Cucurbituril-modulated supramolecular assemblies: from cyclic oligomers to linear polymers

Employing bis(p-sulfonatocalix[4]arenes) (bisSC4A) and N',N'hexamethylenebis(1-methyl-4,4'-bipyridinium) (HBV(4+)) as monomer building blocks, the assembly morphologies can be modulated by cucurbit[n]uril (CB[n]) (n = 7, 8), achieving the interesting topological conversion from cyclic oligomers to linear polymers. The binary supramolecular assembly fabricated by HBV(4+) and bisSC4A units, forms an oligomeric structure, which was characterized by NMR spectroscopy, atomic force microscopy (AFM), transmission electron microscopy (TEM), dynamic light scattering (DLS), isothermal titration calorimetry (ITC), and gel permeation chromatography (GPC) experiments. The ternary supramolecular polymer participated by CB[8] is constructed on the basis of host-guest interactions by bisSC4A and the [2]pseudorotaxane HBV(4+)@CB[8], which is characterized by means of AFM, DLS, NMR spectroscopy, thermogravimetric analysis (TGA), UV/Vis spectroscopy, and elemental analysis. CB[n] plays vital roles in rigidifying the conformation of HBV(4+), and reinforcing the host-guest inclusion of bisSC4A with HBV(4+), which prompts the formation of a linear polymer. Moreover, the CB[8]-participated ternary assembly could disassemble into the molecular loop HBV(2+)@CB[8] and free bisSC4A after reduction of HBV(4+) to HBV(2+), whereas the CB[7]-based assembly remained unchanged after the reduction. CB[8] not only controlled the topological conversion of the supramolecular assemblies, but also improved the redox-responsive assembly/disassembly property practically.     

Formation of aqua and tetraammine Cu(II) complexes inside the cavities of cucurbit[6,8]urils: A DFT forecast

Results of DFT calculations of the structure and thermodynamics of formation of aqua and tetraammine Cu(II) complexes inside CB[n] (n = 6,8) are presented in this study. Formation thermodynamics of the complexes in the cavitands was evaluated by taking into account the most probable number of water molecules inside CB[n]. In this methodology, the complexation was first considered as a substitution reaction in which the guest complex displaces partially or completely the water molecules that are located inside the cavity. The water molecules present in the cavitand were shown to play an important role in the fixation of the guest complex inside the cavity due to the hydrogen bonds with the oxygen portals. The hydration of Cu(II) ion inside CB[6] leads to the formation of an inclusion compound with the formula {[Cu(H₂O)₄]²⁺·2H₂O}@CB[6] while in CB[8] {[Cu(H₂O)₆]²⁺·4H₂O}@CB[8] is formed. For the binding of tetraammine Cu(II) complex, CB[8] was determined to be a significantly more suitable “container” than CB[6]. Both a direct embedding of this complex into the CB[8] and another mechanism in which ammonia molecules replace the water molecules in the Cu(II) aqua complex, preexisting in CB[8] were determined to be thermodynamically possible. Both these lead to the formation of the resultant inclusion compound described by the formula {[Cu(NH₃)₄(H₂O)₂]²⁺·4H₂O}@CB[8].     

From Packed “Sandwich” to “Russian Doll”: Assembly by Charge‐Transfer Interactions in Cucurbit[10]uril

As the host possessing the largest cavity in the cucurbit[n]uril (CB[n]) family, CB[10] has previously displayed unusual recognition and assembly properties with guests but much remains to be explored. Herein, we present the recognition properties of CB[10] toward a series of bipyridinium guests including the tetracationic cyclophane known as blue box along with electron‐rich guests and detail the influence of encapsulation on the charge‐transfer interactions between guests. For the mono‐bipyridinium guest (methylviologen, MV ²⁺), CB[10] not only forms 1:1 and 1:2 inclusion complexes, but also enhances the charge‐transfer interactions between methylviologen and dihydroxynaphthalene ( HN ) by mainly forming the 1:2:1 packed “sandwich” complex (CB[10] ? 2 MV ²⁺ ?HN ). For guest 1 with two bipyridinium units, an interesting conformational switching from linear to “U” shape is observed by adding catechol to the solution of CB[10] and the guest. For the tetracationic cyclophane‐blue box, CB[10] forms a stable 1:1 inclusion complex; the two bipyridinium units tilt inside the cavity of CB[10] according to the X‐ray crystal structure. Finally, a supramolecular “Russian doll” was built up by threading a guest through the cavities of both blue box and CB[10].     

