Clustering coefficient and community structure of bipartite networks

Many real-world networks display natural bipartite structure, where the basic cycle is a square. In this paper, with the similar consideration of standard clustering coefficient in binary networks, a definition of the clustering coefficient for bipartite networks based on the fraction of squares is proposed. In order to detect community structures in bipartite networks, two different edge clustering coefficients LC₄ and LC₃ of bipartite networks are defined, which are based on squares and triples respectively. With the algorithm of cutting the edge with the least clustering coefficient, communities in artificial and real world networks are identified. The results reveal that investigating bipartite networks based on the original structure can show the detailed properties that is helpful to get deep understanding about the networks.     

What is the difference of research collaboration network under different projections: Topological measurement and analysis

Research collaboration network is a typical bipartite network that consists of papers and authors. This bipartite network could be transformed into one-mode networks by projection. In this paper, we used three different projections to construct three co-authorship networks. Topological features of three co-authorship networks are measured and analyzed in order to understand the influence of projections on network features. The measurement results show that different projections could lead to different topological features. Therefore, to reflect the existing reality more precisely, projection method is suggested to be considered when we investigate the structure of scientific collaborations and/or assess the status, impact and influence of researchers and their institutions.     

The Swiss board directors network in 2009

We study the networks formed by the directors of the most important Swiss boards and the boards themselves for the year 2009. The networks are obtained by projection from the original bipartite graph. We highlight a number of important statistical features of those networks such as degree distribution, weight distribution, and several centrality measures as well as their interrelationships. While similar statistics were already known for other board systems, and are comparable here, we have extended the study with a careful investigation of director and board centrality, a k-core analysis, and a simulation of the speed of information propagation and its relationships with the topological aspects of the network such as clustering and link weight and betweenness. The overall picture that emerges is one in which the topological structure of the Swiss board and director networks has evolved in such a way that special actors and links between actors play a fundamental role in the flow of information among distant parts of the network. This is shown in particular by the centrality measures and by the simulation of a simple epidemic process on the directors network.     

Ant colony clustering with fitness perception and pheromone diffusion for community detection in complex networks

Community structure detection in complex networks has been intensively investigated in recent years. In this paper, we propose an adaptive approach based on ant colony clustering to discover communities in a complex network. The focus of the method is the clustering process of an ant colony in a virtual grid, where each ant represents a node in the complex network. During the ant colony search, the method uses a new fitness function to percept local environment and employs a pheromone diffusion model as a global information feedback mechanism to realize information exchange among ants. A significant advantage of our method is that the locations in the grid environment and the connections of the complex network structure are simultaneously taken into account in ants moving. Experimental results on computer-generated and real-world networks show the capability of our method to successfully detect community structures.     

On the degree distribution of projected networks mapped from bipartite networks

Many real-world systems can be represented by bipartite networks. In a bipartite network, the nodes are divided into two disjoint sets, and the edges connect nodes that belong to different sets. Given a bipartite network (i.e. two-mode network) it is possible to construct two projected networks (i.e. one-mode networks) where each one is composed of only one set of nodes. While network analyses have focused on unipartite networks, considerably less attention has been paid to the analytical study of bipartite networks. Here, we analytically derive simple mathematical relationships that predict degree distributions of the projected networks by only knowing the structure of the original bipartite network. These analytical results are confirmed by computational simulations using artificial and real-world bipartite networks from a variety of biological and social systems. These findings offer in our view new insights into the structure of real-world bipartite networks.     

Detecting Communities by Revised Max-flow Method in Networks

A ubiquitous phenomenon in networks is the presence of communities within which the network connections are dense and between which they are sparser. This paper proposes a max-flow algorithm in bipartite networks to detect communities in general networks. Firstly, we construct a bipartite network in accordance with a general network and derive a revised max-flow problem in order to uncover the community structure. Then we present a local heuristic algorithm to find the optimal solution of the revised max-flow problem. This method is applied to a variety of real-world and artificial complex networks, and the partition results confirm its effectiveness and accuracy.     

Detecting Communities by Revised Max-flow Method in Networks

A ubiquitous phenomenon in networks is the presence of communities within which the network connections are dense and between which they are sparser.This paper proposes a max-flow algorithm in bipartite networks to detect communities in general networks.Firstly,we construct a bipartite network in accordance with a general network and derive a revised max-flow problem in order to uncover the community structure.Then we present a local heuristic algorithm to find the optimal solution of the revised max-flow problem.This method is applied to a variety of real-world and artificial complex networks,and the partition results confirm its effectiveness and accuracy.     

