基团贡献法估算线性烷基醇分子体系电子相关能

在本文中,提出了极性基团电子相关能贡献的定义,并在MP2-OPT2/6-311++G(d)水平上计算了CH₃(CH₂) _mOH( m=0-4)体系中HO-、CH₃-和-CH₂-基团电子相关能贡献值。计算结果表明,在CH₃(CH₂) _mOH( m=0-4)体系中端基HO-、CH₃-基团电子相关能贡献值 E_corr(HO-)和 E_corr(cH₃-)的数值随着 m的增加而逐渐减小。同一体系中a -CH₂-基团电子相关能贡献值大于其它-CH₂-基团电子相关能贡献值,在CH₃(CH₂) _mOH( m=1-4)体系中,距离端基HO-基团越远的-CH₂-基团其电子相关能贡献值越小;通过计算结果可以推断,在CH₃(CH₂) _mOH体系中随着 m的逐渐增加,相对远离端基HO-的-CH₂-基团的电子相关能贡献值表现出收敛趋向并将趋于不变,此-CH₂-基团可看作一个标准的亚甲基而且其 E_corr(-cH₂-)的数值在CH₃(CH₂) _mOH体系中具有传递性。在MP2-OPT2/6-311++G(d)水平上对CH₃(CH₂) _mOH( m=2-4)体系的计算结果和应用Gaussian 98程序在MP2/6-311++G(d)//HF/6-311++G(d)水平上对CH₃(CH₂) _mOH( m=2-7)体系的计算结果均表明,体系总电子相关能与（ m-1）呈 中 m是体系中亚甲乙烯基的数值。     

A theoretical study on C2HXSi silylenes (X = H,CN, NH2, and OMe)

Relative stabilities and structural characters of 30 silylenic C₂HXSi species (X = H, NH₂, CN, and OMe), with singlet (s) and/or triplet (t) states, are calculated at six levels of theory: HF/6‐311++G**, MP3/6‐31G*, B1LYP/6‐311++G**, B3LYP/6‐311++G**, MP2/6‐311++G**, and MP4(SDTQ)/6‐311++G**. The four possible isomers considered for C₂SiHX are (i) 3‐X‐1‐silacyclopropenylidene ( 1 _s‐X and 1 _t‐X ), (ii) X‐vinilydensilylene ( 2 _s‐X and 2 _t‐X ), (iii) ethynyl‐X‐silylene ( 3 _s‐X and 3 _t‐X ), and (iv) (X‐ethynyl)silylene ( 4 _s‐X and 4 _t‐X ). The GIAO–NICS calculations show that singlet cyclic structures, 1 _s‐X , are considerably more aromatic than benzene. Conversely, triplet cyclic C₂HCNSi breaks down through optimization, and transforms into a novel high‐spin acyclic carbenosilylene minimum ( 1 _t‐CN ). Singlet 3 and triplet 3 cross at a divalent angle (|XSiC) of 152°. This angle narrows to 137° for crossing of singlet 3 _s‐CN and triplet, 3 _t‐CN . The smallest |XSiC occurs at 132° for crossing of 3 _s‐H and 3 _t‐H . © 2007 Wiley Periodicals, Inc. Heteroatom Chem 18:283–293, 2007; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20297     

Quantum study on the electrocyclic reactions of CH2CHCHCHX (XH,F, Cl)

The microscopic mechanisms of the electrocyclic reactions for cis‐1,3‐butadiene and its monofluoro‐, monochloroderivatives have been studied by density functional theory (DFT), using the B3LYP method and 6‐311++G** basis sets. We optimized the geometric configurations of reactants, transition states, and products; verified all the probable transition states through vibrational analysis; and calculated the relative single‐point energies at the QCISD(T)/6‐311++G**//B3LYP/6‐311++G**. The results show that the monofluoro‐, monochloroderivatives of cis‐1,3‐butadiene both have two conformers; the reactant favors the electrocyclic reaction when one outboard hydrogen atom of the CH₂ groups is substituted by the fluorine or chlorine atom. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2004     

Theoretical investigation of the weakly dihydrogen bonded dimers H2 − nXnAlHHArF and H2 − nXnAlHHKrF (n = 0–2; X = F, Cl)

An ab initio computational study of the properties of the dihydrogen-bonded complexes of H_{2 − n}X_nAlH (n = 0–2; X = F, Cl) with the rare gas (Rg) compounds HArF and HKrF was carried out at the MP2(full)/6-311++G(2d,2p) level of theory. For all the studied complexes, we found a low zero-point corrected binding energies. Large red shifts of the H–Rg vibrational stretching frequency in both complexes were predicted. Electrostatic interactions between the individual monomers are also predicted.     

