Supramolecular hydrogen‐bonded hexamers in two 5‐aryl‐3‐methyl‐1‐phenyl‐1,6,7,8‐tetra­hydro­pyrazolo­[3,4‐b][1,4]­diazepines

In both title compounds, i.e. 3‐methyl‐1,5‐di­phenyl‐1,6,7,8‐tetra­hydro­pyrazolo­[3,4‐b][1,4]­diazepine, C₁₉H₁₈N₄, (I), and 5‐(4‐chloro­phenyl)‐3‐methyl‐1‐phenyl‐1,6,7,8‐tetra­hydro­pyra­zolo­[3,4‐b][1,4]­diazepine, C₁₉H₁₇ClN₄, (II), an N—H?N hydrogen bond links six mol­ecules to form an R(30) ring. Compound (I) crystallizes in the R space group and (II) crystallizes in P with three mol­ecules in the asymmetric unit. The mol­ecule of (I) contains a disordered seven‐membered ring.     

rac‐(Z)‐Ethyl 2‐bromo‐2‐[(3R,5R)‐3‐bromo‐5‐methyl­tetra­hydro­furan‐2‐yl­idene]acetate

In the title compound, C₉H₁₂Br₂O₃, a (tetra­hydro­furan‐2‐yl­idene)acetate, the double bond has the Z form. In the tetra­hydro­furan group, the relative configuration of the Br atom in the 3‐position and the methyl group in the 5‐position is anti. The compound crystallizes with two independent mol­ecules per asymmetric unit and, in the crystal structure, the individual mol­ecules are linked to their symmetry‐equivalent mol­ecules by C—H⋯O hydrogen bonds, so forming centrosymmetric hydrogen‐bonded dimers.     

Two carbamoyl‐substituted di­hydro­pyrimidines: potential mimics of di­hydro­pyridine calcium channel blockers

The structures of two conformationally similar 1,4‐di­hydro­pyrimidines with a novel carbamoyl substitution, viz. 6‐methyl‐5‐(N‐methyl­carbamoyl)‐4‐phenyl‐1,2,3,4‐tetrahydro­py­rimidine‐2‐thione monohydrate, C₁₃H₁₅N₃OS·H₂O, (I), and 4‐(4‐chloro­phenyl)‐6‐methyl‐5‐(N‐methyl­carbamoyl)‐1,2,3,4‐tetra­hydro­pyrimidine‐2‐thione monohydrate, C₁₃H₁₄ClN₃OS·H₂O, (II), exhibit the structural features of 1,4‐di­hydro­pyridine calcium channel blockers. In both structures, the pyrimidine ring adopts a flattened boat conformation and the carbamoyl side chain is in an extended conformation with an anticlinal orientation. The phenyl ring occupies a pseudo‐axial position with respect to the pyrimidine ring in these structures. Both compounds crystallize with one mol­ecule of water, which participates in a two‐dimensional hydrogen‐bonding network. The mol­ecules are linked into dimers by N—H·S hydrogen bonds in both structures.     

Three tetrahydroisoquinolinedione derivatives

N‐(2‐Chloro­benzyl)‐1,2,3,4‐tetra­hydro­iso­quinoline‐1,3‐dione, C₁₆H₁₂ClNO₂, crystallizes in P2₁/n with three crystallographically independent mol­ecules in the asymmetric unit, which differ slightly in conformation, N‐(2‐bromo‐4‐methyl­phenyl)‐1,2,3,4‐tetra­hydro­iso­quinoline‐1,3‐dione, C₁₆H₁₂BrNO₂, crystallizes in P2₁/n with one mol­ecule in the asymmetric unit andN‐(2,3‐di­chloro­phenyl)‐1,2,3,4‐tetra­hydro­iso­quinoline‐1,3‐dione, C₁₅H₉Cl₂NO₂, crystallizes in P2₁/c with one mol­ecule in the asymmetric unit. In all three structures, the heterocyclic rings adopt approximately planar conformations. The pyridine rings are orthogonal to the substituted phenyl rings. In all three structures, the crystal packing is stabilized by intermolecular C—H?O hydrogen bonds.     

