Preparation of the stabilized glycoenzymes by cross-linking their carbohydrate chains

Each of the three high-mannose type glycoproteins studied, acid phosphatase, invertase, and glucose oxidase, could be specifically cross-linked through its carbohydrate chains. The procedure involves periodate oxidation of carbohydrate residues followed by reaction of the generated aldehyde groups with adipic acid dihydrazide as a cross-linker. The amount and size as well as solubility of the formed polymers could be efficiently controlled by varying the reaction conditions, i.e., the oxidation degree and the concentrations of glycoproteins, cross-linker, and hydrogen ions during the cross-linking reaction. It was found that the quantity and size of polymers increased with oxidation degree and protein concentration and by lowering the pH. When the protein concentration was above and pH below certain values, depending on the glycoenzyme, insoluble polymers formed. The soluble cross-linked polymers retained a high level of original activity, and the minor decrease in specific activity noticed was shown to occur during the periodate oxidation step. The cross-linked glycoenzymes are much more resistant to denaturation by high temperature and by changes in pH, demonstrating the usefulness of this method in preparation of the stabilized glycoprotein derivatives.     

Increased selectivity in the detection of glycoproteins on nitrocellulose membranes by washing with sodium hydroxide solution.

We increased selectivity in the detection of glycoproteins on nitrocellulose membranes by introducing a washing step using sodium hydroxide solution. Glycoproteins on the nitrocellulose membrane were first oxidized by sodium periodate; biotin hydrazide was then coupled to the aldehyde groups generated in the sugar moiety of the glycoproteins. The membrane was washed twice using sodium hydroxide solution, and avidin-horseradish peroxidase was then coupled to the remaining biotin. This system allows the detection of nanograms of glycoproteins on nitrocellulose membranes, and its specificity allows the clear distinction of glycoproteins from the nonglycosylated protein of bovine serum albumin.     

Ionic liquid matrices for MALDI-TOF-MS analysis of intact glycoproteins

2,5-Dihydroxybenzoic acid (DHB) has been demonstrated to be a more suitable matrix than 3,5-dimethoxy-4-hydroxycinnamic acid (sinapinic acid, SA) to obtain reliable molecular mass values of intact glycoproteins because it prevents sugar fragmentation. Lack of spot homogeneity during the crystallization step was prevented by drying the sample-matrix mixture under vacuum conditions. Nevertheless, this sample-matrix preparation procedure requires a specific experimental setup and may be time-consuming. In this work, we investigated the effectiveness of different ionic liquid matrices (ILMs) with SA and DHB on the ionization of a set of intact glycoproteins with several degrees of glycosylation. The obtained results demonstrate that some of the tested ILMs allow detection of the studied intact glycoproteins. Furthermore, the selected optimum conditions solve the reproducibility issue of using the DHB as a solid matrix without the vacuum drying method and, surprisingly, avoid sugar fragmentation when both SA and DHB were used as ILMs.     

Microscale analysis of mucin-type O-glycans by a coordinated fluorophore-assisted carbohydrate electrophoresis and mass spectrometry approach

The total glycan moiety was released in a single step from native glycoproteins by a nonreductive beta-elimination procedure. The generated oligosaccharides were further derivatized either with the hydrophobic fluorophore 2-aminoacridone (AMAC) or the charged 8-aminonaphthalene-1,3,6-trisulfonic acid (ANTS) fluorophore, and the resulting fluorescent derivatives were separated according to their hydrodynamic size or charge with high-resolution gel electrophoresis. Both N- and O-glycans released by this beta-elimination procedure might be analyzed simultaneously. AMAC derivatization allows a rapid separation of neutral and charged oligosaccharides without prior fractionation. Derivatized oligosaccharide species were then eluted from the gel slices and analyzed by mass spectrometry. This methodology allowed the rapid structural characterization of each glycan in term of monosaccharide composition and sequence. Using this technique we were able to screen several heterogeneous O-glycan mixtures isolated at the picomolar range from reference glycoproteins or mucins.     