The effect of water‐mediated catalysis on the intramolecular proton‐transfer reactions of the isomers of 5‐chlorouracil: a theoretical study

The geometrical structures and thermal energies (E), enthalpies (H) and Gibbs free energies (G) of 13 isomers of 5‐chlorouracil (5ClU) in the gas and water phases were investigated using the density functional theory (DFT) method at the M06‐2X/6‐311++g(3df,3pd) level. The isomers of 5ClU can be microhydrated at different molecular target sites. The mono‐ and dihydrated forms are the most stable in both the gas and water phases, and, because of the intermolecular interactions, the hydrations lead to a degree of change in the stability trend. Two types of isomerizations were considered: the internal H—O bond rotations in which the H atom rotates 180° around the C—O bond and the intramolecular proton‐transfer reactions in which an H atom is transferred between an O atom and a neighbouring N atom. The forward and backward energy barriers for isomerizations of nonhydrated 5ClU were calculated. In addition, 16 optimized transition‐state structures for water‐mediated catalysis on isomerizations of 5ClU were investigated. The forward and backward proton‐transfer energy barriers of water‐mediated catalysis on isomerizations of 5ClU were obtained. The results indicate that the catalytic effect of two H₂O molecules is much greater than that of one H₂O molecule in isomerizations of 5ClU.     

Substituent effect on intramolecular hydrogen bonding in 2‐hydroxybenzaldehyde

The effect of some substituents on intramolecular hydrogen bonding of 5‐X‐2‐hydroxybenzaldehyde (5‐X‐2‐HBA) has been studied by B3LYP and MP2 methods using 6‐311++G** and AUG‐cc‐PVTZ basis sets. The relationship between hydrogen bond energy E_HB and electron donation (or withdrawal) of substituents has been investigated. An approximately good linear relationship has been detected between Hammett coefficients and hydrogen bond formation energy (R² = 0.98). Herein, population analysis has been performed by atoms in molecules (AIM) and natural bond orbital (NBO) methods. The results of AIM and NBO analyses are in a good agreement with calculated energy values. Furthermore, correlation between ring aromaticity and hydrogen bonding has been investigated by nucleus‐independent chemical shift (NICS) at GIAO/B3LYP/6‐311++G** level of theory. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

The O···H intramolecular hydrogen bond in 4‐X‐2‐hydroxybenzaldehydes: The relationships between geometrical parameters,estimated binding energies,and NMR data

The relationships among geometrical parameters, estimated binding energies, and nuclear magnetic resonance data in –C?O···H? O? intramolecular H‐bond of some substituted 2‐hydroxybenzaldehyde have theoretically been studied by B3LYP and MP2 methods with 6‐311++G** and AUG‐cc‐PVTZ basis sets. All substituents increase estimated hydrogen bond energies E_HBs (with the exception of NO₂ and C₂H₅), which are in good correlation with geometrical parameters, topological properties of electron density calculated at O···H bond critical points and ring critical points by using atoms in molecules method, the results of natural bond orbital analysis, and calculated nuclear magnetic resonance data. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Long‐range π‐type hydrogen bond in dimers CH2?HF,CH2O?H2O,and CH2O?NH3

Using four basis bets, (6‐311G(d,p), 6‐31+G(d,p), 6‐31++G(2d,2p), and 6‐311++G(3df,3pd), the optimized structures with all real frequencies were obtained at the MP2 level for the dimers CH₂O? HF, CH₂O? H₂O, CH₂O? NH₃, and CH₂O? CH₄. The structures of CH₂O? HF, CH₂O? H₂O, and CH₂O? NH₃ are cycle‐shaped, which result from the larger bend of σ‐type hydrogen bonds. The bend of σ‐type H‐bond O…H? Y (Y?F, O, N) is illustrated and interpreted by an attractive interaction of a chemically intuitive π‐type hydrogen bond. The π‐type hydrogen bond is the interaction between one of the H atoms of CH₂O and lone pair(s) on the F atom in HF, the O atom in H₂O, or the N atom in NH₃. In contrast with the above three dimers, for CH₂O? CH₄, because there is not a π‐type hydrogen bond to bend its linear hydrogen bond, the structure of CH₂O? CH₄ is noncyclic shaped. The interaction energy of hydrogen bonds and the π‐type H‐bond are calculated and discussed at the CCSD (T)/6‐311++G(3df,3pd) level. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2005     

