低分子量聚酯的13C NMR研究

本文对由己二酸、邻苯二甲酸、乙二醇、二甘醇和1、4-丁二醇形成的几种不同组成和分子量的低分子量聚酯进行了¹³C NMR研究。应用模型化合物^[1],经验公式^[2]和实验方法相结合,对5种不同组成和分子量的低分子量聚酯的¹³C NMR图谱进行了全归属;利用PRFT和反门控去偶技术测定了有关碳原子的自旋晶格弛豫时间(T₁)范围和NOE因子;在此基础上选择了最佳实验条件,测得了各样品的数均分子量,所得结果与端基分析法测得的结果非常接近。表明¹³C NMR不仅可以用于结构分析,选择合适的条件还可得到令人满意的定量结果。     

丙硅乳液的核磁共振研究

单介绍了²⁹Si NMR实验技术;用²⁹Si NMR测定了丙硅乳液原料羟基硅氧烷的平均聚合度、平均分子量、平均羟基含量;用¹³C NMR分析了丙硅乳液的结构组成。     

19F NMR技术在蛋白质研究中的应用

因为¹⁹F核自身的特性,如自旋为1/2;丰度高(100%),具有与¹H相当的灵敏度;化学位移分布广且对环境敏感;绝大部分生物体内都不含¹⁹F因而无背景干扰等;¹⁹F NMR自诞生以来就成为非常有吸引力的研究手段. 现在,¹⁹F NMR已被广泛用于核磁共振成像、药物化学及生物大分子的研究,各个方面均有较多的相关文献综述. 该综述将集中讨论¹⁹F NMR在蛋白质研究中的应用,包括蛋白质¹⁹F标记方法,¹⁹F NMR在蛋白质结构、 动力学、蛋白质折叠、蛋白质与药物的相互作用及In-cell NMR中的应用.     

新药硫酸头孢匹罗的NMR研究

应用1D NMR、2D NMR （COSY、HMQC、HMBC、NOESY）及脉冲梯度场2D NMR技术[gHSQC（¹H-¹⁵N）、gHMBC（¹H-¹⁵N）]深入研究了第四代新型超广谱头孢菌素类抗生素硫酸头孢匹罗的结构,并首次对其¹H NMR、¹³C NMR谱和¹⁵N NMR谱的信号进行了全归属,通过NOESY实验对其立体结构提供有力依据.     

无谱峰畸变的定量13C DEPT++谱研究

具有定量特征的极化转移¹³C NMR 因检测灵敏度和分辨率高而常用于有机物的NMR 定量分析,比如Q-DEPT、Q-DEPT⁺等．但是,DEPT 检测本身存在相位和多重峰畸变问题,可能造成复杂样品的定量测定困难．由于DEPT++技术能够有效地消除上述畸变,该文尝试将Q-DEPT⁺方法的定量技术扩展到DEPT⁺⁺中,以消除谱峰畸变对于定量的影响．首先,利用积算符对DEPT⁺⁺的极化转移机制进行了系统理论分析,结果发现目前标准仪器和文献中关于DEPT⁺⁺可观测算符的表达式中存在符号错误,实验结果进一步证实了我们的猜测;进而采用Q-DEPT⁺技术中所采用的多极化转移时间和读出脉冲技术,将DEPT⁺⁺用于定量测定．结果表明所建立的Q-DEPT⁺⁺方法能够有效地消除谱畸变问题．     

通过高斯加权的1H CPMG弛豫曲线测定橡胶交联密度

CPMG（Carr-Purcell-Meiboom-Gill）回波法是测量橡胶交联密度[常用交联点之间的分子量（M_c）表示]的一种常用核磁共振（NMR）技术,但实验发现通过该技术获得的M_c对于CPMG序列中脉冲间隔时间具有较强的依赖性,导致交联密度NMR测量值与橡胶材料硬度的相关性低.为了克服这一缺点,本文对不同脉冲间隔时间下CPMG实验测得的质子横向驰豫曲线进行高斯加权.通过对高斯加权求和后的质子横向驰豫曲线进行处理分析,实现了对橡胶交联密度更加准确地测量,大幅提升了天然橡胶交联密度NMR测量值与材料硬度的相关性.本文方案测量能获得与¹H DQ NMR方法相当,或比之更佳的交联密度-硬度相关性.同时,本文方案比¹H DQ NMR方法更为高效,整体测量时间缩短为¹H DQ NMR实验时间的1/10.     