Modulating the Nucleated Self‐Assembly of Tri‐β3‐Peptides Using Cucurbit[n]urils

The modulation of the hierarchical nucleated self‐assembly of tri‐β³‐peptides has been studied. β³‐Tyrosine provided a handle to control the assembly process through host‐guest interactions with CB[7] and CB[8]. By varying the cavity size from CB[7] to CB[8] distinct phases of assembling tri‐β³‐peptides were arrested. Given the limited size of the CB[7] cavity, only one aromatic β³‐tyrosine can be simultaneously hosted and, hence, CB[7] was primarily acting as an inhibitor of self‐assembly. In strong contrast, the larger CB[8] can form a ternary complex with two aromatic amino acids and hence CB[8] was acting primarily as cross‐linker of multiple fibers and promoting the formation of larger aggregates. General insights on modulating supramolecular assembly can lead to new ways to introduce functionality in supramolecular polymers.     

Self‐Assembly of Anionic Porphyrins and Alkaline or Alkaline Earth Metal Ions Mediated by Cucurbit[7,8]uril

Nanoscaled coordination polymers based on biologically prevalent ions have potential applications in drug delivery and biomedical imaging. Herein, coordination polymer nanoparticles of anionic porphyrins, including meso‐tetra(4‐carboxyphenyl)‐porphyrin (H₂TCPP^4?) and meso‐tetra(4‐sulfonatophenyl)‐porphyrin (H₂TPPS^4?), and alkaline or alkaline earth metal cations, such as K⁺ and Ca²⁺, were constructed in aqueous solution in the presence of cucurbit[7]uril (CB7) or cucurbit[8]uril (CB8). UV/Vis absorption and fluorescence spectroscopy, dynamic light scattering (DLS), scanning electron spectroscopy (SEM), and atomic force microscopy (AFM) were applied to explore the assembly and particle formation of porphyrin anions and metal cations mediated by CBn. The particle size depends on the kinds of CBn and metal cations and their concentrations. The uptake of H₂TPPS^4? particles by tumor cells (A549 cells) was found to be more efficient than H₂TPPS^4? at 37 °C, showing the application potential of such assembled particles in biology and medicine.     

Programming A Molecular Relay for Ultrasensitive Biodetection through 129Xe NMR

A supramolecular strategy for detecting specific proteins in complex media by using hyperpolarized ¹²⁹Xe NMR is reported. A cucurbit[6]uril (CB[6])‐based molecular relay was programmed for three sequential equilibrium conditions by designing a two‐faced guest (TFG) that initially binds CB[6] and blocks the CB[6]–Xe interaction. The protein analyte recruits the TFG and frees CB[6] for Xe binding. TFGs containing CB[6]‐ and carbonic anhydrase II (CAII)‐binding domains were synthesized in one or two steps. X‐ray crystallography confirmed TFG binding to Zn²⁺ in the deep CAII active‐site cleft, which precludes simultaneous CB[6] binding. The molecular relay was reprogrammed to detect avidin by using a different TFG. Finally, Xe binding by CB[6] was detected in buffer and in E. coli cultures expressing CAII through ultrasensitive ¹²⁹Xe NMR spectroscopy.     