Theoretical Study of Remote Substituent Effects on X-H （X=CH2, NH,O） Bond Dissociation Energies of Azulene

In the study, the X-H （X=CH2, NH, O） bond dissociation energies （BDE） of para-substituted azulene （Y-C10H8X-H） were predicted theoretically for the first time using Density Functronal Theory （DFT） methods at UB3LYP/6-311 ＋ ＋g（2df,2p）//UB3LYP/6-31 ＋g（d） level. It was found that the substituents exerted similar effects on the X-H BDE of azulene as those on benzene, except for 6-substituted 2-methylazulene. Owing to the substituent-dipole interaction, the reaction constants （ρ^＋） of 2- and 6-Y-CIoHsX-H （X=NH and O only） varied violently. The origin of the substituent effects on the X-H BDE of azulene was found, by both GE/RE and SIE theory, to be directly associated with variation of the radical effects, although the ground effects also played a modest role in determining the net. substituent effects.     

Mechanical polishing,surface roughness,near‐surface deformation,and electrochemical corrosion of Alloy 690TT

The effects of mechanical grinding/polishing, surface roughness, and near‐surface deformation on the electrochemical corrosion behavior of thermally treated (TT) Alloy 690 were studied in a sodium chloride solution. The X‐ray photoelectron spectroscopy and transmission electron microscopy analyses revealed that mechanical grinding/polishing can change the ratio of the elements at the surface of the as‐received Alloy 690TT specimen by removing its Cr‐rich outer layer and causing deformation at the near‐surface microstructure, something which has a direct impact on the rate of the oxygen reduction reaction (ORR), the pitting potential (E_pit), and the corrosion potential (E_corr) of Alloy 690TT. It was observed that the ratio of Cr in the surface is a significant factor that controls the rate of the ORR and the corrosion parameters such as E_corr. Higher amounts of Cr at the surface accelerate the ORR. The near‐surface deformation shifts the E_pit values towards less positive potentials. It was also found that due to the different near‐surface chemical composition of the as‐received Alloy 690TT specimen compared with the ground and the polished specimens, the surface roughness parameters do not have a regular correlation with the rate of the ORR and the values of the E_corr and the E_pit. Only the passive current density increases when the surface roughness is increased. Copyright © 2015 John Wiley & Sons, Ltd.     

Study on Pair Correlation Energies of Isoelectronic Systems F^－, HF and H2F^＋

The intrapair and interpair correlation energies of F-, HF and H2F^ systems are calculated and analyzed using MP2-OPT2 method of MELD program with cc-PVSZ^* basis set. From the analysis of pair correlation energies of these isoelectronlc sysoterns, it is found that the 1sF^2 pair correlation energy is trans-ferable in these three isociectronic systems. According to the definition of pair correlation contribution of one electron pair to a system, the pair correlation contribution values of these three systems are calculated. The correlation contribution values of inner electron pairs and H—F bonding electron pair in HF molecule with those in H2F^ system are compared. The results indicate that the bonding effect of a molecule is one of the im-portant factors to influence electron correlation energy of the system. The comparison of correlation energy contributions in-cluding triple and quadruple excitations with those only includ-ing singles and doubles calculated with 6-311 G(d) basis set shows that the higher.excitation correlation energy contribution gives more than 2 % of the total correlation energy for these sys-tems.     