一些X-字型V-Cu-S簇合物的NMR研究

我们测定了四个结构新颖的V-Cu-S簇合物的¹H,¹³C,⁵¹V NMR谱.结果表明;在这些异金属簇合物中,存在着Cu⁺的d电子向V⁵⁺的空的d轨道的电子转移,从而加宽了配体R₂NCS₂的¹H NMR谱线;在溶液中存在着配体交换反应的化学平衡.     

新药炎琥宁的碳氢NMR信号全归属

炎琥宁为中药提取物穿心莲内酯经结构改造后获得的一个抗菌、抗病毒新药,本文应用1D NMR和脉冲梯度场2D NMR实验技术（gCOSY,gHSQC,gHSQC-TOCOSY,gHMBC）对其结构进行了研究,并首次对其¹H NMR、¹³C NMR谱信号进行了全归属.     

基于自主研发的500 MHz NMR谱仪的紫杉醇结构解析

中国科学院武汉物理与数学研究所（WIPM）于2010年成功研制了500 MHz（WIPM-I 500）高分辨超导核磁共振（NMR）谱仪,并将其投入实际应用中.然而,关于其二维核磁共振（2D NMR）谱图的准确性及在此基础上对复杂物质的结构解析尚无系统完整的数据报道.该文利用WIPM-I 500型NMR谱仪,对紫杉醇样品进行了1D NMR及2D NMR（包括¹H-¹H COSY、¹H-¹H TOCSY、J-Res、¹H-¹³C HMQC和¹H-¹³C HMBC）实验,将谱图分析结果与进口仪器进行了对比.结果表明：利用WIPM-I 500型NMR谱仪能够采集准确的2D NMR谱图,为紫杉醇的正确归属提供了实验基础;而且该文也纠正了文献中对紫杉醇的错误归属.     

一种新型的莪术醇衍生物的波谱学分析

莪术醇进行环外双键断裂氧化和酸催化氧桥开环加成2步反应后,经硅胶柱层析分离,得到一种新型的莪术醇衍生物（2）. 应用1D NMR和2D NMR测试了化合物2的¹H NMR、¹³C NMR、¹H-¹H COSY、gHSQC、gHMBC,对化合物2的¹H和¹³C化学位移进行了全归属,结合其红外光谱和质谱,推得化合物2为8-羟基-12-异丙基-2-甲基-三环[6.2.2.0^1,5]十二烷-10-氧杂-6,9-二酮,并比较了莪术醇,莪术醇双键断裂氧化产物(化合物1),化合物2的¹H NMR、¹³C NMR数据变化.     

Optimization of Three-Dimensional TROSY-Type HCCH NMR Correlation of Aromatic H–C Groups in Proteins

Improved methods for three-dimensional TROSY-Type HCCH correlation involving protons of negligible CSA are presented. The TROSY approach differs from the conventional approach of heteronuclear decoupling in evolution and detection periods by not mixing fast and slowly relaxing coherences and usually suppressing the former. Pervushin et al. (J. Am. Chem. Soc. 120, 6394–6400 (1998)) have proposed a 3D TROSY-type HCCH experiment where the TROSY approach is applied only in one of the ¹³C dimensions. A new pulse sequence applying the TROSY approach in both indirect dimensions is advantageous when the TROSY effect of the carbons is large or when a relatively high resolution is required. For lower resolutions or moderate TROSY effects we show that it is possible to combine the best of both worlds, namely to suppress heteronuclear couplings without mixing fast and slowly relaxing coherences while at the same time superimpose the two components and thus have both contribute to the detected signal. That is possible using the novel technique of Spin-State-Selective Time-Proportional Phase Incrementation (S³ TPPI). The new 3D S³ TPPI TROSY HCCH method is demonstrated on a ¹³C,¹⁵N-labeled protein sample, RAP 18–112 (N-terminal domain of α₂-macroglobulin receptor associated protein), at 750 MHz and average sensitivity enhancements of 10% are obtained for the cross peaks in comparison to methods based on conventional decoupling on one of the carbons or on TROSY on both carbons.     