Cooperative Self‐Assembly of a Quaternary Complex Formed by Two Cucurbit[7]uril Hosts,Cyclobis(paraquat‐p‐phenylene), and a “Designer” Guest

The self‐assembly in aqueous solution of the well‐known cyclophane, cyclobis(paraquat‐p‐phenylene) (BB⁴⁺), and two cucurbit[7]uril (CB7) hosts around a simple hydroquinol‐based, diamine guest (GH₂²⁺) was investigated by ¹H NMR and electronic absorption spectroscopies, electrospray mass spectrometry and DFT computations. The formation of a quaternary supramolecular assembly [GH₂²⁺⋅BB⁴⁺⋅ (CB7)₂] was shown to be a very efficient process, which takes place not only because of the attractive forces between each of the hosts and the guest, but also because of the lateral interactions between the hosts in the final assembly. This complementary set of attractive interactions results in clear cooperative binding effects that help overcome the entropic barriers for multiple component assembly.     

Cooperative Self‐Assembly of a Quaternary Complex Formed by Two Cucurbit[7]uril Hosts,Cyclobis(paraquat‐p‐phenylene), and a “Designer” Guest

The self‐assembly in aqueous solution of the well‐known cyclophane, cyclobis(paraquat‐p‐phenylene) (BB⁴⁺), and two cucurbit[7]uril (CB7) hosts around a simple hydroquinol‐based, diamine guest (GH₂²⁺) was investigated by ¹H NMR and electronic absorption spectroscopies, electrospray mass spectrometry and DFT computations. The formation of a quaternary supramolecular assembly [GH₂²⁺?BB⁴⁺? (CB7)₂] was shown to be a very efficient process, which takes place not only because of the attractive forces between each of the hosts and the guest, but also because of the lateral interactions between the hosts in the final assembly. This complementary set of attractive interactions results in clear cooperative binding effects that help overcome the entropic barriers for multiple component assembly.     

Synthesis and guest exchange reactions of inclusion compounds of cucurbit[8]uril with nickel(II) and copper(II) complexes

Inclusion compounds of the macrocyclic cavitand cucurbit[8]uril (CB[8]) with the nickel(II) complex, {trans-[Ni(en)₂(H₂O)₂]@CB[8]}Cl₂ · 23.5H₂O, the copper(II) complex, {2[Cu(dien)(bipy)(H₂O)]@CB[8]}(ClO₄)₄ · 11H₂O, and the organic molecules, 2(pyCN)@CB[8]} · 16H₂O and {2(bpe)@CB[8]} · 17H₂O, where bipy is 4,4′-bipyridyl, pyCN is 4-cyanopyridine, and bpe is trans-1,2-bis(4-pyridyl)ethylene, were synthesized. The inclusion compounds with organic molecules were synthesized starting from inclusion compounds of cucurbit[8]uril with cyclam and ethylenediamine complexes of copper(II) and nickel(II) by the guest exchange method, which is based on the replacement of one guest with another in the cavity of the cavitand The resulting compounds were characterized by X-ray diffraction, ESR, ¹H NMR, IR, and electronic absorption spectroscopy, and electrospray mass spectrometry. Photochemically induced [2+2]-cycloaddition of two 1,2-bis(4-pyridyl)ethylene molecules included in cucurbit[8]uril was studied. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 25–34, January, 2006.     

Influence of self-assembly of amphiphilic imidazolium ionic liquids on their host–guest complexes with cucurbit[n]urils

Two symmetric amphiphilic imidazolium ionic liquids having ω-undecenyl chains form supramolecular complexes with CB[7] and CB[8] in water as revealed by ¹H NMR spectroscopy and MALDI-MS. Binding constants in the range 10⁴ to 10⁵ M^?1 were estimated from the conductivity measurements for the 1:1 complexes of these imidazolium ionic liquids with CB[7] and CB[8]. Radical initiated polymerization of these host–guest complexes at concentrations above the critical self-assembly concentration of imidazolium ionic liquids to form liposomes, destroys completely (CB[7]) or partially (CB[8]) the host–guest ionic liquid@CB[n] complex; this behaviour was proved by titration with acridine orange tricyclic dye, of CB[n]s in the colloidal solutions of the liposomes before and after performing dialysis to remove free CB[n]s. Thus, the increase in the fluorescence emission of acridine orange by CB[7] is not observed if the polymerized ionic liquid@CB[7] complex is submitted to dialysis to remove uncomplexed CB[7]. Analogous study by titration of absorbance change of acridine orange solutions caused by CB[8], reveals only a partial destruction of the host–guest complex by self-assembly of amphiphilic ionic liquid above the critical self-assembly concentration. The results obtained have been rationalized considering that the driving force for the formation of supramolecular ionic liquid@CB[n] complexes is a hydrophobic interaction between the apolar alkenyl chain and the cucurbituril interior cavity and that these hydrophobic interactions are disturbed when self-assembly leading to liposomes occurs.     

