Multidentate,V-Shaped Pyridine Building Blocks as Tectons for Crystal Engineering

The formation of supramolecular structural units through self-assembly is a powerful method to design new architectures and materials endowed with specific properties. With the aim of adding a group of versatile tectons to the toolkit of crystal engineers, we have devised and synthesised four new V-shaped building blocks characterised by an aryl acetylene scaffold comprising three substituted pyridine rings connected by two triple bonds. The judicious choice of different substituents on the pyridine rings provides these tectons with distinctive steric, electrostatic and self-assembly properties, which influence their crystal structures and their ability to form co-crystals. Co-crystals of the tectons with tetraiododifluorobenzene were obtained both via traditional and mechanochemical crystallisation strategies, proving their potential use in crystal engineering. The energetic contributions of the supramolecular interactions at play in the crystal lattice have also been evaluated to better understand their nature and strength and to rationalise their role in designing molecular crystals.     

From Distinct Metallopeptoids to Self-Assembled Supramolecular Architectures

The construction of synthetic protein mimics is a central goal in chemistry. A known approach for achieving this goal is the self-assembly of synthetic biomimetic sequences into supramolecular structures. Obtaining different 3D structures via a simple sequence modification, however, is still challenging. Herein we present the design and synthesis of biomimetic architectures, via the self-assembly of distinct copper-peptoid duplexes. We demonstrate that changing only one non-coordinating side-chain within the peptoids—sequence-specific N-substituted glycine oligomers—leads to different supramolecular structures. Four peptoid trimers incorporating 2,2’-bipyridine and pyridine ligands, and a non-coordinating but rather a structure-directed bulky group were synthesized, and their solutions were treated with Cu²⁺ in a 1:1 ratio. Single-crystal X-ray analysis of the products revealed the self-assembly of each peptoid into a metallopeptoid duplex, followed by the self-assembly of multiple duplexes and their packing into a three-dimensional supramolecular architecture via hydrogen bonding and π–π interactions. Tuning the non-coordinating side-chain enables to regulate both the final structure being either a tightly packed helical rod or a nano-channel, and the pore width of the nano-channels. Importantly, all the metallopeptoids structures are stable in aqueous solution as verified by cryo-TEM measurements and supported by UV/Vis and EPR spectroscopies and by ESI-MS analysis. Thus, we could also demonstrate the selective recognition abilities of the nano-channels towards glycerol.     

Design of an Amphiphilic Perylene Diimide for Optical Recognition of Anticancer Drug through a Chirality-Induced Helical Structure

Introduction of chirality into a supramolecular self-assembly system plays an indispensable role in attaining specific molecular recognition ability. Herein, a chiral anticancer drug 5′-deoxy-5-fluorouridine (5′DFU) was explored for inducing the self-assembly of a cationic perylene diimide derivative containing boronic acid groups (PDI-PBA) into a highly ordered right-handed helical structure. As a result, PDI-PBA exhibited a molecular recognition ability towards 5′DFU among other cis-diols and anticancer drugs. With the help of a dynamic covalent bond and favorable hydrogen-bonding interactions, chirality transfer from chiral 5′DFU to achiral PDI-PBA breaks down the strong π–π stacking of PDI-PBA and makes it reorganize into highly ordered helical supramolecular structures. This work provides an insight into chiral anticancer drug tuning interactions of π-chromophores and the inducement of hierarchical self-assembly to achieve specific molecular recognition.     

Mechanisms of TiO2 nanoparticle transport in porous media: role of solution chemistry, nanoparticle concentration, and flowrate

The controlled self-assembly of multi-components in one system represents the capability integrating intermolecular interactions and functions of components and is believed the key procedure leading to multifunctional materials finally. In pursuing this goal, we used a double-chain cationic surfactant with a benzoic acid group at the end of one tail to encapsulate Keggin-type polyanion clusters via electrostatic interaction, obtaining uniform supramolecular hybrid reverse micelles, which served as hydrogen-bonding donors. Five pyridine derivatives containing conjugated and non-conjugated groups were chosen as hydrogen-bonding acceptors to bind with reverse micelles. Through mixing with these components according to chemical stoichiometry, the hybrid reverse micelle changed to a new self-assembly precursor through intermolecular hydrogen bonding. The as-prepared reverse micelles bearing conjugated pyridine groups exhibit supramolecular liquid crystal properties, which were characterized by differential scanning calorimetry, polarizing optical microscopy, and X-ray diffraction. The length and number of the alky chain in the pyridine derivatives, as well as the charges of polyoxometalates were also studied with regard to the liquid crystal structure. The synergistic effect of among three components was analyzed, and the liquid crystal properties could be conveniently adjusted through the modification of the hydrogen-bonding acceptor components.     

