyzed ester cleavage was also used to give the trans‐diol (R,R)‐ 1 b in extremely high diastereomeric purity (trans/cis=99.9:0.1, >99.9 % ee). It was demonstrated that the diols can be selectively oxidized to the ketoalcohols in a ruthenium‐catalyzed Oppenauer‐type reaction. A formal enantioselective synthesis of sertraline from a simple racemic cis/trans diol 1 b was demonstrated.     

New approach to the synthesis of 1,3-dioxolanes

Application of ethanol to the synthesis of 1,3-dioxolanes by the condensation of carbonyl compounds with vicinal diols results in a high yield of the reaction product and considerably reduces the duration of the process. It is assumed that the effect of the ethanol is caused by the adduct formation with carbonyl compounds (hemiacetals) which behave as active intermediates of the condensation. A cyclic ketal of acetone with glycerol obtained with the help of ethanol was used as a basis component in the synthesis of a series of ketals substituting diol or carbonyl components by transketalyzation mechanism proceeding without water liberation.     

Boronate affinity adsorption of cis‐diol‐containing biomolecules in nonaqueous solvent

Boronate affinity has attracted much attention in recent years. It has been broadly used for selective isolation and enrichment of cis‐diol‐containing molecules. Conventionally, the cis‐diols are adsorbed in mild alkaline aqueous solutions. In this work, for the first time, we found that boronate affinity adsorption could also be performed in nonaqueous solvent at nonbasic pH. Cis‐diol‐containing compounds present in herbal medicines were used for the adsorption test. The results indicated that all compounds obtained higher recoveries in the organic solvents (methanol, acetonitrile, ethyl acetate) compared with alkaline buffer. The adsorption of vicinal cis‐diol‐containing molecules in organic solvents could be accomplished rapidly, with high selectivity and high recoveries (>80%). These results shed light on the possibility of boronate affinity adsorption in nonaqueous solvents. The results are very important for the isolation and enrichment of cis‐diols, which have poor solubility in water, especially for those in herbal medicines. Copyright © 2015 John Wiley & Sons, Ltd.     

Synthesis and Thermal Properties of Biodegradable Poly(ester‐urethane)s Based on Chemo‐Synthetic Poly[(R,S)‐3‐hydroxybutyrate]

A series of telechelic oligo[(R,S)‐3‐hydroxybutyrate]‐diols (PHB‐diols) was synthesized from ethyl (R,S)‐3‐hydroxybutyrate (ethyl (HB)) and four different aliphatic diols, namely, 1,4‐butanediol, 1,6‐hexanediol, 1,8‐octanediol and 1,10‐decanediol by transesterification and condensation in bulk. The structures of the synthesized oligomers were confirmed by ¹H NMR spectroscopy and MALDI‐TOF mass spectroscopy. The use of 1,4‐butanediol results in an oligoester with hydroxyl functionality of approximately 2. In the case of the higher aliphatic diols, the number average functionalities were found to be lower than 2. These differences were ascribed to side reactions which occur during polymerization, yielding unreactive end groups. Other novel families of biodegradable poly(ester‐urethane)s were synthesized either from PHB‐diol alone, or PHB‐diol mixed with poly(ε‐caprolactone)‐diol (PCL‐diol), poly(butylene adipate)‐diol (PBA‐diol) or poly(diethylene glycol adipate)‐diol (PDEGA‐diol). In each case, 1,6‐hexamethylene diisocyanate was used as a nontoxic connecting agent. The homopolymers prepared from PCL‐diol, PBA‐diol and PDEGA‐diol were also synthesized for the sake of comparison. All the prepared copolymers possess high molecular weight with glass transition temperature (T_g) values varying from –54 to –23°C. Some of the prepared copoly(ester‐urethane)s are partially crystalline with melting temperatures (T_m's) varying from 37 to 56°C.     

