Size and shape of soil humic acids estimated by viscosity and molecular weight

Ultrafiltration fractions of three soil humic acids were characterized by viscometry and high performance size-exclusion chromatography (HPSEC) in order to estimate shapes and hydrodynamic sizes. Intrinsic viscosities under given solute/solvent/temperature conditions were obtained by extrapolating the concentration dependence of reduced viscosities to zero concentration. Molecular mass (weight average molecular weight (M (w)) and number average molecular weight (M (n))) and hydrodynamic radius (R(H)) were determined by HPSEC using pullulan as calibrant. Values of M (w) and M (n) ranged from 15 to 118 x 10(3) and from 9 to 50 x 10(3) (g mol(-1)), respectively. Polydispersity, as indicated by M (w)/M (n), increased with increasing filter size from 1.5 to 2.4. The hydrodynamic radii (R(H)) ranged between 2.2 and 6.4 nm. For each humic acid, M (w) and [eta] were related. Mark-Houwink coefficients calculated on the basis of the M (w)-[eta] relationships suggested restricted flexible chains for two of the humic acids and a branched structure for the third humic acid. Those structures probably behave as hydrated sphere colloids in a good solvent. Hydrodynamic radii of fractions calculated from [eta] using Einstein's equation, which is applicable to hydrated sphere colloids, ranged from 2.2 to 7.1 nm. These dimensions are fit to the size of nanospaces on and between clay minerals and micropores in soil particle aggregates. On the other hand, the good agreement of R(H) values obtained by applying Einstein's equation with those directly determined by HPSEC suggests that pullulan is a suitable calibrant for estimation of molecular mass and size of humic acids by HPSEC.     

Fast molecular mass and size characterization of polysaccharides using asymmetrical flow field-flow fractionation-multiangle light scattering

Asymmetrical flow field-flow fractionation (asymmetrical flow FFF), connected on-line to multi-angle light scattering detection (MALS) was shown here to be an efficient method for size characterization of pullulan standards and dextrans ranging from 20 000 up to 2 000 000 in molecular mass. The characterization of molecular mass and the molecular mass distribution of these polysaccharides is often complex and may require different methods. Using asymmetrical flow FFF-MALS, information was obtained not only about molecular mass and molecular mass distribution but also about hydrodynamic size as well as radius of gyration and conformation. The analysis time was very short, often below 5 min. It was shown that the pullulan standards have a narrow molecular mass distribution compared to the more polydisperse dextrans. Obtained molecular masses and distributions were in good agreement with data from the manufacturer. The dextrans, especially at high molecular mass, were found to have a more compact structure than the pullulans in both water and 0.1 M NaCl.     

胰蛋白酶水解全酪蛋白反应过程中的分析

 将高效凝胶排阻 (HPSEC)技术与水解度 (DH)概念相结合 ,对酪蛋白 胰蛋白酶水解体系的酶解反应过程进行分析 ,得到定量表征复杂酶解反应进程和不同DH值时多样性酶解产物相对分子质量分布的二维图线 ;依据蛋白质结构信息 ,结合HPSEC实验谱图 ,对胰蛋白酶作用于酪蛋白时的酶解断裂位点进行剖析 ,初步推断反应历程 ,并得到理论酶解肽段的相对分子质量分布图及酶解物中活性多肽酪蛋白磷酸肽 (CPPs)肽谱。     

Molecular size fractionation of soil humic acids using preparative high performance size-exclusion chromatography