Matrix-assisted laser desorption/ionization on-target method for the investigation of oligosaccharides and glycosylation sites in glycopeptides and glycoproteins

The significance of glycoproteins in living systems instigates the ceaseless expansion of new techniques and procedures for the analysis of biological samples. Many of these applications are focused on improving the detection limit of analyzed material. In a previous study, we described a procedure for the detection of oligosaccharides cleaved from tryptic glycopeptides. Treatment of deglycosylated fractions with phenylhydrazine gave rise to peaks consistent with labeled glycans, and both types of compounds--deglycosylated peptides and oligosaccharides--were recorded from one spot and observed in one matrix-assisted laser desorption/ionization (MALDI) mass spectrum for the first time. Here, we added an additional step to this simple procedure of deglycosylating glycopeptides directly from the target spot of the first analyzed glycosylated peptides. For the purpose of this new study, a mixture of 2-aza-2-thiothymine and phenylhydrazine hydrochloride showed to be an excellent matrix for glycopeptides, oligosaccharides, deglycosylated peptides and moreover it allowed PNGaseF to be active enough to cleave oligosaccharides from peptides. The efficiency of this procedure is demonstrated on a series of intact glycoproteins and on the analysis of tryptic peptides obtained from IgG and total mouse serum. This one-step on-target deglycosylation method with subsequent derivatization on the same spot makes MALDI-MS analyses of glycopeptides fast, simple and accessible for biological samples, where classical procedures cannot produce useful results.     

Significant immunological cross-reactivity of plant glycoproteins

Plant glycoproteins generally cross-react because of the presence of identical or related complex glycans which are highly immunogenic. The use of mild periodate oxidation of glycans after glycoprotein transfer from sodium dodecyl sulfate-polyacrylamide gel electrophoresis gels to nitrocellulose membranes prior to immunodetection is a way of identifying the carbohydrate antigenic determinants of a glycoprotein as the basis for antigenic cross-reaction. Periodate oxidation can distinguish between antibodies directed against carbohydrate and against peptide antigenic determinants, the latter being unaffected by oxidation. Immunoblotting performed after periodate treatment allows the detection of common protein epitopes.     

Spectrophotometric determination of periodate or iodate ions by liquid-liquid extraction as an ion-pair using tetramethylammonium iodide

A simple and accurate extractive Spectrophotometric procedure was developed for the microdetermination of periodate and iodate in aqueous media. The determination of periodate was based upon the extraction of the ion-pair formed between the periodate and tetramethylammonium iodide at pH 4 in chloroform followed by direct Spectrophotometric measurements at 509, 358 and 288 nm. The optimum concentration range evaluated by Ringbom's plot, the molar absorptivity, the Sandell's sensitivity and the stoichiometry of the formed ion-pair were critically determined. Iodate could be determined quantitively by the proposed procedure after oxidation to periodate with potassium persulphate. The effect of the diverse ions on the determination of the periodate and/or iodate by the proposed procedures was also investigated. The application of the method for the analysis of iodate or periodate in the artificial fresh water was successfully carried out.     

Improved conditions for periodate/Schiff's base‐based fluorescent staining of glycoproteins with dansylhydrazine in SDS‐PAGE

An improved periodate/Schiff's base based fluorescent stain with dansylhydrazine (DH) for glycoproteins in 1D and 2D SDS‐PAGE was described. Down to 4–8 ng of glycoproteins can be selectively detected within 2 h, which is approximately 16‐fold higher than that of original protocol, but similar to that of Pro‐Q Emerald 488 stain (Invitrogen, Carlsbad, USA). Furthermore, subsequent study of deglycosylation, glycoprotein affinity isolation, and LC‐MS/MS analysis were performed to confirm the specificity of the improved method. As a result, improved DH stain may provide a new choice for selective, economic, MS compatible, and convenient visualization of gel‐separated glycoproteins.     

An improved radiochemical neutron activation analysis procedure for trace mercury

Summary Radiochemical neutron activation analysis has proven to be a powerful tool for measuring trace mercury in a variety of materials. In a modification of an established NIST method, selenium interfering with the ²⁰³Hg indicator is removed by precipitating mercury as periodate, and the chemical yield is measured gravimetrically. The current method is better suited to multiple samples, less subject to explosion during the combustion step, provides a measurement of the yield for each sample, and involves less radiation exposure to personnel. The procedure has been applied to the certification of mercury in SRMs 1575a Pine Needles, 1632c Bituminous Coal, and 2702 Marine Sediment.     