三维宏观网络状囊泡薄膜的分级自组装研究

分别合成以疏水性超支化聚醚(HBPO)为核,以亲水性聚环氧乙烷(EO)和聚甲基丙烯酸N,N-二甲氨基乙酯(DMAEMA)为臂的两亲性超支化多臂共聚物HBPO-star-PEO和HBPO-star-PDMAEMA.通过两者在水溶液中的复合自组装制备得到具有pH响应性的巨型聚合物囊泡(1~10μm),并用zeta电位仪,激光共聚焦显微镜及光学显微镜对囊泡的自组装行为进行了研究.结果表明,在等电点以前,复合囊泡始终以单个囊泡形式存在;随着溶液pH的升高,囊泡逐步线型缔合成串珠结构;在更高的pH下,囊泡进一步二次聚集形成具有宏观尺度的三维蜘蛛网状超分子结构,这是一类新的自组装体.     

Supramolecular electronics; nanowires from self-assembled pi-conjugated systems

The conditions required for supramolecular electronics, e.g. nano-sized optoelectronic devices, will be illustrated on the basis of the programmed self-assembly of pi-conjugated systems into individual nanosized wires. Using the supramolecular design rules nanowires can be created from almost any polymeric and oligomeric pi-conjugated system. In the case of oligomers it is even possible to construct individual wires having a uniform diameter of one molecule thickness. The construction of wires on a substrate is possible by self-assembly in solution or during the deposition. The transfer of the supramolecular stacks from solution to a solid support is a very delicate process. A comprehensive knowledge of all intermolecular interactions gives rise to controlled transfer of pi-conjugated assemblies to specific surfaces. There are a large number of very appealing targets that should be reached before supramolecular electronics can serve as an attractive alternative in between single molecule electronics and bulk devices. Nevertheless, the combination of exciting scientific results and intriguing technological challenges creates an interesting future for supramolecular electronics.     

Functional, hierarchically structured poly(diacetylene)s via supramolecular self-assembly

The supramolecular self-assembly of macromonomers may serve as a first step to prepare well-defined, highly functionalized, hierarchically structured, conjugated polymers. Functional diacetylene macromonomers equipped with an oligopeptide segment designed to promote self-assembly into parallel beta-sheet type structures and a polydisperse, aliphatic coil segment to prevent global ordering give rise to supramolecular polymers with a tubular double-helical quarternary structure in organic solution. These supramolecular polymers may then be converted into the corresponding poly(diacetylene)s by UV irradiation under retention of their hierarchical structure.     

The structure of interlocked helical supramolecule formed by the self-assembly of mono-6-(4-cyano-phenyl)-β-cyclodextrin

The supramolecular self-assembly formed by newly synthesized mono-6-(4-cyano-phenyl)-β-cyclodextrin through the molecular interpenetration has been investigated and compared in both solution and the solid state, which was characterized by X-ray crystallography, fourier transform infrared spectroscopy, NMR spectroscopy and atomic force microscopy. The crystal structure clearly revealed that the benzonitrile group is consecutively inserted into the adjacent cyclodextrin cavity from the second side, thus giving rise to an unusual interlocked helical supramolecular self-assembly in which the benzonitrile group acts as bridge between the cyclodextrin units. As compared with crystal, the conformation in aqueous solution indicates that the benzonitrile group prefer to be self-assembled included into another cavity from the second side of cyclodextrin to form the self-assembly.     