High performance size-exclusion chromatography (HPSEC) is useful for the molecular size separation of soil humic acids (HAs), but there is no method available for various HAs with different chemical properties. In this paper the authors propose a new preparative HPSEC method for various soil HAs. Three soil HAs with different chemical properties were fractionated by a Shodex OHpak SB-2004 HQ column with 10mM sodium phosphate buffer (pH 7.0)/acetonitrile (3:1, v/v) as an eluent. The HAs eluted within a reasonable column range time (12-25 min) without peak tailing. Preparative HPSEC chromatograms of these HAs indicated that non-size-exclusion effects were suppressed. The separated fractions were analyzed by HPSEC to determine their apparent molecular weights. These decreased sequentially from fraction 1 to fraction 10, suggesting that the HAs had been separated by their molecular size. The size-separated fractions of the soil HA were mixed to compare them with unfractionated HA. The analytical HPSEC chromatogram of the mixed HA was almost identical to that of the unfractionated HA. It appears that the HAs do not adsorb specifically to the column during preparative HPSEC. Our preparative HPSEC method allows for rapid and reproducible separation of various soil HAs by molecular size.     

Behavior of polysaccharide assemblies in field-flow fractionation and size-exclusion chromatography

Asymmetric flow field-flow fractionation (AsFlFFF) and high-performance size-exclusion chromatography (HPSEC) are techniques for separating and characterizing macromolecules; until now the latter is more utilized for analyzing polysaccharides. The demand for characterizing complex, high-molar-mass polysaccharides has raised interest in the use of AsFlFFF in analyzing polymeric carbohydrates in addition to HPSEC. In this paper, we compare the behavior of arabinoxylan aggregates present in aqueous solution in AsFlFFF and HPSEC and their effect on the obtained molecular characteristics (molar mass averages and size). Although the amount of aggregates in aqueous arabinoxylan solutions may be low, their role needs to be understood to avoid erroneous interpretations of AsFlFFF and HPSEC data. When these two separation systems were compared, AsFlFFF seemed to possess more separation power for the differentiation of aggregates from individual chains than HPSEC. To our knowledge, this is the first report on the characterization of xylans with AsFlFFF.     

Electrospray ionization mass spectrometry of terrestrial humic substances and their size fractions

Electrospray ionization mass spectrometry (ESI-MS) was used to evaluate the average molecular mass of terrestrial humic substances, such as humic (HA) and fulvic (FA) acids from a soil, and humic acid from a lignite (NDL). Their ESI mass spectra, by direct infusion, gave average molecular masses comparable to those previously obtained for aquatic humic materials. The soil HA and FA were further separated in size-fractions by preparative high performance size exclusion chromatography (HPSEC) and analyzed with ESI-MS by both direct infusion and a further on-line analytical HPSEC. Unexpectedly, their average molecular mass was only slightly less than for the bulk sample and, despite different nominal molecular size, did not substantially vary among size-fractions. The values increased significantly (up to around 1200 Da) after on-line analytical HPSEC for the HA bulk sample, at both pH 8 and 4, and for the HA size-fractions when pH was reduced from 8 to 4. It was noticed that HA size-fractions at pH 8 were separated by on-line HPSEC in further peaks showing average masses which progressively increased with elution volume. Furthermore, when the HA and NDL bulk samples were sequentially ultracentrifuged at increasing rotational speed, their supernatants showed mass values which were larger than bulk samples and increased with rotational speed. These variations in mass values indicate that the electrospray ionization is dependent on the composition of the humic molecular mixtures and increases when their heterogeneity is progressively reduced. It is suggested that the dominance of hydrophobic compounds in humic supramolecular associations may inhibit the electrospray ionization of hydrophilic components. Our results show that ESI-MS is reasonably applicable to humic substances only after an extensive reduction of their chemical complexity.     

Influence of ionic strength and organic modifier concentrations on characterization of aquatic fulvic and humic acids by high-performance size-exclusion chromatography