A simplified synthesis of polymeric nonparticulate stationary phases with macrocyclic antibiotic as chiral selector for capillary electrochromatography

A simplified approach to synthesize nonparticulate (continuous or monolithic) beds with embedded vancomycin chiral selectors for capillary electrochromatography is proposed. In the present approach, N,N'-diallyltartardiamide monomer with diol functionality is used, which can be readily converted to aldehyde groups via periodate treatment. Parallel to the activation of the polymeric matrix for covalent attachment of vancomycin, the periodate treatment has shown secondary effects on the polymeric bed morphology, namely the increase of the average pore size and porosity of the skeleton. Inversed size-exclusion chromatography was applied to characterize porosimetric properties of the capillary columns before and after the periodate treatment. Electroosmotic and enantioselective properties of the nonparticulate beds synthesized are presented. The approach is of more general interest attaching different affinity groups to the polymeric matrix and/or enhancing the accessibility to the active sites, for instance, in the molecular imprinting technique.     

The influence of composition and porosity on the magnetic properties of FeCo-SiO2 nanocomposite aerogels

FeCo-SiO2 aerogel nanocomposites with different porosity were obtained using two different sol-gel procedures: the first involves a single acidic step and gives rise to relatively dense aerogels while the second procedure allows one to obtain highly porous aerogels using urea in the second step to promote fast gelation. Samples with different loading of FeCo equimolar alloy and with different Fe : Co ratios were prepared. The magnetic properties of all the nanocomposite aerogels were extensively studied as a function of porosity and composition. Particular attention was paid to the role played by the interparticle interactions, which are mediated by the silica matrix, in determining the collective magnetic behaviour. The kind and strength of magnetic interactions are affected by both the composition and the porosity of the matrix.     

Highly Selective Photometric Method for the Determination of Periodate

ABSTRACT

A simple and selective photometric procedure was developed for the micro-determination of periodate in aqueous media. The method is based on the reaction of periodate with Gallocyanine at pH = 4.8. The reaction was monitored photometrically by measuring the absorbance of the reaction mixture at 620 nm. The effects of reagent concentration, temperature and influence of other species for the determinations of periodate were investigated. Periodate can be determined in the range of 0.02-2.20 μg/ml, with a relative standard deviation of 1.96% for ten replicate measurements of 0.13 μg/ml periodate. Periodate can be determined in the presence of iodate or iodide.     

非缓冲介质中硫脲氧化的非线性动力学

研究了在非缓冲介质中高碘酸盐氧化硫脲的复杂反应动力学。实验结果表明：高碘酸盐氧化硫脲的非线性反应不但呈现多种不同的化学计量方程式,而且体系的pH、[I-]、[I2]及Pt电极电位呈现封闭条件下的准振荡和单峰振荡以及开放条件下的双稳态和衰减振荡行为。综合考虑硫价态与碘价态变化的各自非线性过程及相互耦合,提出了包含质子快速预平衡反应、碘化合物自身反应、碘化合物-硫化合物反应以及硫－硫反应的12步反应机理,模拟出了封闭体系中pH、[I-]以及[I2]的准振荡和单峰振荡以及开放体系中的双稳态行为。     

Boronic acid functionalized fibrous cellulose for the selective enrichment of glycopeptides

Enrichment of glycoproteins has been important because of their dynamicity and role in biological systems. Study of glycoproteins is complex because of the simultaneous glycosylation and deglycosylation inside the body. Often employed affinities for glycopeptides are hydrazide, boronic acid, or physiosorbed lectin on support materials. Cellulose, a natural polysaccharide, has rich surface chemistry, stable structure, low cost and availability in different variants. In present study, fibrous cellulose is oxidized using periodate to modify with boronic acid. Attachment of boronic acid is confirmed by Fourier transform infrared spectroscopy. Particle size and morphology of boronic acid@fibrous cellulose is studied by scanning electron microscopy. The enrichment efficiency is evaluated by using horseradish peroxidase as model protein. Boronic acid@fibrous cellulose is selective up to 1:250 for spiked horseradish peroxidase in bovine serum albumin digest, sensitive down to 0.1 femtomol and recovering 88.15% glycopeptides. Moreover, protein binding capacity is determined as 213 mg/g and 41% sequence coverage of horseradish peroxidase protein with all eight glycosylation sites detected. Total of 18 glycopeptides are enriched from immunoglobulin digest showing ability of boronic acid@fibrous cellulose to enrich glycoproteins from multiglycoforms. Enrichment from human serum recovers 18% extracellular and 72% secreted glycoproteins via bottom‐up approach and online tools.     