Circular dichroism and UV-Vis absorption spectroscopic monitoring of production of chiral silver nanoparticles templated by guanosine 5'-monophosphate

Herein we report the chemical reduction of silver ions incorporated into chiral supramolecular nanostructures by NaBH(4) in buffered (basic) and unbuffered conditions. In situ self-assembly of guanosine 5'-monophosphate (5'-GMP) templated by Ag(I) and generation of silver nanoparticles (NPs) were continuously monitored by CD and UV-Vis spectroscopy measurements. 5'-GMP has been identified as an efficient chiral organic ligand to complex silver ions into a hierarchical helical nanostructure and is a useful capping agent for stabilizing silver NPs with a size diameter lower than 20 nm. The observation of opposite signed bands in the CD spectra of Ag(I)/5'-GMP complexes at different pH has suggested the existence of opposite-handed supramolecular helical structures depending on pH. Both helical supramolecular structures induce chirality in the silver NPs during their growth of the same handedness as shown by the CD signals in the plasmon resonance band.     

Molecular-Recognition-Directed Self-Assembly of Pleated Sheets from 2-Aminopyrimidine Hydrogen-Bonding Motifs

The self-assembly of the 2,2′-diamino-5,5′-(dialkylmethylidene)methylenedipyrimidine derivatives 3a – c allows for the molecular-recognition-directed generation of pleated sheets as revealed by X-ray crystallographic analysis. The data provide insight into the interplay of the different structural and interactional features of the molecular components in the generation of the supramolecular assembly. The introduction of the adamantylidene group as in 3c leads to the dominance of the H-bonding factor and the resulting formation of a regular, fully interconnected array of pleated sheet type. The results suggest further manipulation of the interplay of the different factors to induce the self-assembly of other supramolecular architectures.     

N.Br halogen bonding: one-dimensional infinite chains through the self-assembly of dibromotetrafluorobenzenes with dipyridyl derivatives

The N.Br halogen bonding drives the self-assembly of 1,4-dibromotetrafluorobenzene (1 a) and its 1,3 or 1,2 analogues (1 b,c, respectively) with dipyridyl derivatives 2 a,b. The isomeric supramolecular architectures 3 a-f are obtained as cocrystals that are stable in the air at room temperature. The solid-state features of these 1D infinite chains 3 have been fully characterized by single-crystal X-ray, Raman, and IR analyses. The occurrence of N.Br halogen bonding in solution has been detected with (19)F NMR spectroscopy. The N.Br halogen bonding is highly selective and directional and the geometry of the single strands of noncovalent copolymers 3 is programmed by the geometry of halogen-bonding donor and acceptor sites on the starting modules. The composition and topology of the instructed networks can be predicted with great accuracy. Experiments of competitive cocrystal formation established the strength of the N.Br interaction relative to other halogen bondings and the ability of different modules 1 to be involved in site-selective supramolecular syntheses.     

Self-assembly of oligo(para-phenylenevinylene)s through arene-perfluoroarene interactions: pi gels with longitudinally controlled fiber growth and supramolecular exciplex-mediated enhanced emission

The arene-perfluoroarene (ArH-ArF) interaction, which has been extensively studied in the field of solid-state chemistry, is exploited in the hierarchical self-assembly of oligo(para-phenylenevinylene)s (OPVs) with controlled longitudinal fiber growth that leads to gelation. The size of the self-assembled fibers of a pentafluorophenyl-functionalized OPV 5 could be controlled through C-FH--C hydrogen bonding and pi stacking. The ability of fluoroaromatic compounds to form excited-state complexes with aromatic amines has been utilized to form a supramolecular exciplex, exclusively in the gel state, that exhibits enhanced emission. Thus, the commonly encountered fluorescence quenching during the self-assembly of OPVs could be considerably prevented by exciplex formation with N,N-dimethylaniline (DMA), which only occurred for the fluorinated OPV and not for the non-fluorinated analogue 4. In the former case, a threefold enhancement in the emission intensity could be observed in the gel state, whereas no change in emission occurred in solution. Thus, the major limitations of spontaneous fiber growth and fluorescence self-quenching encountered in the self-assembly of OPVs could be controlled to a great extent by using the versatile ArH-ArF interaction.     

Recurrence of carboxylic acid-pyridine supramolecular synthon in the crystal structures of some pyrazinecarboxylic acids.