Aquatic fulvic acid (FA) and humic acid (HA) were characterized by an aqueous high-performance size-exclusion chromatography (HPSEC) using a hydrophilic polymeric stationary phase and an aqueous eluent at neutral pH and low-ionic strength (5 mM Na2HPO4; final ionic strength, 13 mM). Employed HPSEC showed low sensitivity of FA to variations in ionic strength (13 and 100 mM) and contents of organic modifier (0.1 or 40% methanol) in aqueous eluent. Under these analytical conditions, peak maxima of relative UV signals versus molecular mass (Mr) defined as M'p and peak maxima of relative mass concentrations versus Mr defined as Mp of FA were shown to be located at 548-690 and 500, respectively. Organic modifier concentrations of 40% methanol in aqueous eluent enabled not only analysis of FA, but also analysis of some aquatic HA by HPSEC. Analysis showed M'p and Mp values of aquatic HAs around 1000 and 600, respectively. Measured molecular mass data of FA were found to be consistent with the recently published data describing low molecular masses of FA. Results recommend the use of the described HPSEC as a simple, rapid, reproducible, low-cost method giving consistent molecular sizes/masses of FA and some aquatic HAs.     

Nitroxide-mediated oxidation of cellulose using TEMPO derivatives: HPSEC and NMR analyses of the oxidized products

Regenerated cellulose (viscose rayon) was oxidized using NaBr, NaClO and 2,2,6,6-tetramethylpiperidine-1-oxyl radical (TEMPO) or one of ten related nitroxyl radicals in water at pH 10–11. The C6 primary hydroxyl groups in rayon were oxidized to carboxyl groups in most cases, thus giving water-soluble products. However, the oxidation times required for complete dissolution of the products varied substantially, depending on the nitroxyl radical used. Weight average degrees of polymerization (DPw) of the oxidized products were determined by means of high performance size exclusion chromatography (HPSEC) using pullulan standards. All the products had bimodal HPSEC distribution patterns, probably reflected by the solid-state structure of viscose rayon. When 4-acetamido-TEMPO and 4-carboxy-TEMPO were used, cellouronic acids having almost homogeneous chemical structures with higher DPw than for TEMPO were obtained quantitatively within 30 min. The oxidations using 4-amino-TEMPO, 4-carboxy-PROXYL and 4-carbamoyl-PROXYL gave cellouronic acids having the highest DPw, although reaction times of more than 4 h were required, and some side reactions occurred on the products.     

Improved separation of palladium species in biological matrices by using a combination of gel permeation chromatography and isotachophoresis

The binding of palladium to high-molecular-mass compounds in palladium-treated lettuce is investigated as an example for a biological matrix. The total palladium concentration in lettuce leaves is 10.3 ng/g wet weight. After homogenization, high-molecular-mass compounds (> 10 kDa) are isolated by ultrafiltration. For separation of these palladium species a combination of preparative gel permeation chromatography (GPC) and preparative isotachophoresis (ITP) is used. Palladium is determined in separated fractions by using a highly sensitive total reflection X-ray fluorescence (TXRF) method after preconcentration. After GPC separation, four main fractions of palladium species are collected, each containing palladium in ng quantities (3-10 ng). Two of these fractions are further separated by ITP, yielding at least three main peaks per GPC fraction, each containing palladium in the range of 0.3-3 ng. These palladium containing peaks are characterized by high-performance size exclusion chromatography (HPSEC) and capillary isotachophoresis (cITP) in parallel. HPSEC enables the estimation of the molecular mass of six main palladium peaks, covering a molecular mass range of 69-200 kDa. It is also shown that the estimation of molecular mass after separation is more reliable than the respective estimation directly in the first GPC run. However, cITP reveals that each of the separated peaks is still a mixture of at least five different compounds.     

Fluorophore-assisted carbohydrate electrophoresis for the determination of molecular mass of heparins and low-molecular-weight (LMW) heparins