BrO-H2O 及 HOBr-H2O复合物偶合方式的理论研究

在6-311++G(d,p)水平上采用四种方法讨论了两种BrO-H₂O和三种HOBr-H₂O复合物的构型性质。在两种BrO-H₂O复合物中，结合能为11.37–13.92 J/mol的复合物2 （电子态为²A′）最稳定，该复合物是通过BrO中的Br原子和水中的O原子结合的。三种HOBr-H₂O复合物中，复合物3和4的结合能约为16.30–21.32 J/mol，三种复合物的稳定顺序为：复合物3 ≈ 复合物4 > 复合物5。     

Density functional theory calculation of 2p spectra of SiH4, PH3, H2S,HCl, and Ar

The method developed recently for prediction of 1s electron spectra is now extended to the 2p spectra of SiH₄, PH₃, H₂S, HCl, and Ar. The method for X‐ray absorption spectra involves the use of ΔE for the excitation and ionization energies, and application of time‐dependent density functional theory using the exchange‐correlation potential known as statistical average of orbital potentials for the intensities. Additional assumptions and approximations are also made. The best exchange‐correlation functional E_xc for the earlier calculation of ΔE in 1s spectra of C to Ne (namely Perdew–Wang 1986 exchange, combined with Perdew–Wang 1991 correlation) is no longer used in this work on 2p spectra of Si to Ar. Instead, recently tested E_xc good for 2p core‐electron binding energies (known as OPTX) for exchange and LYP for correlation, plus scalar zeroth‐order regular approximation is adopted here for the ΔE calculations. Our calculated X‐ray absorption spectra are generally in good agreement with experiment. Although the predictions for the higher excitations suffer from basis set difficulties, our procedure should be helpful in the interpretation of absorption spectra of 2p electrons of Si to Ar. In addition, we report calculated results for other kinds of electron spectra for SiH₄, PH₃, H₂S, HCl, and Ar, including valence electron ionizations and excitations as well as X‐ray emission. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Structure and energetic of Bn (n = 2–12) clusters: Electronic structure calculations

The electronic and geometric structures, total and binding energies, first and second energy differences, harmonic frequencies, point symmetries, and highest occupied molecular orbital–lowest unoccupied molecular orbital (HOMO–LUMO) gaps of small and neutral B_n (n = 2–12) clusters have been investigated using density functional theory (DFT), B3LYP with 6‐311++G(d,p) basis set. Linear, planar, convex, quasi‐planar, three‐dimensional (3D) cage, and open‐cage structures have been found. None of the lowest energy structures and their isomers has an inner atom; i.e., all the atoms are positioned at the surface. Within this size range, the planar and quasi‐planar (convex) structures have the lowest energies. The first and the second energy differences are used to obtain the most stable sizes. A simple growth path is also discussed with the studied sizes and isomers. The results have been compared with previously available theoretical and experimental works. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

The influence of formamide (model of protein unit) on the intramolecular proton transfer in the DNA simple base guanine: A density functional theory study

For the purpose of investigating the influence of protein unit on the intramolecular proton transfer (IPT) reactions in the simple base guanine, a simple model (formamide) of peptides is designed to biological system investigations, and five complexes of formamide–guanine (FG1, FG2, FG3, FG4, and FG5) are determined at the B3LYP/6‐311++G(d,p) level of theory. For comparison, HF and MP2 methods are also used in this paper. The proton transfer (PT) reaction processes of guanine and FGs have been investigated employing the B3LYP/6‐311++G(d,p) level of theory. The selected thermodynamic and kinetic parameters, such as the activation energies (E_a), changes of enthalpy (ΔH) and changes of free energies (ΔG), as well as the equilibrium constants (K_p) for those reaction processes, have also been obtained by calculational means. The calculated results indicate that the assisted and protected effects of formamide on IPT in guanine are site‐dependent. CH1 is the lowest activation energy needed PT process no matter where the formamide molecule is located in. The activation energy of CH1 with formamide in S2 is the lowest one (153.3 KJ/mol), whereas the one of CH5 with formamide in S5 is the highest (318.3 KJ/mol). © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Theoretical study of molecular interactions of sulfur ylide with HSX (X = F, Cl, and Br) molecules

The molecular interactions between sulfur ylide (SY) and HSX molecules (X = F, Cl and Br) were investigated using the MP2 method with the 6-311++G (2d, 2p) basis set. The SY (CH₂=SH₂) have two reactive sites: CH₂ (denoted as C-interaction) and SH₂ (S-interaction) that both could interact with three atoms of HSX molecules. The results show that S···C, X···C, and H···C interactions (C-interactions) is preference over the X···S, H···S, and H···X interactions. Quantum theories of atoms in molecules and natural bond orbitals methods have been applied to analyze the intermolecular interactions. Good correlations have been found between the interaction energies, the second-order perturbation energies E⁽²⁾, and the charge transfer qCT in the studied systems.     

