多原子分子力场的模型势函法与MNDO,MINDO／3方法的研究

用量子力学方法获得分子的模型力场现已占有很重要的位置.然而由于理论上很难获得体系高精度解析势能面,使力场的理论计算遇到了困难.直到Pulay提出梯度法后,量子化学方法才被广泛用于多原子分子的振动分析.但由于该方法采用数值微分通过能量的第二阶导数所获得的力场矩阵对角元误差很大,需将其伸缩、变角对角力常数分别扣除10％、20％,才能获得与观测值相近的结果;且ab initio计算花机时太多,应用于大分子计算存在一定的困难.为此本文把前文提出的确定力常数的模型势函法与MNDO、MINDO/3等半经验方法结合起来,构造多原子分子的力场,并用于振动分析,获得了满意的结果.     

用升降算符法计算多原子分子振动-转动能级

自70年代起,Handy^[1]等,用变分法计算了H₂、SO₂等分子的振动-转动光谱,所得结果与实验吻合。但因在于计算久期行列式元素的积分,其计算方法不易推广。     

Anharmonic Force Fields and Perturbation Theory in the Interpretation of Vibrational Spectra of Polyatomic Molecules

The problem of describing real vibrational spectra of large molecules in terms of perturbation theory is considered. Equations necessary for presenting theoretical anharmonic force fields in various coordinate systems (Cartesian, normal, and internal curvilinear) are discussed. A review of second-order perturbation theory equations necessary for calculating certain spectroscopic values (anharmonicity constants, rotational-vibrational interaction, etc.) is given. A scheme for including resonances based on the construction of the interaction matrix between vibrational transitions of various types is described. This scheme can be used as a basis for anharmonic calculations of vibrations of medium-sized molecules.     

多光子电离伴随的碎片化过程的速率方程分析

提出一个描述多原子分子多光子激发、电离和离子再被激发过程的布局速率方程模型，并且得到电离效率和离子体系吸收的平均能量＜E＞的代数解．通过计算这两个量与光强的关系，分析了不同电离机制下，多原子分子多光子电离实验中伴随的碎片化过程的控制性问题．结果表明只有采用1＋1电离方案，可以通过控制电离激光的强度来实现“软电离”和“硬解离”．采用3＋1电离，即使在单离子条件下，离子的＜E＞已高达20－30eV，远超过离子的解离阈值，特别是增加光强时，＜E＞的增加速度比电离效率增加得快，因此一般条件下不能让分子有效电离而不使其离子解离．上面的分析可以圆满解释呋喃等分子在3＋1电离时观察不到母体离子这个实验事实．     

Concepts of Trapping Topologically by Shell Molecules

Concepts of the synthesis of shell topological compounds, which consist of a guest molecule (or molecules) trapped by a host molecule with a spacial, egg shell-like structure are discussed. Generally, both constructing the shell molecule in the presence of a guest molecule and constructing the guest molecule in the presence of the shell (host) are ways to “shell” topological compounds. The preparation of shell molecules may consist of the completion of “preshell” molecules or of obtaining cascade branched oligomers and polymers. Cyclodextrins and substances like triquinance are considered to play a role in preshell molecules. Shell molecules may also be obtained by polyreaction of a monomer of the XRY_n type, which results in a cascade branched molecule of shell structure (spherical form). When the polyreaction is continued, the cascade branched molecule becomes a “cast” one. It is theoretically possible to enclose a guest molecule inside the shell during the cascade branching process if there is a good solvent (of high expansion coefficient value) in respect to the growing branches. A spacially developed molecule of both “empty” and “cast” structure may be obtained also by the known “step by step” cascade branching process which involves, for instance, a repeated cyanoethylation-reduction reaction.     

Control of Chemical Reactions by Using Molecules that Buffer Non-aqueous Solutions

Control of chemical reactions is necessary to obtain designer chemical transformation products and for preventing decomposition and isomerization reactions of compounds of interest. For the control of chemical events in aqueous solutions, the use of aqueous buffers is a common practice. However, no molecules that buffer non-aqueous solutions were commonly used. Herein, we demonstrate that 1,3-cyclohexanedione derivatives have buffering functions in non-aqueous solutions. It was also shown that these molecules can be utilized to alter and control chemical reactions. 1,3-Cyclohexanedione derivatives inhibited both acid- and base-catalyzed isomerizations and decompositions in organic solvents. The reaction products obtained in the presence of the buffering molecule 2-methyl-1,3-cyclohexanedione differed from those obtained in the absence of the buffering molecule. The use of buffering molecules that work in organic solvents provides a strategy to control chemical reactions and expands the range of compounds that can be synthesized.     