Detecting local community structures in complex networks based on local degree central nodes

Detecting local communities in real-world graphs such as large social networks, web graphs, and biological networks has received a great deal of attention because obtaining complete information from a large network is still difficult and unrealistic nowadays. In this paper, we define the term local degree central node whose degree is greater than or equal to the degree of its neighbor nodes. A new method based on the local degree central node to detect the local community is proposed. In our method, the local community is not discovered from the given starting node, but from the local degree central node that is associated with the given starting node. Experiments show that the local central nodes are key nodes of communities in complex networks and the local communities detected by our method have high accuracy. Our algorithm can discover local communities accurately for more nodes and is an effective method to explore community structures of large networks.     

Finding communities in weighted networks through synchronization

Community detection in weighted networks is an important challenge. In this paper, we introduce a local weight ratio scheme for identifying the community structures of weighted networks within the context of the Kuramoto model by taking into account weights of links. The proposed scheme takes full advantage of the information of the link density among vertices and the closeness of relations between each vertex and its neighbors. By means of this scheme, we explore the connection between community structures and dynamic time scales of synchronization. Moreover, we can also unravel the hierarchical structures of weighted networks with a well-defined connectivity pattern by the synchronization process. The performance of the proposed method is evaluated on both computer-generated benchmark graphs and real-world networks.     

Detecting the optimal number of communities in complex networks

To obtain the optimal number of communities is an important problem in detecting community structures. In this paper, we use the extended measurement of community detecting algorithms to find the optimal community number. Based on the normalized mutual information index, which has been used as a measure for similarity of communities, a statistic Ω(c) is proposed to detect the optimal number of communities. In general, when Ω(c) reaches its local maximum, especially the first one, the corresponding number of communities c is likely to be optimal in community detection. Moreover, the statistic Ω(c) can also measure the significance of community structures in complex networks, which has been paid more attention recently. Numerical and empirical results show that the index Ω(c) is effective in both artificial and real world networks.     

Comparison of methods for the detection of node group membership in bipartite networks

Most real-world networks considered in the literature have a modular structure. Analysis of these real-world networks often are performed under the assumption that there is only one type of node. However, social and biochemical systems are often bipartite networks, meaning that there are two exclusive sets of nodes, and that edges run exclusively between nodes belonging to different sets. Here we address the issue of module detection in bipartite networks by comparing the performance of two classes of group identification methods – modularity maximization and clique percolation – on an ensemble of modular random bipartite networks. We find that the modularity maximization methods are able to reliably detect the modular bipartite structure, and that, under some conditions, the simulated annealing method outperforms the spectral decomposition method. We also find that the clique percolation methods are not capable of reliably detecting the modular bipartite structure of the bipartite model networks considered.     

Graph kernels,hierarchical clustering,and network community structure: experiments and comparative analysis

There has been a quickly growing interest in properties of complex networks, such as the small world property, power-law degree distribution, network transitivity, and community structure, which seem to be common to many real world networks. In this study, we consider the community property which is also found in many real networks. Based on the diffusion kernels of networks, a hierarchical clustering approach is proposed to uncover the community structure of different extent of complex networks. We test the method on some networks with known community structures and find that it can detect significant community structure in these networks. Comparison with related methods shows the effectiveness of the method.     

Evolutionary games defined at the network mesoscale: the Public Goods game

The evolutionary dynamics of the Public Goods game addresses the emergence of cooperation within groups of individuals. However, the Public Goods game on large populations of interconnected individuals has been usually modeled without any knowledge about their group structure. In this paper, by focusing on collaboration networks, we show that it is possible to include the mesoscopic information about the structure of the real groups by means of a bipartite graph. We compare the results with the projected (coauthor) and the original bipartite graphs and show that cooperation is enhanced by the mesoscopic structure contained. We conclude by analyzing the influence of the size of the groups in the evolutionary success of cooperation.     