Geometries,vibrational frequencies,and electron affinities of X2Cl (X=C,Si,Ge) clusters

Ab initio quantum chemical calculations have been performed on X₂Cl^? and X₂Cl (X = C, Si, Ge) clusters. The geometrical structures, vibrational frequencies, electronic properties and dissociation energies are investigated at the Hartree–Fock (HF), Møller–Plesset second‐ and fourth‐order (MP2, MP4), CCSD(T) level with the 6‐311+G(d) basis set. The X₂Cl (X = C, Si, Ge) and X₂Cl^? (X = Si, Ge) take a bent shape obtained at the ground state, while C₂Cl^? has a linear structure. The impact on internal electron transfer between the X₂Cl and the corresponding anional clusters is studied. The three different types of electron affinities (EAs) at the CCSD(T) are reported. The most reliable adiabatic electronic affinities, obtained at the CCSD(T)/cc‐pvqz level of theory, are predicted to be 3.30, 2.62, and 1.98 eV for C₂Cl, Si₂Cl, and Ge₂Cl, respectively. The calculated EAs of C₂Cl and Ge₂Cl are in good agreement with theoretical results reported. The correlation effects and basis sets effects on the geometrical structures and dissociation energies are discussed. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Tautomerism of monochalcogenosilanoic acids CH3Si(O)XH (X = S,Se, Te) in the gas phase and in the polar and aprotic solution: An ab initio computational investigation

Computational investigations by an ab initio molecular orbital method (HF and MP2) with the 6‐311+G(d,p) and 6‐311++G(2df, 2pd) basis sets on the tautomerism of three monochalcogenosilanoic acids CH₃Si(?O)XH (X = S, Se, and Te) in the gas phase and a polar and aprotic solution tetrahydrofuran (THF) was undertaken. Calculated results show that the silanol forms CH₃Si(?X)OH are much more stable than the silanone forms CH₃Si(?O)XH in the gas‐phase, which is different from the monochalcogenocarboxylic acids, where the keto forms CH₃C(?O)XH are dominant. This situation may be attributed to the fact that the Si? O and O? H single bonds in the silanol forms are stronger than the Si? X and X? H single bonds in the silanone forms, respectively, even though the Si?X (X = S, Se, and Te) double bonds are much weaker than the Si?O double bond. These results indicate that the stability of the monochalcogenosilanoic acid tautomers is not determined by the double bond energies, contrary to the earlier explanation based on the incorrect assumption that the Si?S double bond is stronger than the S?O double bond for the tautomeric equilibrium of RSi(?O)SH (R?H, F, Cl, CH₃, OH, NH₂) to shift towards the thione forms [RSi(?S)OH]. The binding with CH₃OCH₃ enhances the preference of the silanol form in the tautomeric equilibrium, and meanwhile significantly lowers the tautomeric barriers by more than 34 kJ/mol in THF solution. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Ethyl 3‐[1‐(5,5‐dimethyl‐2‐oxo‐1,3,2‐dioxaphosphorin‐2‐yl)propan‐2‐ylidene]carbazate: a combined X‐ray and density functional theory (DFT) study

In the title compound, C₁₁H₂₁N₂O₅P, one of the two carbazate N atoms is involved in the C=N double bond and the H atom of the second N atom is engaged in an intramolecular hydrogen bond with an O atom from the dimethylphosphorin‐2‐yl group, which is in an uncommon cis position with respect to the carbamate group. The cohesion of the crystal structure is also reinforced by weak intermolecular hydrogen bonds. Density functional theory (DFT) calculations at the B3LYP/6‐311++g(2d,2p) level revealed the lowest energy structure to have a Z configuration at the C=N bond, which is consistent with the configuration found in the X‐ray crystal structure, as well as a less stable E counterpart which lies 2.0 kcal mol⁻¹ higher in potential energy. Correlations between the experimental and computational studies are discussed.