Transition-state effects in acid-catalyzed aryl epoxide hydrolyses

The hydronium ion-catalyzed hydrolyses of 5-methoxyindene 1,2-oxide and of 6-methoxy-1,2,3,4-tetrohydronaphthalene-1,2-epoxide were each found to yield 75-80% of cis diol and only 20-25% of trans diol as hydrolysis products. The relative stabilities of the cis and trans diols in each system were determined by treating either cis or trans diols with perchloric acid in water solutions and following the approach to an equilibrium cis/trans mixture as a function of time. These studies establish that the trans diol in each system is more stable than the corresponding cis diol. Thus, acid-catalyzed hydrolysis of each epoxide, which proceeds via a carbocation intermediate, yields the less stable cis diol as the major product. Transition-state effects, presumably of a hydrogen-bonding nature, selectively stabilize the transition state for attack of water on the intermediate 2-hydroxy-1-indanyl carbocation leading to the less stable cis diol in this system. Transition-state effects must also be responsible for formation of the less stable cis diol as the major product in the acid-catalyzed hydrolysis of 5-methoxy-1,2,3,4-tetrahydronaphthalene 1,2-epoxide. However, in this system steric effects at the transition state may be more important than hydrogen bonding in determining the cis/trans diol product ratio. The synthesis of 5-methoxyindene 1,2-oxide and a study of its rate of reaction as a function of pH in water and dioxane-water solutions are reported. Both an acid-catalyzed reaction leading to only diol products and a pH-independent reaction yielding 71% of 5-methoxy-2-indanone and 29% of diols are observed; the half-life of its pH-independent reaction in water is only 2.4 s.     

Synthesis and Mechanism of a Main‐Chain Chiral Polymer Based on Asymmetric Cyclopolymerization

A systematic study of the asymmetric cyclocopolymerization of bis(4‐vinylbenzoate)s, derived from chiral diols, with styrene has been made from the viewpoint of synthesizing the main‐chain chiral polymer. On the basis of using over 30 chiral diols as templates, we summarize the relationship between the structure of the chiral template and the chiroptical properties of the template‐free polymer. For simple chiral diols, the chirality induction efficiency increased in the order 1,2‐diol < 1,4‐diol < 1,3‐diol. Chiral diols with two chiral centers exhibited higher chirality induction efficiency than those having one chiral center only. The chirality induction efficiency for cyclic 1,2‐diols increased with the ring size in the order 5‐ < 6‐ < 7‐ < 8‐membered rings, and that for acyclic 1,2‐diols increased with the bulkiness of the substituent at the chiral center. In addition, a chirality induction mechanism has been proposed on the basis of model radical cyclization experiments and computational studies. Chirality induction could be caused by the inhibition of the formation of one racemo unit among the four stereoisomers due to the strong dependence of the stereoselectivity in intermolecular additions on the absolute configuration of the cyclized radical. The mechanism was examined using the Lewis‐acid and monomer‐concentration effects.     

Acceleration effect of five‐membered cyclic dithiocarbonate on an epoxy–amine curing system

A bifunctional cyclic five‐membered dithiocarbonate (DTC), having a bisphenol A structure, was found to be an effective accelerator for a epoxy–amine curing system comprised of bisphenol A diglycidyl ether and amine‐terminated polypropylene glycol. The acceleration effect was evaluated by monitoring the time‐dependence of the storage modulus of the reaction mixture with a dynamic mechanical analyzer. The reactions involved in the curing system were investigated in detail by performing a series of model reactions using the corresponding monofunctional monomers. This investigation revealed that (1) DTC reacted with amine rapidly, (2) the reaction afforded the corresponding adduct having a thiourethane and thiol moieties, and (3) the thiol reacted rapidly with epoxide. The thiourethane moiety incorporated into the resulting adduct effectively catalyzed the reaction of epoxide and amine, and this catalysis was the predominant mechanism for the acceleration effect arisen by the addition of DTC. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 4606–4611, 2007     

1H NMR spectra of butane‐1,4‐diol and other 1,4‐diols: DFT calculation of shifts and coupling constants