Theoretical Analysis on Magnetic Properties of Conjugated Organic Molecules Containing Borepin

Theoretical study about the magnetic properties of conjugated organic molecules containing borepin with π current density was carried out. 1-(2,4,6-Trimethylphenyl)borepin moiety is the center and other different groups are situated on the both β sides, which are named molecules 1-12 as theoretical model in order to establish the relationship between aromaticity and geometry variation of borepin. The optimized molecular structures of molecules 1-12 are almost keeping planar and the C2-C3 bond length of borepin turns longer from molecule 1 to molecule 12. Different borepin-annulated ring could change the conjugated effect of π-electron between borepin and these borepin-annulated rings. Moreover, the molecule presents antiaromaticity, in other words, the molecule became unstable when the C2-C3 bond length of borepin extended more than ca. 0.1417 nm. But the β position fragment and substituent groups of borepin are not affected in this case, they are still steady. However, the central borepin ring current is counteracted by symmetrical overlap of it with affiliated borepin-annulated ring current. Hence, the central borepin ring breaking would be liable to occur. These molecules have higher vertical ionization potentials(VIPs) and lower vertical electron affinities(VEAs), which suggests that these molecules could easily exist in anionic form.     

Semiempirical Analysis of the Homolytic Decomposition of Peresters with the Concerted Cleavage of Two Bonds

The parabolic model of a bimolecular reaction is modified to study the monomolecular decomposition of molecules into radicals by the cleavage of several bonds. Together with the oscillation model of molecule decomposition with the concerted cleavage of several bonds, this model is used to analyze the kinetic data on the decomposition of 16 peresters with the simultaneous cleavage of C–C and O–O bonds. Parameters characterizing this decomposition are obtained and multiple variants in representing such decomposition in terms of the parabolic model are discussed.     

Acceleration of Correlation-corrected Vibrational Self-consistent Field Calculation Times for Large Polyatomic Molecules

Acceleration of the correlation-corrected Vibrational self-consistent field (CC-VSCF) method for anharmonic calculations of vibrational states of polyatomic molecules is described. The acceleration assumes pairwise additive interactions between different normal modes, and employs orthogonality of the single-mode vibrational wavefunctions. This greatly reduces the effort in computing correlation effects between different vibrational modes, which is treated by second order perturbation theory in CC-VSCF. The acceleration can improve the scaling of the overall computational effort from N ⁶ to N ⁴, where N is the number of vibrational modes. Sample calculation times, using semi-empirical potential surfaces (PM3), are given for a series of glycine peptides. Large computational acceleration, and significant reduction of the scaling of the effort with system size, is found and discussed.     

Fast Reactions of Atom Substitution from Polyatomic Molecules and Solid Salts by Thermally Equilibrated Atomic Reactants

A new class of fast thermal gas-phase reactions of the direct substitution of atoms in polyatomic molecules by atomic reactants is discovered. The Arrhenius parameters are determined for the reactions of atomic deuterium with a number of hydrogen-containing compounds, occurring via the direct substitution of hydrogen atoms and via the abstraction of hydrogen atoms. Fast substitution of alkali metal atoms from the crystals of their salts for the reaction chain carriers of hydrogen flames is found. The importance of reactions of these types in chain combustion is demonstrated. The kinetic isotope effects of hydrogen atom abstraction from hydrocarbon molecules by hydrogen and deuterium atoms are studied. A method for the kinetic studies of free atoms and radicals is developed, which takes into account the role of longitudinal diffusion in the jet and does not require the knowledge of the concentrations of atoms and radicals or the rate constants of other reactions.     

Adsorption of Chain Molecules

We analyze the influence of chain length on the adsorption isotherm using the framework of lattice theory. Each molecule is represented as a chain of segments occupying separate sites in the lattice. Adsorption equilibria (particularly adsorption isotherms) are analyzed for one-component and two-component mixtures of chain molecules. Copyright 1999 Academic Press.     

