Cycloalkano[1″,2″:4,5;4″,3″:4′,5′]bis(pyrrolo[2,3-c]pyrimido[5,4-e]pyridazines): synthesis, structure and mechanism of their formation

Reactions of 3-alkylamino-6,8-dimethylpyrimido[4,5-c]pyridazine-5,7(6H,8H)-diones with cyclohexyl- and cycloheptylamines in the presence of AgPy₂MnO₄ produce novel cycloalkano[1″,2″:4,5;4″,3″:4′,5′]bis(pyrrolo[2,3-c]pyrimido[5,4-e]pyridazines). Detailed information concerning the scope and mechanism of these transformations is discussed.     

The Thorpe-Ziegler-type reaction of 3-cyanopyridine-2(1H)-thiones with Biginelli 6-bromomethyl-3,4-dihydropyrimidin-2(1H)-ones: cascade assembling of tetra- and pentacyclic heterocyclic scaffolds

3-Cyanopyridine-2(1H)-thiones have been shown to react with Biginelli-type ethyl 4-aryl-6-(bromomethyl)-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxylates upon heating in DMF giving rise to ethyl 4-aryl-6-{[(3-cyanopyridin-2-yl)thio]methyl}-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxylates. The latter upon treatment with an excess of NaH or t-BuOK in boiling DMF undergo a tandem Thorpe-Ziegler-type heterocyclization to give pyrido[3″,2″:4′,5′]thieno[2′,3′:5,6]pyrido[4,3-d]pyrimidine derivatives in good yields. Selected compounds were tested for antibacterial and antifungal activity.     

Dimerization of 2-pyridylisonitriles produces π-extended fused heteroarenes useful as highly selective colorimetric and optical probes for copper ion

A very simple synthesis of pyrido[2″,1″:2′,3′]imidazo[4′,5′:4,5]imidazo[1,2-a]pyridines 2 was achieved from the dimerization of 2-pyridylisonitriles. The optical responses of these π-extended fused heteroarenes to a series of metal ions were investigated by means of UV-visible absorption spectrum in acetonitrile. It was found that most of compounds 2 selectively responded to Cu²⁺, and the limit of detection was about 3.5×10⁻⁷ M when using the best probe, 3,9-dimethylpyrido[2″,1″:2′,3′]imidazo[4′,5′:4,5]imidazo[1,2-a]pyridine 2d. Meanwhile some compounds 2 specifically showed a color change from colorless to red or yellow when they are exposed to copper ion in acetonitrile, whereas other transitional, alkali and alkaline earth metal ions could not induce a color change. This work not only established a direct access to π-extended fused heteroarenes, but also supplied novel sensitive and selective colorimetric and optical probes for copper ion.     

Synthesis of pyrido and pyrazinodithienodipyrimidine-4,8(3H,9H)-dione derivatives by the aza-Wittig methodology

A one-pot synthesis of the hitherto unreported pyrido[5″,6″:4,5;3″2″:4′,5′]dithieno[3,2-d:3′,2′-d′]dipyrimidine-4,8(3H,9H)-dione 6a-o and pyrazino[5″,6″:4,5;3″2″:4′,5′]dithieno[3,2-d:3′,2′-d′]dipyrimidine-4,8(3H,9H)-dione 6p-y pentaheterocyclic systems, based on the tandem aza-Wittig heterocumulene-mediated annulation strategy is described.     

Kinetics and mechanistic studies of the interaction of thiosulfate with cis-diaqua-bis[1-alkyl-2-(arylazo)imidazole]ruthenium(II) complexes

The nucleophilic substitution reaction of S₂O₃²⁻ with [Ru(HaaiR′)₂(OH₂)₂](ClO₄)₂ (1) [HaaiR′ = 1-alkyl-2-(phenylazo)imidazole] and [Ru(ClaaiR′)₂(OH₂)₂](ClO₄)₂ (2) [ClaaiR′ = 1-alkyl-2-(chlorophenylazo)imidazole] [where R′ = Me(a), Et(b) or Bz(c)] in acetonitrile–water (50% v/v) medium to yield Na₂[Ru(HaaiR′)₂(S₂O₃)₂] (3a, 3b or 3c) and Na₂[Ru(ClaaiR′)₂(S₂O₃)₂] (4a, 4b or 4c) has been studied. The products were characterized by microanalytical data and spectroscopic techniques (UV–Vis, NMR and mass spectroscopy). The reaction proceeds in two consecutive steps (A → B → C); each step follows first order kinetics with respect to each complex and S₂O₃²⁻, and the first step second order rate constant (k′₂) is greater than the second step one (k″₂). An increase in the π-acidity of the ligand increases the rate. Thermodynamic parameters, the standard enthalpy of activation (Δ^‡H⁰) and the standard entropy of activation (Δ^‡S⁰), have been calculated for both steps using the Eyring equation from variable temperature kinetic studies. The low Δ^‡H⁰ and large negative Δ^‡S⁰ values indicate an associative mode of activation for both aqua ligand substitution processes.     