Simultaneous kinetic spectrophotometric determination of periodate and iodate based on their reaction with pyrogallol red in acidic media by chemometrics methods

The univariate and multivariate calibration methods were applied for the simultaneous determination of iodate and periodate in water. The method is based on the reaction of periodate and iodate with pyrogallol red in sulfuric acid media. The reaction was monitored spectrophotometrically by measuring the decrease in absorbance of pyrogallol red at 470 nm. The calibration curve was linear over the concentration ranges of 0.1-12 and 0.1-14 μg ml⁻¹ for iodate and periodate, respectively. The experimental calibration matrix for partial least squares (PLS) and orthogonal signal correction (OSC-PLS) method was designed with 35 mixtures. The results obtained by the PLS and OSC-PLS were statistically compared. The effects of various cations and anions on iodate and periodate determination have been investigated.     

Determination of iodate and periodate at the microgram level by a kinetic method

A procedure is reported for the kinetic determination of iodate/periodate mixtures based on the reduction of these anions by the iron(II)/dipyridylglyoxal dithiosemicarbazone complex in an acidic medium. The reaction is monitored spectrophotometrically at 410 nm (absorption maximum of the iron(III) complex formed). Mixtures of these anions at μg ml^?1 levels for iodate/periodate ratios from 5:1 to 1:4 can be determined with a r.s.d, of ca. 3%. Molybdate is used to mask periodate to allow iodate to be determined alone. The sum of both anions is obtained in the absence of molybdate. Chromate, hypochlorite and hexacyanoferrate(III) interfere seriously.     

Discussion of parameters associated with the determination of arsenic by electrothermal atomic absorption spectrometry in slurried environmental samples

A slurry sampling-fast program procedure has been developed for the determination of arsenic in plants, soils and sediments by electrothermal atomic absorption spectrometry. Efficiencies of various single and mixed modifiers for thermal stabilization of arsenic and for a better removal of the matrix during pyrolysis step were compared. The influence of the slurry concentration, amounts of modifier and parameters of the pyrolysis step on the As integrated absorbance signals have been studied and a comparison between fast and conventional furnace programs was also made. The ultrasonic agitation of the slurry followed by a fast electrothermal program using an Ir/Mg modifier provides the most consistent performance in terms of precision and accuracy. The reliability of the whole procedure has been compared with results obtained after application of a wet digestion method with an HF step and validated by analyzing eleven certified reference materials. Arsenic detection and quantitation limits expressed on dry sample matter were about 30 and 100 micrograms kg-1, respectively.     

Barley cultivar discrimination: I. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis and glycoprotein blotting.

Two different methods of detecting electroblotted glycoproteins after sodium dodecyl sulfate-polyacrylamide gel electrophoresis of Tris-buffer soluble barley seed proteins were examined for their applicability for barley cultivar discrimination. These are the highly specific, lectin-based concanavalin A/peroxidase method and the more general periodate/danyslhydrazine method. The results of the periodate/dansylhydrazine method enabled us to divide the 20 examined cultivars into three groups, whereas the more sensitive concanavalin A/peroxidase method revealed six different glycoprotein patterns. In comparison, sodium dodecyl sulfate-polyacrylamide gel electrophoresis and silver staining of the alcohol-soluble barley seed proteins (hordeins) gave nine different banding patterns. A combination of hordein electrophoresis together with glycoprotein staining by the concanavalin A/peroxidase method made it possible to classify the cultivars into twelve groups, the largest of which contained four cultivars. The qualitative expression of the glycoprotein patterns seemed to be independent of growth conditions, whereas the band intensities obviously were not. As a whole, glycoprotein blotting is a valuable supplement to sodium dodecyl sulfate-polyacrylamide gel electrophoresis of hordeins in barley cultivar discrimination.     

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