TROSY of side-chain amides in large proteins

By using the mixed solvent of 50% H₂O/50% D₂O and employing deuterium decoupling, TROSY experiments exclusively detect NMR signals from semideuterated isotopomers of carboxamide groups with high sensitivities for proteins with molecular weights up to 80 kDa. This isotopomer-selective strategy extends TROSY experiments from exclusively detecting backbone to both backbone and side-chain amides, particularly in large proteins. Because of differences in both TROSY effect and dynamics between ¹⁵N–H^E{D^Z} and ¹⁵N–H^Z{D^E} isotopomers of the same carboxamide, the ¹⁵N transverse magnetization of the latter relaxes significantly faster than that of the former, which provides a direct and reliable stereospecific distinction between the two configurations. The TROSY effects on the ¹⁵N–H^E{D^Z} isotopomers of side-chain amides are as significant as on backbone amides.     

蛋白质顺磁标记技术与生物核磁共振中的赝接触位移

未配对电子与蛋白质分子自旋核的作用能提供丰富的长程结构信息,这些顺磁信息通常可用顺磁弛豫增强、赝接触位移和残余偶极耦合描述,其中赝接触位移包含生物大分子内重要的距离和角度信息.稀土离子具有相似的配位化学性质和不同的顺磁物理特性,而大多稀土离子具有磁各向异性,在与大分子作用过程中会产生赝接触位移.由于大多数蛋白质没有顺磁中心,获得这些顺磁信息需要通过定点选择标记蛋白质来实现.该文旨在对近年来蛋白质顺磁标记的方法和进展进行介绍,在顺磁标记基础上阐述赝接触位移在结构生物学中的应用.     

Optimization of three-dimensional TROSY-type HCCH NMR correlation of aromatic (1)H-(13)C groups in proteins.

Improved methods for three-dimensional TROSY-Type HCCH correlation involving protons of negligible CSA are presented. The TROSY approach differs from the conventional approach of heteronuclear decoupling in evolution and detection periods by not mixing fast and slowly relaxing coherences and usually suppressing the former. Pervushin et al. (J. Am. Chem. Soc. 120, 6394-6400 (1998)) have proposed a 3D TROSY-type HCCH experiment where the TROSY approach is applied only in one of the (13)C dimensions. A new pulse sequence applying the TROSY approach in both indirect dimensions is advantageous when the TROSY effect of the carbons is large or when a relatively high resolution is required. For lower resolutions or moderate TROSY effects we show that it is possible to combine the best of both worlds, namely to suppress heteronuclear couplings without mixing fast and slowly relaxing coherences while at the same time superimpose the two components and thus have both contribute to the detected signal. That is possible using the novel technique of Spin-State-Selective Time-Proportional Phase Incrementation (S(3) TPPI). The new 3D S(3) TPPI TROSY HCCH method is demonstrated on a (13)C,(15)N-labeled protein sample, RAP 18-112 (N-terminal domain of alpha(2)-macroglobulin receptor associated protein), at 750 MHz and average sensitivity enhancements of 10% are obtained for the cross peaks in comparison to methods based on conventional decoupling on one of the carbons or on TROSY on both carbons.     

JE-TROSY: combined J- and TROSY-spectroscopy for the measurement of one-bond couplings in macromolecules

With the application of RDCs in high-resolution NMR studies of macromolecules, there has been an interest in the development of accurate, sensitive methods for measuring 15N-1H and 13C-1H one-bond coupling constants. Most methods for determining these couplings are based on the measurement of the displacement between cross-peak components in J-coupled spectra. However, for large macromolecules and macromolecular complexes, these methods are often unreliable since differential relaxation can significantly broaden one of the multiplet components (i.e., the anti-TROSY component) and thereby make accurate determination of its position difficult. To overcome this problem, a J-evolved transverse relaxation optimized (JE-TROSY) method is presented for the determination of one-bond couplings that involves J-evolution of the sharpest cross-peak multiplet component selected in a TROSY experiment. Couplings are measured from the displacement of the TROSY component in the additional J-evolution dimension relative to a zero frequency origin. The JE-TROSY method is demonstrated on uniformly labeled 15N, 13C-labeled RNA and peptide samples, as well as with an RNA-protein complex, in which the protein is uniformly 15N, 13C-labeled. In all cases, resolved, sensitive spectra are obtained from which heteronuclear one-bond J-couplings could be accurately and easily measured.     