(1S,2R,2′S)‐ and (1S,2S,2′S)‐1‐phenyl‐2‐phenyl­thio‐2‐(tetra­hydro­pyran‐2′‐yl­thio)­ethanol diastereoisomers at 193 K

In the synthesis of 1‐phenyl‐2‐phenyl­thio‐2‐(tetra­hydro­pyran‐2‐yl­thio)­ethanol, C₁₉H₂₂O₂S₂, four diastereoisomers are formed. Two non‐centrosymmetric enantiomeric forms which crystallize in space groups P2₁2₁2₁ and Pna2₁ are presented. The former has an intramolecular hydrogen bond between the hydroxyl group and the O atom of the tetra­hydro­pyran ring. In the latter isomer, the hydroxyl group forms an intermolecular hydrogen bond to the O atom of the tetra­hydro­pyran­yl group of a neighbouring mol­ecule, joining the mol­ecules into chains in the c‐axis direction; the O?O distances are 2.962 (4) and 2.764 (3) Å, respectively. The tetra­hydro­pyran rings are in chair conformations in both isomers and the S side chain has an equatorial orientation in the former, but an axial orientation in the latter mol­ecule.     

Intermolecular interactions and ­molecular geometry in molecular complexes of N,N‐di­methyl­aniline: the 1:1 complex with 1,2,4,5‐tetra­cyano­benzene

The partner mol­ecules of N,N‐di­methyl­aniline–1,2,4,5‐tetra­cyano­benzene (1/1), C₈H₁₁N·C₁₀H₂N₄, are stacked alternately in infinite columns. The N atom of the N,N‐di­methyl­aniline mol­ecule has a partially tetrahedral character and the distance between neighbouring mol­ecules in the stack is relatively short on the side where the lone‐pair electrons of this atom are located. Molecular‐packing analysis of this and three other complexes of N,N‐di­methyl­aniline shows that there is a close relationship between the strength of the intermolecular interaction on this side and the tetrahedral character of the N atom.     

Diaquabis(1,3‐propanediamine‐κ2N,N′)nickel(II) bis(sulfanilate)

The title compound, [Ni(C₃H₁₀N₂)₂(H₂O)₂](C₆H₆NO₃S)₂, contains alternating layers of sulfanilate anions and di­aqua­bis(1,3‐propane­di­amine)­nickel(II) cations. The Ni atom lies on an inversion centre and is hexacoordinated by the 1,3‐propane­di­amine ligands, which function as N,N′‐bidentate ligands, and the water mol­ecules, which are in a trans arrangement. The sulfanilate anions are arranged in layers, with the sulfonate and amine groups directed towards opposite sides of the layer. The structure is stabilized by a network of hydrogen bonding between the O and N atoms of the sulfanilate anions, the water mol­ecules, and the N atoms of the 1,3‐propane­di­amine ligands.     

10‐(4‐Fluorophenyl)‐3,3,6,6,9‐pentamethyl‐3,4,6,7,9,10‐hexahydroacridine‐1,8(2H,5H)‐dione and 10‐(4‐fluorophenyl)‐3,3,6,6‐tetramethyl‐9‐­propyl‐3,4,6,7,9,10‐hexahydroacridine‐1,8(2H,5H)‐dione

10‐(4‐Fluoro­phenyl)‐3,3,6,6,9‐penta­methyl‐3,4,6,7,9,10‐hexa­hydro­acridine‐1,8(2H,5H)‐dione, C₂₄H₂₈FNO₂, (I), crystallizes with two crystallographically independent mol­ecules (which differ slightly in conformation), while 10‐(4‐fluoro­phenyl)‐9‐propyl‐3,3,6,6‐tetra­methyl‐3,4,6,7,9,10‐hexa­hydro­acridine‐1,8(2H,5H)‐dione, C₂₆H₃₂FNO₂, (II), crystallizes with one mol­ecule per asymmetric unit. In both structures, the central ring in the acridine moiety is in a sofa conformation, while the outer rings adopt intermediate half‐chair/sofa conformations. The central pyridine ring is orthogonal to the substituted phenyl ring. In both structures, the packing of the crystal is stabilized by C—H?O intermolecular hydrogen bonds.     