We report the use of fluorophore-assisted carbohydrate electrophoresis (FACE) to determine the molecular mass (M) values of heparins (Heps) and low-molecular-weight (LMW)-Hep derivatives. Hep are labeled with 8-aminonaphthalene-1,3,6-trisulfonic acid and FACE is able to resolve each fraction as a discrete band depending on their M. After densitometric acquisition, the migration distance of each Hep standard is acquired and the third-grade polynomial calibration standard curve is determined by plotting the logarithms of the M values as a function of migration ratio. Purified Hep samples having different properties, pharmaceutical Heps and various LMW-Heps were analyzed by both FACE and conventional high-performance size-exclusion liquid chromatography (HPSEC) methods. The molecular weight value on the top of the chromatographic peak (Mp), the number-average Mn, weight-average Mw and polydispersity (Mw/Mn) were examined by both techniques and found to be similar. This approach offers certain advantages over the HPSEC method. The derivatization process with 8-aminonaphthalene-1,3,6-trisulfonic acid is complete after 4 h so that many samples may be analyzed in a day also considering that multiple samples can be run simultaneously and in parallel and that a single FACE analysis requires approx. 15 min. Furthermore, FACE is a very sensitive method as it requires approx. 5-10 microg of Heps, about 10-100-fold lower than samples and standards used in HPSEC evaluation. Finally, the utilization of mini-gels allows the use of very low amounts of reagents with neither expensive equipment nor any complicated procedures having to be applied. This study demonstrates that FACE analysis is a sensitive method for the determination of the M values of Heps and LMW-Heps with possible utilization in virtually any kind of research and development such as quality control laboratories due to its rapid, parallel analysis of multiple samples by means of common and simple largely used analytical laboratory equipment.     

The thermal degradation kinetics of dextran and pullulan

The effect of molar mass and, in the case of dextran, of the degree of branching on the thermal degradation kinetics of dextran and pullulan was studied in the presence and absence of oxygen. Although the initial mass loss of the dextran samples occurred at higher temperatures than that of the pullulan samples, the overall thermal degradation activation energies were lower for dextran than for pullulan. In the case of dextran the thermal stability was found to decrease with molar mass and degree of branching. The molar mass of pullulan, in the range of 10⁴ to 10⁵ g/mol, appeared to have no significant influence on the thermal characteristics of the samples.     

Gas chromatographic determination of fatty acids contained in different lipid classes after their separation by solid-phase extraction

Enthalpic phenomena were shown to contribute to the size exclusion separation mechanisms during chromatographic analysis of solutions of pullulan and cellulose in LiCl-N,N-dimethylacetamide (LiCl-DMAc) solvent and eluent. The effect of LiCl concentration in the sample solutions and the effect of temperature were of the same order of magnitude for both pullulan and cellulose samples. This led to systematic errors in the determination of mean molecular mass in the range of tens of percent, depending on the chromatographic conditions and on the molecular mass of the analyte. The systematic error is much higher than the random errors; the typical values of the latter being up to a few percent (RSD). Low column temperature and a higher content of LiCl in the sample solution led to lower determined mean molecular mass values. This can be explained by a decrease in the interactions between dissolved macromolecules, although polymer-stationary phase interactions should also be taken into account. Furthermore, the cellulose stability in solution was determined: the zero order random degradation constant being k = 6.9 x 10(-8) mol mol-1 monomer day-1.     

Monodisperse lignin fractions as standards in size-exclusion analysis: Comparison with polystyrene standards

The difficulty of preparing monodisperse lignin fractions on a large scale is a limiting factor in many applications. The present paper addresses this problem by examining the properties and size-exclusion behavior of lignin isolated by the acetosolv pulping process from post-extraction crushed sugarcane bagasse. The isolated lignin was subjected to a solvent pretreatment, followed by preparative gel permeation chromatography fractionation. The fractions were analyzed by high-performance size-exclusion chromatography (HPSEC) and these samples showed a great decrease in polydispersity, compared to the original acetosolv lignin. Several fractions of very low polydispersity, close to unity, were employed as calibration curve standards in HPSEC analysis. This original analytical approach allowed calibration with these lignin fractions to be compared with the polystyrene standards that are universally employed for lignin molecular mass determination. This led to a noteworthy result, namely that the lignin fractions and polystyrene standards showed very similar behavior over a large range of molecular masses in a typical HPSEC analysis of acetosolv lignin.     