A Study of the Interaction Between Cucurbit[8]uril and Alkyl‐Substituted 4‐Pyrrolidinopyridinium Salts

The interaction between cucuribit[8]uril (Q[8]) and a series of 4‐pyrrolidinopyridinium salts bearing aliphatic substituents at the pyridinium nitrogen, namely 4‐(C₄H₈N)C₅H₅NRBr, where R=Et (g1), n‐butyl (g2), n‐pentyl (g3), n‐hexyl (g4), n‐octyl (g5), n‐dodecyl (g6), has been studied in aqueous solution by ¹H NMR spectroscopy, electronic absorption spectroscopy, isothermal titration calorimetry and mass spectrometry. Single crystal X‐ray diffraction revealed the structure of the host–guest complexes for g1, g2, g3, and g5. In each case, the Q[8] contains two guest molecules in a centrosymmetric dimer. The orientation of the guest molecule changes as the alkyl chain increases in length. Interestingly, in the solid state, the inclusion complexes identified are different from those observed in solution, and furthermore, in the case of g3, Q[8] exhibits two different interactions with the guest. In solution, the length of the alkyl chain plays a significant role in determining the type of host–guest interaction present.     

Cucurbit[7]uril complexations of bis(isoquinolinium)alkane dications in aqueous solution

The 1:1 and 2:1 host–guest complexation of a series of 1,n-bis(isoquinolinium)alkane dications (Iq(CH₂)_nIq²⁺, n = 2, 4, 5, 6, 8, 9, 10 and 12, and Iq(p-xylene)Iq²⁺) by cucurbit[7]uril (CB[7]) in aqueous solution has been investigated by ¹H NMR spectroscopy and ESI mass spectrometry. The site of binding of the first CB[7] is dependent on the nature of the central linker group, with encapsulation of the p-xylene group or the polymethylene chain when n = 6–10.With shorter (n = 2–5) or longer (n = 12) chains, the first CB[7] binds over an isoquinolinium group. With a second CB[7], the binding of the central group is abandoned in favour of the CB[7] hosts encapsulating the two cationic isoquinolinium termini. The 1:1 and 2:1 host–guest stability constants are related to modes of binding and the nature of the central linkers, and are compared with dicationic guests bearing different terminal groups.     

Synthesis of Doubly Ethyl‐Bridged Bis(p‐sulfonatocalix[4]arene) and Its Supramolecular Polymerization with Viologen Dimer

A water‐soluble supramolecular polymer with a high degree of polymerization and viscosity has been constructed based on the strong host–guest interaction between p‐sulfonatocalix[4]arenes (SC4As) and viologen. A homoditopic doubly ethyl‐bridged bis(p‐sulfonatocalix[4]arene) (d‐SC4A) was prepared and its binding behavior towards methyl viologen compared with the singly ethyl‐bridged bis(p‐sulfonatocalix[4]arene) (s‐SC4A) by NMR spectroscopy and isothermal titration calorimetry. By employing a viologen dimer (bisMV⁴⁺) as the homoditopic guest, two linear AA/BB‐type supramolecular polymers, d‐SC4A?bisMV⁴⁺ and s‐SC4A?bisMV⁴⁺, were successfully constructed. Compared with s‐SC4A?bisMV⁴⁺, d‐SC4A?bisMV⁴⁺ shows much higher solubility and viscosity, and has also been characterized by viscosity, diffusion‐ordered NMR spectroscopy, dynamic light scattering, and atomic force microscopy measurements. Furthermore, the polymer is responsive to electrostimulus as viologen is electroactive, which was studied by cyclic voltammetry. This study represents a proof‐of‐principle as the polymer can potentially be applied as a self‐healing and degradable polymeric material.     