Self‐assembly of 2‐pivaloyl‐6‐chloro­pterin

In the title compound, N‐(6‐chloro‐4‐oxo‐3,4‐di­hydro­pteridin‐2‐yl)­‐2,2‐di­methyl­propan­amide, C₁₁H₁₂ClN₅O₂, the rings in the pterin moiety are planar. The amide carbonyl O atom is in syn‐periplanar conformation while the C—N—C—C propanamide linkage is antiperiplanar. The N—H?N and N—H?O intermolecular hydrogen bonds transform the mol­ecules into infinite chains.     

Comparison of conventional and synchrotron X‐ray structure deter­minations of the adduct 1,2,4,5‐tetrahydroxybenzene–2,5‐dihydroxy‐1,4‐benzoquinone (1/1) and a conventional X‐ray structure determination of 1,2,4,5‐tetrahydroxybenzene monohydrate

The X‐ray structure of 1,2,4,5‐tetra­hydroxy­benzene (benzene‐1,2,4,5‐tetrol) monohydrate, C₆H₆O₄·H₂O, (I), reveals columns of 1,2,4,5‐tetra­hydroxy­benzene parallel to the b axis that are separated by 3.364 (12) and 3.453 (11) Å. Molecules in adjacent columns are tilted relative to each other by 27.78 (8)°. Water mol­ecules fill the channels between the columns and are involved in hydrogen‐bonding interactions with the 1,2,4,5‐tetra­hydroxy­benzene mol­ecules. The crystal structure of the adduct 1,2,4,5‐tetra­hydroxy­benzene–2,5‐di­hydroxy‐1,4‐benzo­quinone (1/1), C₆H₆O₄·C₆H₄O₄, (II), reveals alternating mol­ecules of 1,2,4,5‐tetra­hydroxy­benzene and 2,5‐di­hydroxy‐1,4‐benzo­quinone (both lying on inversion centers), and a zigzag hydrogen‐bonded network connecting mol­ecules in three dimensions. For compound (II), the conventional X‐ray determination, (IIa), is in very good agreement with the synchrotron X‐ray determination, (IIb). When differences in data collection temperatures are taken into account, even the displacement parameters are in very good agreement.     

The antifolate trimetrexate: ­observation of the enzyme‐binding conformation

The crystal structure of the title compound contains four 2,4‐di­amino‐5‐methyl‐6‐[(3,4,5‐tri­methoxy­anilino)­methyl]­quin­az­oline mol­ecules, two di­methyl sulfoxide mol­ecules and three water mol­ecules in the asymmetric unit, i.e. 4C₁₉H₂₃N₅O₃·2C₂H₆OS·3H₂O. All four quinazoline mol­ecules adopt trans,gauche conformations. An extensive hydrogen‐bond network involving N?N base‐pairing interactions, as well as the di­methyl sulfoxide and water mol­ecules, stabilizes the crystal structure.     

trans‐Di­chloro‐cis‐bis(3,6‐di­methyl­carbazolyl)‐cis‐bis­(tetra­hydro­furan)­zirconium(IV) benzene sesquisolvate

In the title compound, [ZrCl₂(C₁₄H₁₂N)₂(C₄H₈O)₂]·1.5C₆H₆, the Zr atom is pseudo‐octahedral, with two Cl atoms in trans positions and two tetra­hydro­furan mol­ecules in cis positions. The two 3,6‐di­methyl­carbazolyl ligands are in cis positions and are canted with respect to one another. The two Zr—N distances are 2.1148 (18) and 2.1236 (18) Å, and the N—Zr—N angle is 95.08 (7)°. The title compound crystallizes as the benzene solvate, with one of the benzene mol­ecules positioned on an inversion center.     