Glycosaminoglycans and proteins: different behaviours in high-performance size-exclusion chromatography

The influence of the conformation of globular proteins and glycosaminoglycans in high-performance size-exclusion chromatography (HPSEC) was studied. Glycosaminoglycans (heparin, chondroitin sulphate and dermatan sulphate) with different primary structures, sulphate-to-carboxyl ratios and physico-chemical properties were extracted and purified. Their physico-chemical properties and purity were evaluated by several analytical techniques. Glycosaminoglycans with different relative molecular masses (M_r) were prepared by a chemical depolymerization process. These heteropolysaccharides were evaluated by HPSEC and compared with globular proteins of known relative molecular mass. The two third-degree polynomial regression curves for proteins and glycosaminoglycans have different coefficients and the columns present different exclusion limits. In particular, under the experimental conditions, the M_r exclusion limits for high M_r are 44 000 for glycosaminoglycans and 240 000 for globular proteins. In contrast, the behaviours of these two classes of macromolecules are similar for lower M_r. In fact, the two third-degree polynomial curves show the same regression below about M_r = 1000. The behaviour in HPSEC is discussed in relation to the different steric conformations for proteins and glycosaminoglycans with different relative molecular masses.     

Behavior of γ-ray-irradiated pullulan in aqueous solutions of cationic (cetyltrimethylammonium hydroxide) and anionic (sodium dodecyl sulfate) surfactants

 γ-ray-irradiated pullulan macromolecules acquire properties of an anionic polyelectrolyte and, upon aggregation with the oppositely charged surfactant cetyltrimethylammonium hydroxide, are found to precipitate according to their molecular weight. This provides a convenient means for obtaining polymer fractions with a narrower molecular-weight distribution than those of the original samples. The method can be employed to obtain fractions of radiation-modified pullulan required in the production of a blood-plasma substitute. Anionic properties of γ-ray-irradiated pullulan also manifest themselves in interactions with sodium dodecyl sulfate (SDS) in aqueous solution, which result in a significant change in the viscous behavior of the polysaccharide. Upon an increase in the concentration of γ-ray-irradiated pullulan in an SDS solution, the reduced viscosity of the polymer first increases and, upon reaching a certain concentration, C*, decreases. The C* values were found to be dependent on the molecular weight of the polymer. The phenomena observed are discussed in terms of the general theory of polymer solutions within which C* is treated as a critical concentration at which interpenetration of polymer molecules becomes important. Unperturbed dimensions of γ-ray-irradiated pullulan macromolecules were estimated on the basis of experimental viscosimetric data. Received: 29 March 2001 Accepted: 31 July 2001     

Refolding and simultaneous purification of recombinant human proinsulin from inclusion bodies on protein‐folding liquid‐chromatography columns

Protein‐folding liquid chromatography (PFLC) is an effective and scalable method for protein renaturation with simultaneous purification. However, it has been a challenge to fully refold inclusion bodies in a PFLC column. In this work, refolding with simultaneous purification of recombinant human proinsulin (rhPI) from inclusion bodies from Escherichia coli were investigated using the surface of stationary phases in immobilized metal ion affinity chromatography (IMAC) and high‐performance size‐exclusion chromatography (HPSEC). The results indicated that both the ligand structure on the surface of the stationary phase and the composition of the mobile phase (elution buffer) influenced refolding of rhPI. Under optimized chromatographic conditions, the mass recoveries of IMAC column and HPSEC column were 77.8 and 56.8% with purifies of 97.6 and 93.7%, respectively. These results also indicated that the IMAC column fails to refold rhPI, and the HPSEC column enables efficient refolding of rhPI with a low‐urea gradient‐elution method. The refolded rhPI was characterized by circular dichroism spectroscopy. The molecular weight of the converted human insulin was further confirmed with SDS–18% PAGE, Matrix‐Assisted Laser Desorption/ Ionization Time of Flight Mass Spectrometry (MALDI‐TOF‐MS) and the biological activity assay by HP‐RPLC. Copyright © 2014 John Wiley & Sons, Ltd.     