Isolated supramolecular [Ru(bpy)3]-viologen-[Ru(bpy)3] complexes with trapped CB[7,8] and photoinduced electron-transfer study in nonaqueous solution

The synthesis of two supramolecular diruthenium complexes, 1 ?CB[7] and 1 ?CB[8] (CB[n]=cucurbit[n]uril), which contain the respective host CB[7] and CB[8], were synthesized and isolated. In the case of host CB[8], the desired supramolecular complex was obtained by utilizing dihydroxynapthalene as a template during the synthesis. The ¹H NMR spectra, electrochemistry, and photochemistry of these supramolecular complexes were performed in nonaqueous solution. The results show that both CB[7,8] hosts mainly bind to the linker part in solution in acetonitrile. This binding also lowers the oxidation potential of the ruthenium metal center and hinders the quenching effect by the viologen moiety. It has also been shown that external methylviologen can be included into 1 ?CB[8]. Analysis with NMR spectroscopy, electrochemistry, and photochemistry clearly shows a viologen radical dimer formation between the bound viologen and free methylviologen, thereby showing that the unique abilities of the CB[8] host can be utilized even in nonaqueous solution.     

Pseudo[n,m]rotaxanes of Cucurbit[7/8]uril and Viologen‐Naphthalene Derivative: A Precise Definition of Rotaxane

Rotaxane is a kind of classic supramolecule, which is usually constructed from a number of macrocycles and one axis molecule. Herein, we have expanded the supramolecular structure of [n]rotaxane to offer a precise definition of (pseudo)[n,m]rotaxane for accurately describing the two kinds of (pseudo)rotaxanes structures, which are self‐assembled from cucurbit[7/8]uril (CB[7/8]) and viologen‐naphthalene derivative, respectively. Furthermore, these CB‐based pseudorotaxanes exhibit varied photophysical properties, stimuli‐responsive behavior triggered by competitive guest, and self‐sorting behavior.     

Surface‐Bound Cucurbit[8]uril Catenanes on Magnetic Nanoparticles Exhibiting Molecular Recognition

We demonstrate the preparation of surface‐bound cucurbit[8]uril (CB[8]) catenanes on silica nanoparticles (NPs), where CB[8] was employed as a tethered supramolecular “handcuff” to selectively capture target guest molecules. In this catenane, CB[8] was threaded onto a methyl viologen (MV²⁺) axle and immobilized onto silica NPs. The formation of CB[8] catenanes on NPs were confirmed by UV/Vis titration experiments and lithographic characterization, demonstrating a high density of CB[8] on the silica NPs surface, 0.56 nm^?2. This CB[8] catenane system exhibits specific molecular recognition towards certain aromatic molecules such as perylene bis(diimide), naphthol and aromatic amino acids, and thus it can act as a nanoscale molecular receptor for target guests. Furthermore, we also demonstrate its use as an efficient and recyclable nano‐platform for peptide separation. By embedding magnetic NPs inside silica NPs, separation could be achieved by simply applying an external magnetic field. Moreover, the peptides captured by the catenanes could be released by reversible single‐electron reduction of MV²⁺. The entire process demonstrated high recoverability.     

Viologen‐Templated Arrays of Cucurbit[7]uril‐Modified Iron‐Oxide Nanoparticles

Magnetic and fluorescent assemblies of iron‐oxide nanoparticles (NPs) were constructed by threading a viologen‐based ditopic ligand, DPV²⁺, into the cavity of cucurbituril (CB[7]) macrocycles adsorbed on the surface of the NPs. Evidence for the formation of 1:2 inclusion complexes that involve DPV²⁺ and two CB[7] macrocycles was first obtained in solution by ¹H NMR and emission spectroscopy. DPV²⁺ was found to induce self‐assembly of nanoparticle arrays (DPV²⁺?CB[7]NPs) by bridging CB[7] molecules on different NPs. The resulting viologen‐crosslinked iron‐oxide nanoparticles exhibited increased saturation magnetization and emission properties. This facile supramolecular approach to NP self‐assembly provides a platform for the synthesis of smart and innovative materials that can achieve a high degree of functionality and complexity and that are needed for a wide range of applications.     