1,3‐Dibenzoylimidazolidine‐2‐thione and 1,3‐dibenzo­yl‐3,4,5,6‐tetra­hydro­pyrimidine‐2(1H)‐thione

The title compounds, 1,3‐dibenzo­ylimidazolidine‐2‐thione, C₁₇H₁₄N₂O₂S, (I), and 1,3‐dibenzo­yl‐3,4,5,6‐tetra­hydro­pyrimidine‐2(1H)‐thione, C₁₈H₁₆N₂O₂S, (II), were obtained from the reactions of imidazolidine‐2‐thione and 1,4,5,6‐tetra­hydro­pyrimidine‐2‐thiol, respectively, with benzoyl chloride. Compounds (I) and (II) contain, respectively, imidazolidinethione [C=S = 1.6509 (14) Å] and ­pyrimidinethione [C=S = 1.6918 (19) Å] moieties bonded to two benzoyl rings. The mol­ecules of (I) exhibit C₂ symmetry, the C=S bond lying along the twofold rotation axis, while the mol­ecules of (II) have mirror symmetry (C_s). The imida­zolidine ring in (I) is essentially planar, while the pyrimidine ring in (II) adopts a boat conformation. Mol­ecules of (I) are linked by weak inter­molecular C—H⋯O inter­actions, while mol­ecules of (II) are held together by van der Waals inter­actions.     

Two nickel complexes stabilized by nitrate counter‐ions

Two new nickel nitrates, di­aqua­bis(3,4,7,8‐tetra­methyl‐1,10‐phenanthroline‐κ²N,N′)­nickel(II) dinitrate methanol solvate, [Ni(C₁₆H₁₆N₂)₂(H₂O)₂](NO₃)₂·CH₄O, (I), and tri­aqua­[2,4,6‐tris(2‐pyridyl)‐1,3,5‐triazine‐κ³N¹,N²,N⁶]nickel(II) di­ni­trate trihydrate, [Ni(C₁₈H₁₂N₆)(H₂O)₃](NO₃)₂·3H₂O, (II), are reported. In both structures, the cation is octahedrally coordinated, to two bidentate 3,4,7,8‐tetra­methyl‐1,10‐phenanthroline (tmp) and two water mol­ecules in (I), and to one tridentate 2,4,6‐tris(2‐pyridyl)‐1,3,5‐triazine (tpt) and three water mol­ecules in (II). Both structures are stabilized by extensive hydrogen‐bonding interactions.     

1H‐Imidazol‐1‐yl 1,2,3,4‐tetra­hydro­isoquinolin‐2‐yl ketone

In the crystal structure of the title compound, C₁₃H₁₃N₃O, the C—N_imidazole bond length of 1.431 (3) Å is shorter than that observed [1.466 (6) Å] in the corresponding carbamoyl­imidazolium salt 3‐methyl‐1‐(1,2,3,4‐tetra­hydro­isoquinolin‐2‐yl­carbonyl)­imidazolium iodide. A comparision of these compounds is used to highlight the structural differences that occur as a result of the imidazolium effect. Weak C—H⋯O hydrogen bonds link mol­ecules into extended tapes in the a direction.     