The proton nuclear magnetic resonance (NMR) spectra of butane‐1,4‐diol, pentane‐1,4‐diol, (S,S)‐hexane‐2,5‐diol, 2,5‐dimethylhexane‐2,5‐diol and cyclohexane‐1,4‐diols (cis and trans) in benzene and some other solvents have been analysed. The conformer distribution and the NMR shifts of these diols in benzene have been computed on the basis of the density functional theory, the solvent being included by means of the integral‐equation‐formalism polarizable continuum model implemented in Gaussian 09. Relative Gibbs energies of all conformers are calculated at the Perdew, Burke and Ernzerhof (PBE)0/6‐311+G(d,p) level and NMR shifts by the gauge‐including atomic orbital method with the PBE0/6‐311+G(d,p) geometry and the cc‐pVTZ basis set. Vicinal three‐bond coupling constants for the acyclic diols are calculated from the relative conformer populations, the geometries and generalized Karplus equations developed by Altona's group; these correlate well with the experimental values. The solvent dependence of coupling constants for butane‐1,4‐diol is attributed to conformational change. Coupling constants for the rigid cyclohexane‐1,4‐diols do not change with solvent and are readily explained in terms of their geometries. The NMR shifts of hydrogen‐bonded protons in individual conformers of alkane‐1,n‐diols show a very rough correlation with the OH···OH distances. The computed overall NMR shifts for CH protons in 1,2‐diols, 1,3‐diols and 1,4‐diols are systematically high but correlate very well with the experimental values, with a gradient of 1.07 ± 0.01; those for OH protons correlate less well. Copyright © 2014 John Wiley & Sons, Ltd.     

Fate of the Oxygen Atoms in the Diol‐Dehydratase‐Catalyzed Dehydration of meso‐Butane‐2,3‐diol

¹⁸O‐Substituted propane‐1,2‐diols and meso‐butane‐1,2‐diols were synthesized and fed to growing cells of Lactobacillus brevis. Propan‐1‐ol and butan‐2‐ol, prepared from such diols through diol‐dehydratase‐catalyzed dehydration followed by intracellular reduction, were analyzed for their ¹⁸O‐content. For each propane‐1,2‐diol enantiomer, partial retention or complete loss of the isotope appeared to be related to the mode of substrate binding. Specific retention of the O‐atom linked to the (R)‐configured C‐atom of meso‐butane‐1,2‐diol indicates that the diol dehydratase handles this substrate like (R)‐propane‐1,2‐diol.     

Synthesis and properties of some new polyazomethine-urethanes

Two new bisazomethine diols were prepared from terephthalaldehyde and aromatic or aliphatic aminoalcohols. The structure of the diols with bisazomethine moieties was confirmed by ¹H-NMR, IR, UV spectroscopy and elemental analysis. Bisazomethine aliphatic diol exhibited a smectic phase that has been identified by means of polarizing microscopy and differential scanning calorimetry. By using these diols as partners in polyaddition reaction between poly(tetramethylene oxide)diol of 2000 average molecular weight, tolylene-2,4-diisocyanate (as 2,4- and 2,6-TDI, 80:20 v/v isomers mixture) and bisazomethine diol (1:3:2 molar ratio), two polyazomethine-urethanes were synthesized. Polyazomethine-urethanes with a higher concentration of poly-Schiff's base units were also obtained by reacting the above bisazomethine diols with the same diisocyanate (1:1 molar ratio). All polymers were characterized by viscometry, elemental analysis, IR, UV, ¹H-NMR spectroscopy and TGA techniques.     

Practical and efficient multigram preparation of a camphor-derived diol for the enantioselective Lewis acid catalyzed allylboration of aldehydes

[reaction: see text] Chiral diols are important molecules with widespread use as chiral auxiliaries and ligands in enantioselective synthesis. Therefore, efficient and practical syntheses of highly dissymmetrical nonracemic diols are still a meaningful pursuit. Two new routes to access camphor-derived chiral diol 1 have been developed. One route employs camphorquinone (3) as the starting material, affording in only two steps the desired diol in 55% overall yield. The second route, from camphor (2), leads to the desired diol in an efficient four-step synthesis, with an overall yield of 55%.     