酪蛋白酶解反应复杂产物的色谱定量分析

根据酪蛋白酶解产物的高效凝胶排阻色谱(HPSEC)定性分析结果,选取不同截留相对分子质量的超滤膜对酶解产物进行截分,制得3种相对分子质量分布相对集中的区间组分;建立各组分峰面积与质量浓度之间的线性关系,由此定量计算不同反应时间的酶解产物中相应相对分子质量区间组分的质量浓度。研究表明,将膜分离方法与色谱分析相结合可实现对蛋白质、多肽等复杂体系相对精确的定量分析。     

Enhancement of pullulan production by aureobasidium pullulans in batch culture using olive oil and sucrose as carbon sources

The production of pigment-free pullulan byAureobasidium pullulans, using olive oil and sucrose as carbon (C) sources, in shake flasks, was investigated. Optimum medium composition for pullulan elaboration was 80 g/L sucrose, 25 mL/L olive oil, 5 mL/L Tween-80, 10 g/L glutamic acid, and an initial pH of 5.5. Maximum pullulan concentration (51.5 g/L), productivity (8.6 g/L·d), and yield (80.3%) were achieved under these conditions after 120 h of fermentation. The principal advantage of using olive oil and sucrose simultaneously as C sources was the elimination of the inhibitory effect of high sucrose concentrations (> 60 g/L) on pullulan production by the microorganism. Structural characterization by¹³C-NMR, monosaccharide, and methylation analyses, and pullulanase digestion, combined with size-exclusion chromatography, confirmed the identity of pullulan and the homogeneity of the released polysaccharide in the fermentation broths. There were no significant differences in structure between pullulan samples isolated from either olive oil-supplemented media or olive oil-free media. The molecular size of pullulan from the combined olive oil-sucrose fermentation was slightly lower (1.1 X 10⁶) than that of conventional fermentation with sucrose as a single C source (1.4 X 10⁶). Lowering the initial pH of the medium resulted in increased molecular size for the released polymer, but a lower pullulan yield.     

杜氏盐藻多糖的高效体积排阻色谱的保留特性及其分析方法的研究

通过对从杜氏盐藻中提取出的不同多糖级分在高效体积排阻色谱柱(Waters Ultrahydragel Linear,7.8 mm i.d.×300 mm,2根串联)上的保留特性的考察及其分离分析条件的优化,建立了高效体积排阻色谱分析盐藻多糖平均相对分子质量及其分布的方法。结果表明:流动相中盐的种类及其浓度、pH值对3种酸性多糖级分(特别是硫酸化多糖级分PD4a)的保留行为有显著影响;在柱温为45 ℃,流速为0.9 mL/min条件下,使用0.1 mol/L的NaAc水溶液作流动相基本上能消除非特异性吸附作用及分子间缔合等因素的干扰,使各多糖级分基本以非缔合状态按立体排除机制保留和分离。在优化的色谱条件下,测得的盐藻多糖5个级分的重均相对分子质量(Mw)分别为1548000,33000,67000,424000,10000;测得的硫酸化多糖级分PD4a的Mw和峰面积的相对标准偏差分别为1.7%和 0.88%(n=5)。     

Optimization of conditions for high-performance size-exclusion chromatography of different soil humic acids.

A method of high-performance size-exclusion chromatography (HPSEC) for a wide variety of soil humic acids (HAs) was developed. Two types of soil HAs (Cambisol and Andosol HAs), which have substantially different chemical properties, showed different effects of salt and organic solvent concentrations in the eluent on chromatograms. A Shodex OHpak SB-805 HQ column with 10 mM sodium phosphate buffer (pH 7.0) containing 25% of acetonitrile (v/v) was found to be applicable for different HAs, and showed high reproducibility and recovery (87.0 - 94.5%). The Cambisol HA was fractionated into five fractions using an ultrafiltration with different molecular-weight cut-offs. The order of the molecular weights of the five fractions calculated from the HPSEC analysis corresponded to that defined by ultrafiltration. This supported the reliability of the method.