Synthesis of terpyridine-substituted calix[n]arenes

Calix[n]arenes (n = 4,5) comprising 4-(2,2′:6′,2″-terpyridyl)-phenyl substituents at the upper rim were synthesized for the first time, employing Suzuki-type coupling reactions. All calix[n]arene derivatives were prepared as cone conformers. The single crystal X-ray structure of cone-5,11,17,23-tetra{4-(2,2′:6′,2″-terpyridyl)-phenyl}-25,26,27,28-tetrabutoxycalix[4]arene 4 is analyzed in terms of structural rigidity and potential use of these ligands as novel synthons of cage-type metallosupramolecular assemblies.     

Synthesis and characterisation of six Fe(II or III), Co(II) or Zr(IV) complexes containing the ligand [CH(SiMe2R)P(Ph)2NSiMe3] (R = Me, NEt2) and of [Co{N(SiMe3)C(Ph)C(H)P(Ph)2NSiMe3}2]

The C,N-(trimethylsilyliminodiphenylphosphoranyl)silylmethylmetal complexes [Fe(L)₂] (3), [Co(L)₂] (4), [ZrCl₃(L)]·0.83CH₂Cl₂ (5), [Fe(L)₃] (6), [Fe(L′)₂] (7) and [Co(L′)₂] (8) have been prepared from the lithium compound Li[CH(SiMe₂R)P(Ph)₂NSiMe₃] [1a, (R = Me) {≡ Li(L)}; 1b, (R = NEt₂) {≡ Li(L′)}] and the appropriate metal chloride (or for 7, FeCl₃). From Li[N(SiMe₃)C(Ph)C(H)P(Ph)₂NSiMe₃] [≡ Li(L″)] (2), prepared in situ from Li(L) (1a) and PhCN, and CoCl₂ there was obtained bis(3-trimethylsilylimino- diphenylphosphoranyl-2-phenyl-N-trimethylsilyl-1-azaallyl-N,N′)cobalt(II) (9). These crystalline complexes 3-9 were characterised by their mass spectra, microanalyses, high spin magnetic moments (not 5) and for 5 multinuclear NMR solution spectra. The X-ray structure of 3 showed it to be a pseudotetrahedral bis(chelate), the iron atom at the spiro junction.     

Rearrangements in the Scholl oxidation: implications for molecular architectures

Rearrangements readily occur in Scholl oxidations and interfere with the construction of certain molecular architectures. 3,3?,4,4′,4″,4?,5′,5″-Octamethoxy-1,1′,2′,1″,2″,1?-quaterphenyl and 3,3?,4,4′,4′′,4?,5′,5′-octamethyl-1,1′,2′,1″,2″,1?-quaterphenyl, which were conceived as precursors to benzenoid strips, rearranged under Scholl conditions to the unexpected C_2v-substituted products 1,2,5,6,9,10,12,13-octamethoxydibenzo[fg,op]naphthacene and 1,2,5,6,9,10,12,13-octamethyldibenzo[fg,op]naphthacene. This corrects a widely propagated error in the literature in which the assignments of 1,2,5,6,9,10,12,13-octamethoxydibenzo[fg,op]naphthacene (C_2v) and 1,2,5,6,8,9,12,13-octamethoxydibenzo[fg,op] naphthacene (C_2h) are crossed. A mechanism involving the migration of an aryl ring on an arenium cation intermediate is proposed.     

Synthesis and photophysics of a novel photocatalyst for hydrogen production based on a tetrapyridoacridine bridging ligand

Molecular photocatalysts allow for selectively tuning their function on a molecular level based on an in-depth understanding of their chemical and photophysical properties. This contribution reports the synthesis and photophysical characterization of the novel molecular photocatalyst [(tbbpy)₂Ru(tpac)PdCl₂]²⁺RutpacPd (with tpac = tetrapyrido[3,2-a:2′,3′-c:3″,2″-h:2?,3?-j]acridine) and its mononuclear building block. Furthermore, detailed photocatalytic activity measurements of RutpacPd are presented. The introduction of the tpac-ligand into the molecular framework offers a potential route to reduce the impact of water as compared to the well-studied class of RutpphzPd (with tpphz = tetrapyrido[3,2-a:2′,3′-c:3″,2″-h:2?,3?-j]phenazine) complexes. The distinct impact of water on the electron-transfer processes in tpphz-ligands stems from the possibility of water to form hydrogen bonds to the phenazine nitrogen atoms and will potentially reduced when replacing the phenazine by the acridine unit. The effect of this structural variation on the catalytic properties and the underlying ultrafast intramolecular charge transfer behavior will be discussed in detail.     