Cucurbit[7]uril: A High‐Affinity Host for Encapsulation of Amino Saccharides and Supramolecular Stabilization of Their α‐Anomers in Water

Cucurbit[7]uril (CB[7]), an uncharged and water‐soluble macrocyclic host, binds protonated amino saccharides (D ‐glucosamine, D ‐galactosamine, D ‐mannosamine and 6‐amino‐6‐deoxy‐D ‐glucose) with excellent affinity (K_a=10³ to 10⁴ M ^?1). The host–guest complexation was confirmed by NMR spectroscopy, isothermal titration calorimetry (ITC), and MALDI‐TOF mass spectral analyses. NMR analyses revealed that the amino saccharides, except D ‐mannosamine, are bound as α‐anomers within the CB[7] cavity. ITC analyses reveal that CB[7] has excellent affinity for binding amino saccharides in water. The maximum affinity was observed for D ‐galactosamine hydrochloride (K_a=1.6×10⁴ M ^?1). Such a strong affinity for any saccharide in water using a synthetic receptor is unprecedented, as is the supramolecular stabilization of an α‐anomer by the host.     

Supramolecular assembler based on cucurbit[8]uril: Photodimerization of a styryl dye in water

Photolysis of aqueous solutions of styryl dye 1 in the presence of cucurbit[8]uril (CB[8]) has been studied by optical spectroscopic methods for the molar ratios n = c _CB[8]/c ₁ in the range of 0 ≤ n ≤ 6. It has been found that the inclusion complexes (1)₂@CB[8] dominate in the solution at n ≤ 0.5, whereas the complexes 1@CB[8] dominate at n ≥ 1. The stability constants have been determined for the 1: 1 (log K ₁ = 6.2 (L mol^?1)) and 2: 1 (log β = 11.9 (L² mol^?2)) complexes. The fluorescence decay kinetics of dye 1 in the presence of CB[8] is two-exponential, with the average lifetime increasing substantially at n ≥ 1. It has been shown that the system can operate in the cyclic mode as an assembler (or supramolecular catalyst) in the photodimerization reaction of dye 1 to form cyclobutane derivative 2. The stability constant of the complex 2@CB[8] (log K ₃ = 5.9 (L mol^?1)) and the quantum yield of cycloaddition (? ≈ 0.07 at n ≈ 0.5) have been determined.     

2:2 Complexes from Diphenylpyridiniums and Cucurbit[8]uril: Encapsulation‐Promoted Dimerization of Electrostatically Repulsing Pyridiniums

Rigid linear compounds G1 and G2 , which contained two 4‐phenylpyridinium (PhPy⁺) units, have been prepared to investigate their binding with cucurbit[8]uril (CB[8]). X‐ray crystallographic structures revealed that in the solid state both compounds were included by CB[8], through antiparallel stacking, to form 2:2 quaternary complexes ( G1 )₂@(CB[8])₂ and ( G2 )₂@(CB[8])₂. For the former complex, CB[8] entrapped G1 by holding two heterodimers of its Py⁺ and benzyl units, which were at opposite ends of the backbone. In contrast, for the first time, the second complex disclosed parallel stacking of two cationic Py⁺ units of G2 in the cavity of CB[8] in the solid state, despite the generation of important electrostatic repulsion. Isothermal titrations in water afforded high apparent association constants of 4.36×10⁶ and 6.43×10⁶ m ^?1 for 1:1 complexes G1 @CB[8] and G2 @CB[8], respectively, and ¹H NMR spectroscopy experiments in D₂O confirmed a similar stacking pattern to that observed in the solid state. A previous study and crystal structures of the 2:1 complexes formed between three new controls, G3–5 , and CB[8] did not display such unusual stacking of the cationic Py⁺ unit; this may be attributed to the multivalency of the two CB[8] encapsulation interactions.