Identifying missing and spurious connections via the bi-directional diffusion on bipartite networks

Link prediction and spurious link detection in complex networks have attracted increasing attention from both physical and computer science communities, due to their wide applications in many real systems. Related previous works mainly focus on monopartite networks while these problems in bipartite networks are not yet systematically addressed. Containing two different kinds of nodes, bipartite networks are essentially different from monopartite networks, especially in node similarity calculation: the similarity between nodes of different kinds (called inter-similarity) is not well defined. In this letter, we employ the local diffusion processes to measure the inter-similarity in bipartite networks. We find that the inter-similarity is asymmetric if the diffusion is applied in different directions. Accordingly, we propose a bi-directional hybrid diffusion method which is shown to achieve higher accuracy than the existing diffusion methods in identifying missing and spurious links in bipartite networks.     

A fast and efficient heuristic algorithm for detecting community structures in complex networks

Community structure is an important property of complex networks. How to detect the communities is significant for understanding the network structure and to analyze the network properties. Many algorithms, such as K-L and GN, have been proposed to detect community structures in complex networks. According to daily experience, a community should have many nodes and connections. Based on these principles and existing researches, a fast and efficient algorithm for detecting community structures in complex networks is proposed in this paper. The key strategy of the algorithm is to mine a node with the closest relations with the community and assign it to this community. Four real-world networks are used to test the performance of the algorithm. Experimental results demonstrate that the algorithm proposed is rather efficient for detecting community structures in complex networks.     

复杂网络中社团结构发现的多分辨率密度模块度

现实中的许多复杂网络呈现出明显的模块性或社团性.模块度是衡量社团结构划分优劣的效益函数, 它也通常被用作社团结构探测的目标函数,但最为广泛使用的Newman-Girvan模块度却存在着分辨率限制问题,多分辨率模块度也不能克服误合并社团和误分裂社团同时存在的缺陷. 本文在网络密度的基础上提出了多分辨率的密度模块度函数, 通过实验和分析证实了该函数能够使社团结构的误划分率显著降低, 而且能够体现出网络社团结构是一个有机整体,不是各个社团的简单相加.     

A general evolving model for growing bipartite networks

In this Letter, we propose and study an inner evolving bipartite network model. Significantly, we prove that the degree distribution of two different kinds of nodes both obey power-law form with adjustable exponents. Furthermore, the joint degree distribution of any two nodes for bipartite networks model is calculated analytically by the mean-field method. The result displays that such bipartite networks are nearly uncorrelated networks, which is different from one-mode networks. Numerical simulations and empirical results are given to verify the theoretical results.     

Self-contained algorithms to detect communities in networks

The investigation of community structures in networks is an important issue in many domains and disciplines. In this paper we present a new class of local and fast algorithms which incorporate a quantitative definition of community. In this way the algorithms for the identification of the community structure become fully self-contained and one does not need additional non-topological information in order to evaluate the accuracy of the results. The new algorithms are tested on artificial and real-world graphs. In particular we show how the new algorithms apply to a network of scientific collaborations both in the unweighted and in the weighted version. Moreover we discuss the applicability of these algorithms to other non-social networks and we present preliminary results about the detection of community structures in networks of interacting proteins.Received: 7 November 2003, Published online: 14 May 2004PACS: 89.75.Hc Networks and genealogical trees - 87.23.Ge Dynamics of social systems - 87.90. + y Other topics in biological and medical physics     

A very fast algorithm for detecting community structures in complex networks

In this paper, a new algorithm is proposed, which uses only local information to analyze community structures in complex networks. The algorithm is based on a table that describes a network and a virtual cache similar to the cache in the computer structure. When being tested on some typical computer-generated and real-world networks, this algorithm demonstrates excellent detection results and very fast processing performance, much faster than the existing comparable algorithms of the same kind.     

Modelling of weighted evolving networks with community structures

Many social and biological networks consist of communities–groups of nodes within which links are dense but among which links are sparse. It turns out that most of these networks are best described by weighted networks, whose properties and dynamics depend not only on their structures but also on the link weights among their nodes. Recently, there are considerable interests in the study of properties as well as modelling of such networks with community structures. To our knowledge, however, no study of any weighted network model with such a community structure has been presented in the literature to date. In this paper, we propose a weighted evolving network model with a community structure. The new network model is based on the inner-community and inter-community preferential attachments and preferential strengthening mechanism. Simulation results indicate that this network model indeed reflect the intrinsic community structure, with various power-law distributions of the node degrees, link weights, and node strengths.