Novel Ag(I), Pd(II), Ni(II) complexes of N,N′-bis-(2,2-diethoxyethyl)imidazole-2-ylidene: Synthesis, structures, and their catalytic activity towards Heck reaction

Tetra-ether substituted imidazolium salts, LHX (where LH = N,N′-bis(2,2-diethoxyethyl)imidazolium cation and X = Br, BF₄, PF₆, BPh₄, NO₃ and NTf₂ anions) were derived from imidazole. Attempts to produce aldehyde functionalized imidazolium salt through acid hydrolysis of LHBr resulted an unexpected tetra-hydroxy compound L_AHBr and the dialdehyde compound L_BHBr. Reaction of LHBr with Ag₂O afforded [L₂Ag][AgBr₂] (1). Mononuclear Pd-complex trans-[L₂PdCl₂] (2) and dinuclear Pd-complex [(LPdCl₂)₂] (3) were obtained by 1:1 and 1:2 reaction of in situ generated Ag-carbene with Pd(CH₃CN)₂Cl₂. cis-[LPdPPh₃Cl₂] (4) was synthesized from reaction of PPh₃ with dinuclear complex 3. Hydrolysis of 3 under acidic conditions also generates a hydroxy derivative 3A and the aldehyde derivative 3B. Direct heating of LHBr with Ni(OAc)₂ · 4H₂O at 120 °C under vacuum generated trans-[L₂NiBr₂] (5). These complexes were characterized by NMR, mass, elemental analysis, and X-ray single crystal diffraction analysis. Pd--Pd interaction was observed in 3. All the Pd complexes exhibited excellent catalytic activity in Heck reaction.     

Steric and electronic effects in stabilizing allyl-palladium complexes of “P-N-P” ligands, X2PN(Me)PX2 (X = OC6H5 or OC6H3Me2-2,6)

The chemistry of η³-allyl palladium complexes of the diphosphazane ligands, X₂PN(Me)PX₂ [X = OC₆H₅ (1) or OC₆H₃Me₂-2,6 (2)] has been investigated.The reactions of the phenoxy derivative, (PhO)₂PN(Me)P(OPh)₂ with [Pd(η³-1,3-R′,R″-C₃H₃)(μ-Cl)]₂ (R′ = R″ = H or Me; R′ = H, R″ = Me) give exclusively the palladium dimer, [Pd₂{μ-(PhO)₂PN(Me)P(OPh)₂}₂Cl₂] (3); however, the analogous reaction with [Pd(η³-1,3-R′,R″-C₃H₃)(μ-Cl)]₂ (R′ = R″ = Ph) gives the palladium dimer and the allyl palladium complex [Pd(η³-1,3-R′,R″-C₃H₃)(1)](PF₆) (R′ = R″ = Ph) (4). On the other hand, the 2,6-dimethylphenoxy substituted derivative 2 reacts with (allyl) palladium chloro dimers to give stable allyl palladium complexes, [Pd(η³-1,3-R′,R″-C₃H₃)(2)](PF₆) [R′ = R″ = H (5), Me (7) or Ph (8); R′ = H, R″ = Me (6)].Detailed NMR studies reveal that the complexes 6 and 7 exist as a mixture of isomers in solution; the relatively less favourable isomer, anti-[Pd(η³-1-Me-C₃H₄)(2)](PF₆) (6b) and syn/anti-[Pd(η³-1,3-Me₂-C₃H₃)(2)](PF₆) (7b) are present to the extent of 25% and 40%, respectively. This result can be explained on the basis of the steric congestion around the donor phosphorus atoms in 2. The structures of four complexes (4, 5, 7a and 8) have been determined by X-ray crystallography; only one isomer is observed in the solid state in each case.     

Biomimetic sensor based on MnMn complex as manganese peroxidase mimetic for determination of rutin