X-ray crystal structures of pyrazinic acid 1 and isomeric methylpyrazine carboxylic acids 2-4 are analyzed to examine the occurrence of carboxylic acid-pyridine supramolecular synthon V in these heterocyclic acids. Synthon V, assembled by (carboxyl)O-H...N(pyridine) and (pyridine)C-H...O(carbonyl) hydrogen bonds, controls self-assembly in the crystal structures of pyridine and pyrazine monocarboxylic acids. The recurrence of acid-pyridine heterodimer V compared to the more common acid-acid homodimer I in the crystal structures of pyridine and pyrazine monocarboxylic acids is explained by energy computations in the RHF 6-31G* basis set. Both the O-H.N and the C-H...O hydrogen bonds in synthon V result from activated acidic donor and basic acceptor atoms in 1-4. Pyrazine 2,3- and 2,5-dicarboxylic acids 10 and 11 crystallize as dihydrates with a (carboxyl)O-H...O(water) hydrogen bond in synthon VII, a recurring pattern in the diacid structures. In summary, the carboxylic acid group forms an O-H...N hydrogen bond in pyrazine monocarboxylic acids and an O-H...O hydrogen bond in pyrazine dicarboxylic acids. This structural analysis correlates molecular features with supramolecular synthons in pyridine and pyrazine carboxylic acids for future crystal engineering strategies.     

A Nanoporous Supramolecular Metal–Organic Framework Based on a Nucleotide: Interplay of the π···π Interactions Directing Assembly and Geometric Matching of Aromatic Tails

Self-assembly is the most powerful force for creating ordered supramolecular architectures from simple components under mild conditions. π···π stacking interactions have been widely explored in modern supramolecular chemistry as an attractive reversible noncovalent tool for the nondestructive fabrication of materials for different applications. Here, we report on the self-assembly of cytidine 5’-monophosphate (CMP) nucleotide and copper metal ions for the preparation of a rare nanoporous supramolecular metal-organic framework in water. π···π stacking interactions involving the aromatic groups of the ancillary 2,2’-bipyridine (bipy) ligands drive the self-assemblies of hexameric pseudo-amphiphilic [Cu6(bipy)6(CMP)2(µ-O)Br4]²⁺ units. Owing to the supramolecular geometric matching between the aromatic tails, a nanoporous crystalline phase with hydrophobic and hydrophilic chiral pores of 1.2 and 0.8 nanometers, respectively, was successfully synthesized. The encoded chiral information, contained on the enantiopure building blocks, is transferred to the final supramolecular structure, assembled in the very unusual topology 8T6. These kinds of materials, owing to chiral channels with chiral active sites from ribose moieties, where the enantioselective recognition can occur, are, in principle, good candidates to carry out efficient separation of enantiomers, better than traditional inorganic and organic porous materials.     

A systems approach to controlling supramolecular architecture and emergent solution properties via host-guest complexation in water

The assembly behavior of aryl/alkyl imidazolium ionic liquid salts in aqueous solution has been investigated. These salts undergo self-assembly into one-dimensional stacks via hydrophobic and π-π interactions upon increasing concentration, which led to a substantial increase in the solution viscosity in water. Addition of the macrocyclic host molecules cucurbit[n]urils (CB[n]) were found to effectively alter the supramolecular assemblies, as evidenced from the dramatic increase (by CB[7]) and decrease (by CB[8]) in solution viscosity and aggregation size in water, on account of the different binding stoichiometries, 1:1 complexation with CB[7] and 2:1 complexation with CB[8]. Furthermore, the aggregate architectures were controllably modified by competitive guests for the CB[n] hosts. This complex supramolecular systems approach has tremendous implications in the fields of molecular sensor design, nonlinear viscosity modification, and controlled release of target molecules from a defined supramolecular scaffold in water.     