NOE和二维NMR技术在倍半萜化学位移归属中的应用

本文用NOE和二维核磁共振技术-COSY,C-H化学位移相关,C-H远程化学位移相关(COLOC),DEPT对二个倍半萜分子的立体化学结构进行了研究,并对其¹H和¹³C化学位移进行了归属。     

Clean TROSY: compensation for relaxation-induced artifacts

TROSY pulse sequences for recording, e.g., (1)H-(15)N chemical shift correlation spectra of proteins are designed to select only one of four two-dimensional multiplet components. However, all of the variants published so far are prone to relaxation-induced artifacts at the positions of two of the other multiplet components. This article introduces modifications to the two spin-state-selective coherence transfer building blocks of the TROSY mixing sequence resulting in a clean TROSY spectrum with the artifacts largely suppressed. It works by having the new mixing sequence generate peaks of opposite phase at the positions of the relaxation artifacts. The clean TROSY pulse sequence is marginally shorter than the original one and contains the same pulses. Experimental demonstration is presented for the (15)N-labeled proteins RAP 17-97 (N-terminal domain of alpha(2)-macroglobulin receptor associated protein) and EQT, equinatoxin II, from the Mediterranean anemone Actinia equina.     

Suppression of diagonal peaks in three-dimensional protein NMR TROSY-type HCCH correlation experiments

A novel method for suppression of (13)C-(13)C diagonal peaks without sensitivity loss in three-dimensional HCCH TROSY-type NMR correlation experiments involving aromatic side chains in proteins (Pervushin et al., J. Am. Chem. Soc. 120, 6394-6400 (1998)) is presented. The key element is a spin-state-selective filter in the (13)C-(13)C mixing sequence with the dual effect of selecting the TROSY resonance in the preceding evolution period and interchanging TROSY and anti-TROSY resonances. The cross peaks are invariant to this filter but diagonal peak coherence gets concentrated on the anti-TROSY transition so that it can be eliminated by a (13)C --> (1)H TROSY transfer element. The new method is demonstrated using a (13)C,(15)N-labeled protein sample, RAP 18-112 (N-terminal domain of alpha(2)-macroglobulin receptor associated protein), at 750 MHz.     

Molecular-orientation analysis based on alignment-induced TROSY chemical shift changes

We present a new NMR technique for determining the alignment tensor of a weakly aligned protein using only alignment-induced ¹⁵N transverse relaxation optimized spectroscopy (TROSY) chemical shift changes. Alignment-induced TROSY chemical shift changes reflect the combined contributions from two different anisotropic spin interactions including the residual dipolar couplings (RDCs) and the residual chemical shift anisotropy effects (RCSAs). We show here that these two residual anisotropic spin interactions’ values, encoded in the TROSY chemical shift changes, can be used to determine a weakly aligned protein’s alignment tensor. To prove the significance of this method, we show that our TROSY-based analysis gives the consistent alignment angles with those determined using RDCs for ¹⁵N-labeled ubiquitin (8.6 kDa) in an aligned medium, within an uncertainty range estimated by considering experimental and structural noises, being 5° at most. Because our approach requires a pre-determined ¹⁵N CSA tensor value, we also estimated the uncertainties associated with the resultant alignment tensor values caused by variation in ¹⁵N CSA tensors. In spite of the significant variations in literature-reported ¹⁵N CSA tensors, they gave consistent orientation angles within an uncertainty range. These results ensure that our TROSY-based approach is a useful alternative to the RDC-based method to determine the alignment angles especially for large proteins in a weakly aligned state.     

核磁共振新技术国际研讨会论文摘要集（英文）

Structural genomics and proteomics were born from the understanding that functions of a protein are dictated by its 3D structure and dynamics. To understand protein functions on a genomic scale, we must know protein structures on a genomic scale. High resolution NMR can be used for this purpose. Traditional multidimensional NMR structure determination protocols become ineffective for structural genomics since to obtain a structure of a small protein of 15kD requires many months of painstaking spectral analysis and modeling. Recent advances in magnet and probe technology and in experimental methods have expanded the range of proteins amenable to structure determination and make the large scale structure determination possible. These advances are (1) effective expression systems for protein production, (2) introduction of cryoprobe, (3) structure determination with the use of the minimal amount of structural restraints obtained from the chemical shifts, residual dipolar couplings, NOEs, and computer modeling. In this talk,Iwill briefly outline these developments and related works done in our NMR lab.