A bis­(acetyl­acetonato)­uranium(IV) complex of the Schiff base N,N′‐bis(3‐hydroxy­salicyl­idene)‐2‐methyl‐1,2‐propane­di­amine

The title complex, bis­(acetyl­acetonato‐κ²O,O′)[N,N′‐bis(3‐hydroxy‐2‐oxidobenzaldimino)‐2‐methyl‐1,2‐propane­di­amine‐κ⁴N,O,O′,N′]­uranium(IV) tetra­hydro­furan solvate, [U(C₁₈H₁₈N₂O₄)(C₅H₇O₂)₂]·C₄H₈O, is a rare example of a uranium(IV) complex with a compartmental Schiff base. The U atom is located in the N₂O₂ inner site of the hexadentate N,N′‐bis(3‐hydroxy‐2‐oxidobenzaldimino)‐2‐methyl‐1,2‐pro­pane­di­amine group and is bound also to the two O atoms of both acetyl­acetonate moieties, which results in a dodecahedral coordination environment. Centrosymmetric dimers are formed through intermolecular hydrogen bonds that link the terminal uncoordinated hydroxy groups to one another and to the O atoms of the acetyl­acetonate ligands.     

3‐Methyl 5‐isopropyl 2‐methoxy­imino­methyl‐6‐methyl‐4‐(3‐nitro­phenyl)‐1,4‐di­hydro­pyridine‐3,5‐di­carboxyl­ate

The crystal structure of the title compound, C₂₀H₂₃N₃O₇, consists of relatively isolated mol­ecules. The substituted 1,4‐di­hydro­pyridine ring adopts a flattened boat conformation. Both ester groups, at positions 3 and 5, have cis,cis geometry. The phenyl ring is nearly planar and is approximately perpendicular to the 1,4‐di­hydro­pyridine ring (dihedral angle 87.70°).     

(5S*,6R*)‐1,7‐Dioxa­di­spiro­[4.0.4.4]­tetra­decane‐2,8‐dione

The title compound, C₁₂H₁₆O₄, (I), was prepared by oxidation of (5S*,6R*)‐1,7‐di­oxa­di­spiro­[4.0.4.4]­tetra­decane‐2,8‐diol us­ing silver(I) carbonate and posesses a cis configuration of the two five‐membered‐ring lactones fused spiro to the six‐membered carbocycle, which has a chair conformation. It represents an exceptional structure for bis‐tetra­hydro­furan units, which are interesting building blocks in natural products. The synthesis, spectroscopic data and X‐ray structural analysis are described. The crystal contains discrete mol­ecules separated by normal van der Waals distances.     

l‐Phenyl­alanyl‐l‐tryptophan 0.75‐hydrate

The title compound, C₂₀H₂₁N₃O₃·0.75H₂O, crystallizes as exceedingly thin fibers. The crystal packing arrangement is related to those of other hydro­phobic dipeptides with phenyl­alanine residues, but the structure has pseudo‐tetra­gonal symmetry in an ortho­rhom­bic space group with four peptide mol­ecules and three water mol­ecules in the asymmetric unit.     

NiII and ZnII complexes of the hexadentate macrocyclic ligand cis‐6,13‐di­methyl‐1,4,8,11‐tetra­aza­cyclo­tetra­decane‐6,13‐di­amine

The title pendent‐arm macrocyclic hexa­amine ligand binds stereospecifically in a hexadentate manner, and we report here its isomorphous Ni^II and Zn^II complexes (both as perchlorate salts), namely (cis‐6,13‐di­methyl‐1,4,8,11‐tetra­aza­cyclo­tetra­decane‐6,13‐di­amine‐κ⁶N)­nickel(II) di­per­chlorate, [Ni(C₁₂H₃₀N₆)]­­(ClO₄)₂, and (cis‐6,13‐di­methyl‐1,4,8,11‐tetraaza‐cyclo­tetra­decane‐6,13‐di­amine‐κ⁶N)­zinc(II) di­per­chlorate, [Zn(C₁₂H₃₀N₆)]­(ClO₄)₂. Distortion of the N—M—N valence angles from their ideal octahedral values becomes more pronounced with increasing metal‐ion size and the present results are compared with other structures of this ligand.