对称四甲基六元瓜环与2-苄基咪唑啉盐酸盐自组装包合物的晶体结构

以2-苄基-咪唑啉盐酸盐(Benid)为客体,对称四甲基六元瓜环(TMeQ[6])为主体,在水溶液中形成自组装包合物(TMeQ[6]-Benid)的晶体.X-射线单晶衍射实验表明,Benid-TMeQ[6]为单斜晶系,空间群P21,晶胞参数:a=1.18633(5) nm,b=2.06145(6) nm,c=1.35163(5) nm,α=90.00°,β=96.102(2)°,γ=90.00°,V=3.28676 nm3,Z=2,Mr=1626.95,Dc=1.569 g·cm-3,μ=0.169 mm-1,R1=0.0739,Wr2=0.1412.通过多种非共价键弱相互作用,主客体以1:1的包结比形成自组装包合物,客体的苯环被包结在主体的空腔内.1H NMR结果进一步证实了在溶液中也是同样的包结模式,包结稳定常数为7.23×105 mol-1·L.     

Self-assembly of an alkylated guanosine derivative into ordered supramolecular nanoribbons in solution and on solid surfaces

We report on the synthesis and self-assembly of a guanosine derivative bearing an alkyloxy side group under different environmental conditions. This derivative was found to spontaneously form ordered supramolecular nanoribbons in which the individual nucleobases are interacting through H-bonds. In toluene and chloroform solutions the formation of gel-like liquid-crystalline phases was observed. Sub-molecularly resolved scanning tunneling microscopic imaging of monolayers physisorbed at the graphite-solution interface revealed highly ordered two-dimensional networks. The recorded intramolecular contrast can be ascribed to the electronic properties of the different moieties composing the molecule, as proven by quantum-chemical calculations. This self-assembly behavior is in excellent agreement with that of 5'-O-acylated guanosines, which are also characterized by a self-assembled motif of guanosines that resembles parallel ribbons. Therefore, for guanosine derivatives (without sterically demanding groups on the guanine base) the formation of supramolecular nanoribbons in solution, in the solid state, and on flat surfaces is universal. This result is truly important in view of the electronic properties of these supramolecular anisotropic architectures and thus for potential applications in the fields of nano- and opto-electronics.     

Counterion-dependent proton-driven self-assembly of linear supramolecular oligomers based on amino-calix[5]arene building blocks

Self-assembly of a calix[5]arene bearing a 12-aminododecyl pendant group on the lower rim into supramolecular oligomers through intermolecular iterative inclusion events is readily triggered by contact with acid solutions and is reversed to the amino monomer precursor by treatment with a base. 1H NMR data are consistent with the formation of head-to-tail assemblies derived from endo-cavity inclusion of the alkylammonium moiety. Diffusion NMR and light-scattering studies provide evidence for the presence of oligomers in solution and show that different counterions and concentrations result in different oligomer sizes, whereas ESI-MS and SEM investigations, respectively, indicate that self-assembly also takes place in the gas phase and in the solid state. The growth of these supramolecular oligomers is concentration-dependent; however, as a consequence of the saline nature of the monomer, it also shows a distinct counterion-dependence owing to ion-pairing/solvation effects.     

Crystal assembly based on 3,5-bis(2′-benzimidazole) pyridine and its complexes

Imdazole, pyridine and their derivatives have been considered as excellent ligands in supramolecular self-assembly. In this paper, a ligand molecule 3,5-bis (2′-benzimidazole) pyridine (BBP) was prepared, and two different crystal architectures based on the ligand molecule were self-assembled by diffusion/solvothermal ways. Furthermore, several crystal architectures of several relative complexes were also successfully assembled. These crystal structures were well defined by X-ray diffractions. Structural resolutions indicated that, as building blocks, this bibenzimidazole pyridine molecules exhibited coordination varieties in constructing the crystal architectures based on its related complexes.     

刚棒-线团分子的自组装研究进展

超分子化学领域的自组装研究是近年来研究的热点,对这种由一种或多种结构单元自发聚集而成具有一定尺寸和结构的过程研究已经取得了重大进展。以亲水基团和亲脂基团为主要构成单元的两亲性分子在自组装领域中的表现优异于其他分子,其亲水的刚性棒状基团和疏水的柔性线团基团通过不同方法共同构成了各种类型的刚柔两亲性分子,而在水溶液中自组装而成不同结构与性能的聚集体又与两亲性分子的结构密切相关。目前,已报道的调控超分子自组装的方法大致可以分为两类,即外部刺激法和自身修复法,本文亦从这两个方面总结了近年来刚棒-线团分子自组装的研究进展。