Elastic Scattering of fast Electrons by Highly Polar Molecules

In this paper, peculiarities are considered of the angular dependence of the intensity of elastic scattering of fast electrons by dipolar LiH molecules, calculated in the isst Born approximation using Ransil's wavefunction. The molecular component of the scattering intensity is determined. lt is shown that the contribution of chemical bond effects to the intensity of electron scattering by molecules featuring highly polar bonds includes the part which is formally analogous to the structure dependent part of the intensity. Numerical integration of the Fourier transform of the molecular electron density was utilized to calculate the intensity of elastic electron scattering by LIH, LiF and LhO molecules, using HartreeùFock molecular wavefunctions. The major portion of the contribution of chemical bond effects to the intensity of electron scattering by the highly polar (ionic) LiF and Li20 molecules is made up by the ǒioniǒ contribution due to a redistribution of electrons between atoms making up an ionic molecule. A model is suggested of independent ions in a molecule, which correctly describes the “ionic” contribution of chemical bond effects to the intensity of electron scattering by highly polar molecules and is suitable for practical utilization for interpreting electron-diffraction patterns.     

Efficient Separation of Hydrophobic Molecules by Molecularly Imprinted Cyclodextrin Polymers

Cyclodextrins were cross-linked with toluene 2,4-diisocyanate in dimethyl sufoxide in the presence of hydrophobic biomolecules as templates, and the imprinted polymers were applied to the stationary phases of high performance liquid chromatography. Molecular imprinting efficiently promoted the binding-affinity and substrate-selectivity towards the template molecule, compared with the control polymers prepared in their absence. When cholesterol (template molecule) was complexed with cyclodextrins prior to the polymerization, for example, the imprinted polymer retained cholesterol more strongly than other steroids. Upon the polymerization without a template molecule, the binding towards steroids was much weaker. Besides steroids, imprinting was effective for various hydrophobic and rigid template molecules. Since binding of the guest molecule was based on inclusion complex formation with cyclodextrins, separation could be achieved in the solvents containing water. These polymeric receptors are also applicable to selective recognition of biologically important molecules or removal of toxic molecules from aqueous media. Thus, imprinting of cyclodextrins is useful for the preparation of synthetic tailor-made receptors for various kinds of hydrophobic guest molecules.     

High Spin and Anisotropic Molecules Based on Polycyanometalate Chemistry

 This paper points out some recent achievements in the chemistry and physics of high spin and anisotropic molecules based on polycyanometalate complexes. Following a step by step synthetic strategy and using a localized electron orbital model, isotropic high spin molecules were obtained with ground spin states ranging from S = 9/2 to 27/2. In the same way, anisotropic molecules with various nuclearities (bi, tri, tetra, hexa, and hepta-nuclear complexes) have been synthesized. Mixing these two approaches, it has been possible to obtained anisotropic high spin molecules that behave as single molecule magnets. The paper reviews some of the steps that lead to these findings and some of the prospects opened in the field of single molecule magnets.     

The Effect of Vibrational Excitation of Molecules on Plasmachemical Reactions Involving Methane and Nitrogen

An experimental study of plasmachemical reaction involving CH₄ and N₂ molecules in rf discharge was studied in order to know the effect of vibrational excitation of N₂ molecules. When the relative nitrogen concentration was greater than 0.8, the main product of CH₄ decomposition was HCN, and the rate of methane decomposition at this condition was faster than that one in pure methane. These results could be confirmed through the mass spectroscopic method. The reason for these results is the vibrational energy of N₂ excited by rf discharge. The chain reaction mechanisms of producing HCN by vibrational excitation of N₂ were examined closely through numerical simulation. The rate-controlling step was the dissociation reaction of excited nitrogen molecule to the atomic nitrogen, so the process of HCN synthesis was limited by the value of reaction constant, k^N.     