Association of symmetrical alkane diols with pyridine: DFT/GIAO calculation of 1H NMR chemical shifts

Proton nuclear magnetic resonance (NMR) shifts of the free diol and of its 1 : 1 and 1 : 2 hydrogen‐bonded complexes with pyridine have been computed for five symmetrical alkane diols on the basis of density functional theory, by applying the gauge‐including atomic orbital method to geometry‐optimized conformers. For certain conformers, intramolecular OH ···OH interactions, evidenced by high NMR OH proton shifts, are further enhanced on going from the free diol to the corresponding 1 : 1 diol/pyridine complex. This is confirmed by atoms‐in‐molecules and non‐covalent interaction plots. The computed OH and CH proton shifts for the diol and the two complexes correlate well with values obtained by analysing data from the NMR titration of the diols in benzene against pyridine. Shift values for the diols in neat pyridine are calculated by weighting the shifts of the various protons in the three forms (free diol, 1 : 1 and 1 : 2 diol/pyridine complexes) according to the experimentally determined association constants. The results are in good agreement with those observed, and after empirical scaling, the root mean square difference is 0.18 ppm. Copyright © 2016 John Wiley & Sons, Ltd.     

Molecular interpretation of water structuring and destructuring effects: hydration of alkanediols

Molecular electrostatic potential (MESP) guidelines are employed for understanding the reactivity and hydration patterns in alkanediol molecules. The deeper oxygen lone pair MESP minima indicate stronger basicity of 1,n-diols and 2,4-pentanediol (2,4-PeD) as compared to that of vicinal diols. The existence and strength of the intramolecular hydrogen bond in diols are gauged in terms of the electron density at the bond saddle points. A model named electrostatic potential for intermolecular complexation (EPIC) is used for generating the structures of hydrated complexes, which are subsequently subjected to ab initio calculations at M?ller-Plesset second-order perturbation level of theory. Further, the nature of water...water as well as diol...water interactions is appraised employing many-body energy decomposition analysis. It is seen that water...water interactions are more favorable in vicinal diol...6H(2)O than those in 1,n-diol...6H(2)O (n=3, 4, 5,...) complexes. Exactly opposite trends are shown by diol...water interaction energies. Thus vicinal diols, being more effective at strengthening water...water network, are expected to act as water structuring agents, whereas the non-vicinal diols are expected to be water destructuring agents.     

Novel Fragmentation Pathways of Anionic Adducts of Steroids Formed by Electrospray Anion Attachment Involving Regioselective Attachment, Regiospecific Decompositions, Charge-Induced Pathways, and Ion–Dipole Complex Intermediates

The analysis of several bifunctional neutral steroids, 5-α-pregnane diol (5-α-pregnane-3α-20βdiol), estradiol (3,17α-dihydroxy-1,3,5(10)-estratriene), progesterone (4-pregnene-3,20-dione), lupeol (3β-hydroxy-20(29)-lupene), pregnenolone (5-pregnen-3β-ol-20-one), and pregnenolone acetate (5-pregnen-3β-ol-20-one acetate) was accomplished by negative ion electrospray mass spectrometry (ESI-MS) employing adduct formation with various anions: fluoride, bicarbonate, acetate, and chloride. Fluoride yielded higher abundances of anionic adducts and more substantial abundances of deprotonated molecules compared with other investigated anions. Collision-induced dissociation (CID) of precursor [M?+?anion](-) adducts of these steroids revealed that fluoride adduct [M?+?F](-) precursors first lose HF to produce [M - H](-) and then undergo consecutive decompositions to yield higher abundances of structurally-informative product ions than the other tested anions. In addition to charge-remote fragmentations, the majority of CID pathways of estradiol are deduced to occur via charge-induced fragmentation. Most interestingly, certain anions exhibit preferential attachment to a specific site on these bifunctional steroid molecules, which we are calling "regioselective anion attachment." Regioselective anion attachment is evidenced by subsequent regiospecific decomposition. Regioselective attachment of fluoride (and acetate) anions to low (and moderate) acidity functional groups of pregnenolone, respectively, is demonstrated using deuterated compounds. Moreover, the formation of unique intermediate ion-dipole complexes leading to novel fragmentation pathways of fluoride adducts of pregnenolone acetate, and bicarbonate adducts of d(4)-pregnenolone, are also discussed.     