常见客体分子对笼型水合物晶格常数的影响

Natural gas hydrates are considered as ideal alternative energy resources for the future, and the relevant basic and applied research has become more attractive in recent years. The influence of guest molecules on the hydrate crystal lattice parameters is of great significances to the understanding of hydrate structural characteristics, hydrate formation/decomposition mechanisms, and phase stability behaviors. In this study, we test a series of artificial hydrate samples containing different guest molecules (e.g. methane, ethane, propane, iso-butane, carbon dioxide, tetrahydrofuran, methane + 2, 2-dimethylbutane, and methane + methyl cyclohexane) by a low-temperature powder X-ray diffraction (PXRD). Results show that PXRD effectively elucidates structural characteristics of the natural gas hydrate samples, including crystal lattice parameters and structure types. The relationships between guest molecule sizes and crystal lattice parameters reveal that different guest molecules have different controlling behaviors on the hydrate types and crystal lattice constants. First, a positive correlation between the lattice constants and the van der Waals diameters of homologous hydrocarbon gases was observed in the single-guest-component hydrates. Small hydrocarbon homologous gases, such as methane and ethane, tended to form sI hydrates, whereas relatively larger molecules, such as propane and iso-butane, generated sⅡ hydrates. The hydrate crystal lattice constants increased with increasing guest molecule size. The types of hydrates composed of oxygen-containing guest molecules (such as CO₂ and THF) were also controlled by the van der Waals diameters. However, no positive correlation between the lattice constants and the van der Waals diameters of guest molecules in hydrocarbon hydrates was observed for CO₂ hydrate and THF hydrate, probably due to the special interactions between the guest oxygen atoms and hydrate "cages". Furthermore, the influences of the macromolecules and auxiliary small molecules on the lengths of the different crystal axes of the sH hydrates showed inverse trends. Compared to the methane + 2, 2-dimethylbutane hydrate sample, the length of the a-axis direction of the methane + methyl cyclohexane hydrate sample was slightly smaller, whereas the length of the c-axis direction was slightly longer. The crystal a-axis length of the sH hydrate sample formed with nitrogen molecules was slightly longer, whereas the c-axis was shorter than that of the methane + 2, 2-dimethylbutane hydrate sample at the same temperature.     

On Feasibility of “Spectroscopic” Calculations of XH Bond Dissociation Energies for Polyatomic Molecules from Fundamental Vibration Frequencies Using the Anharmonic Molecular Model

This paper discusses the applicability of the variational technique using a minimal Morse-harmonic basis set to calculations of the fundamental spectrum and the potential function parameters for polyatomic molecules. The potential function is assumed to be the sum of the Morse function for XH bonds and the harmonic function for the skeletal and deformation vibrations. The initial approximation for the potential function is found by ab initio calculations and refined by solving the inverse mechanical problem (selecting the scaling indices). The thus selected harmonic part of the potential function gives equally good agreement between the experimental and calculated transition frequencies in both harmonic and anharmonic approximations. The anharmonic (Morse) term of the potential function (bond dissociation energy) is selected by solving the inverse mechanical problem until the best agreement between the experimental and calculated CH bond stretching frequencies has been achieved. Problem solving ends with the construction of a transmission curve in the IR spectrum. Variations of the dipole moment of the molecule induced by vibrations are found by ab initio calculations.     

多原子体系非绝热动力学的近似理论方法

非绝热动力学普遍存在于光物理和光化学过程中。描述非绝热跃迁需要处理电子-原子核间的相互耦合运动。由于计算量随体系尺度增大剧烈增长,准确的量子动力学计算目前只适用于描述小分子体系。为了研究多原子分子体系的非绝热过程,近年来发展了一些基于量子-经典动力学近似方法。本文将对典型的这类方法包括经典Ehrenfest方法、面跳跃方法、基于Wigner表示的混合量子-经典方法进行简要的介绍,并讨论如何将量子-经典动力学方法与电子结构从头算手段相结合,模拟非绝热过程。重点阐明各种方法的基本思想和优缺点,并对该领域的发展进行展望。     

High Spin and Anisotropic Molecules Based on Polycyanometalate Chemistry

 This paper points out some recent achievements in the chemistry and physics of high spin and anisotropic molecules based on polycyanometalate complexes. Following a step by step synthetic strategy and using a localized electron orbital model, isotropic high spin molecules were obtained with ground spin states ranging from S = 9/2 to 27/2. In the same way, anisotropic molecules with various nuclearities (bi, tri, tetra, hexa, and hepta-nuclear complexes) have been synthesized. Mixing these two approaches, it has been possible to obtained anisotropic high spin molecules that behave as single molecule magnets. The paper reviews some of the steps that lead to these findings and some of the prospects opened in the field of single molecule magnets. Corresponding author. E-mail: marvaud@ccr.jussieu.fr Received July 19, 2002; accepted July 23, 2002     

线型和非线型分子转动光谱强度的统计模型

In this study, we found regular behavior, from a statistical point of view, in the intensities of rotational spectra for several organic and inorganic molecules at room temperature. Non-linear molecules, for which a common intensity behavior was derived, were especially interesting. We provided theoretical support for the obtained results based on the Boltzmann distribution. Boltzmann power laws were used to reproduce the statistical behavior of the intensities from the spectra of linear and non-linear molecules. We only used statistical arguments and no specific details of any molecule were used. Therefore, these results are applicable to a large class of atoms and molecules and the model is valid when considering similar conditions to those used in this study.