Acid-Base Interactions of Pyrazine,Ethyl Acetate,Di-alcohols,and Lysine with the cyclic Alumosiloxane (Ph2SiO)8[Al(O)OH]4 in View of Mimicking Al2O3(H2O) Surface Reactions

The etherate of (Ph₂SiO)₈[Al(O)OH]₄ can be transformed into the pyrazine adduct (Ph₂SiO)₈[Al(O)OH]₄ · 3N(C₂H₂)₂N ( 1 ), the ethyl acetate adduct (Ph₂SiO)₈[Al(O)OH]₄ · 3H₃C-C(O)OC₂H₅ ( 2 ), the 1,6-hexane diol adduct (Ph₂SiO)₈[Al(O)OH]₄ · 2HO–CH₂(CH₂)₄CH₂–OH ( 3 ) and the 1,4-cyclohexane diol adduct (Ph₂SiO)₈[Al(O)OH]₄ · 4HO–CH(CH₂CH₂)₂CH–OH ( 4 ). In all compounds the OH groups of the starting material bind to the bases through O–H ··· N ( 1 ) or O–H ··· O hydrogen bonds ( 2 , 3 , 4 ) as found from single-crystal X-ray diffraction analyses. Whereas in 1 only three of the central OH groups bind to the pyrazines, in 2 two of them bind to the same carbonyl oxygen atom of the ethyl acetate resulting in an unprecedented O–H ··· O ··· H–O double hydrogen bridge. The hexane diol adduct 3 in the crystal forms a one-dimensional coordination polymer with an intramolecularly to two OH groups grafted hexane diol loop, while the second hexane diol is connecting intermolecularly. In the cyclohexane diol adduct 4 all OH groups of the central Al₄(OH)₄ ring bind to different diols, leaving one alcohol group per diol uncoordinated. These “free” OH groups form an (O-H ··· )₄ assembly creating a three-dimensional overall structure. When reacting with (Ph₂SiO)₈[Al(O)OH]₄ lysine loses water, turns into the cyclic 3-amino-2-azepanone, and transforms through chelation of one of the aluminum atoms the starting material into a new polycycle. The isolated compound has the composition (Ph₂SiO)₁₂[Al(O)OH]₄[Al₂O₃]₂ · 4 C₆H₁₂N₂O · 6(CH₂)₄O ( 5 ).     

1H NMR spectra of ethane‐1,2‐diol and other vicinal diols in benzene: GIAO/DFT shift calculations

The proton NMR spectra of several 1,2‐diols in benzene have been analysed so as to associate each magnetically nonequivalent proton with its chemical shift. The shifts and coupling constants of the OH and methylene protons of ethane‐1,2‐diol have been determined in a wide range of solvents. The conformer distribution and the proton NMR shifts of these 1,2‐diols in benzene have been computed on the basis of density functional theory. The solvent is included using the integral–equation–formalism polarizable continuum model implemented in Gaussian 09. Relative Gibbs energies for all stable conformers are calculated at the Perdew, Burke and Enzerhof (PBE)0/6‐311 + G(d,p) level, and shifts are calculated using the gauge‐including atomic orbital method with the PBE0/6‐311 + G(d,p) geometry but using the cc‐pVTZ basis set. Previous calculations on ethane‐1,2‐diol and propane‐1,2‐diol have been corrected and extended. New calculations on tert‐butylethane‐1,2‐diol, phenylethane‐1,2‐diol, butane‐2,3‐diols (dl and meso) and cyclohexane‐1,2‐diols (cis and trans) are presented. Overall, the computed NMR shifts are in good agreement with experimental values for the OH protons but remain systematically high for CH protons. Some results based on the Gaussian 03 solvation model are included for comparison. Copyright © 2012 John Wiley & Sons, Ltd.