A novel biomimetic sensor for rutin determination based on a dinuclear complex [Mn^IIIMn^II(Ldtb)(μ-OAc)₂]BPh₄ containing an unsymmetrical dinucleating ligand, 2-[N,N-bis(2-pyridylmethyl)-aminomethyl]-6-[N-(3,5-di-tert-butyl-2-oxidoben-zyl)-N-(2-pyridylamino)aminomethyl]-4-methylphenol (H₂Ldtb), as a manganese peroxidase mimetic was developed. Several parameters were investigated to evaluate the performance of the biomimetic sensor obtained after the incorporation of the dinuclear complex in a carbon paste. The best performance was obtained in 75:15:10% (w/w/w) of the graphite powder:Nujol:Mn^IIIMn^II complex, 0.1 mol L⁻¹ phosphate buffer solution (pH 6.0) and 4.0 × 10⁻⁵ mol L⁻¹ hydrogen peroxide. The response of the sensor towards rutin concentration was linear using square wave voltammetry in the range of 9.99 × 10⁻⁷ to 6.54 × 10⁻⁵ mol L⁻¹ (r = 0.9998) with a detection limit of 1.75 × 10⁻⁷ mol L⁻¹. The recovery study performed with pharmaceuticals ranged from 96.6% to 103.2% and the relative standard deviation was 1.85% for a solution containing 1.0 × 10⁻³ mol L⁻¹ rutin (n = 6). The lifetime of this biomimetic sensor was 200 days (at least 750 determinations). The results obtained for rutin in pharmaceuticals using the biomimetic sensor and those obtained with the official method are in agreement at the 95% confidence level.     

N,N-polymethylene-bisadenine complexes with d metal ions

The reaction of N⁹,N^9′-(tri or tetramethylene)-bisadenines (Ade₂C_x; x = 3 or 4) in HCl 2 M at 50 °C with MCl₂ · 2H₂O [M = Zn(II), Cd(II)] yields outer sphere compounds like the previously described [(H-Ade)₂C₃][ZnCl₄] · H₂O (3) and [(H-Ade)₂C₃]₂[Cd₂Cl₈(H₂O)₂] · 4H₂O (4) for Ade₂C₃ and the new {[(H-Ade)₂C₄][Cd₂Cl₆(H₂O)₂] · 2H₂O}_n (5) for Ade₂C₄. On the other hand, only in case of Zn(II) complexes by changing [HCl] to 0.1 M, the inner sphere compounds [H-(Ade)₂C₃(ZnCl₃)] (6) and [H-(Ade)₂C₄(ZnCl₃)] · 1.5H₂O (7) are obtained. X-ray diffraction study of compound 6, which represents the first inner sphere complex with a N⁹,N^9′-bisadenine, shows a zwitterionic form with one adenine ring protonated at N(1) while the other ring is coordinated via N(7) to a ZnCl₃ moiety as in other alkyl-adenine derivatives. In addition, with Ade₂C₄, is also possible to obtain another inner sphere complex: [(H-Ade)₂C₄(ZnCl₃)₂] · 3H₂O (8).     

Synthesis of novel pyrene discotics for potential electronic applications

Novel pyrene discotics, 6,7,15,16-tetrakis(alkylthio)quinoxalino[2′,3′:9,10]phenanthro[4,5-abc]phenazines, TQPP-[SR]₄, were synthesized efficiently. The HOMO and LUMO energy levels of TQPP-[SR]₄ were estimated to be 5.57 eV and 2.97 eV, respectively. The average saturation hole mobility of TQPP-[C₁₂H₂₅]₄ was ∼10⁻³ cm² V⁻¹ s⁻¹.     

Simultaneous measurement of trace monoadenosine and diadenosine monophosphate in biomimicking prebiotic synthesis using high-performance liquid chromatography with ultraviolet detection and electrospray ionization mass spectrometry characterization

The method for simultaneous separation and determination of trace monoadenosine and diadenosine monophosphate (i.e. 2′-AMP, 3′-AMP, 5′-AMP and 3′-5′ ApA) in biomimicking prebiotic synthesis was developed using high-performance liquid chromatography (HPLC) with ultraviolet (UV) detection and electrospray ionization mass spectrometry (ESI-MS) identification. The separation was performed on a Supelco C₁₈ column with a gradient elution (solvent A: 10 mM NH₄Ac aqueous solution; solvent B: MeOH). The flow rate was set at 1.0 ml/min. The quantitative determination was achieved by HPLC with UV detection at 260 nm. The linearity ranged from 0.5 to 100 μg/ml for each nucleotide. The limits of detection (LODs) for the four nucleotides were less than 0.30 μg/ml. The recovery ranged from 95.2 to 100.7%. The intra-day relative standard deviations (RSDs) of the retention times were between 0.7 and 1.1%. Both full-scan ESI-MS and -MS² for the four nucleotides under both positive and negative polarity were carried out and the possible cleavage pathways of them were depicted. The specific ions, [AMP + H]⁺ at m/z 348 and [ApA + H]⁺ at m/z 597, were chosen to characterize the four nucleotides in biomimicking prebiotic synthesis between N-(O,O-diisopropyl) phosphoryl amino acid (Dipp-aa) and adenosine. Using the proposed HPLC/UV/ESI-MS method, the concentration of 2′-AMP, 3′-AMP, 5′-AMP and 3′-5′ ApA in the biomimicking prebiotic synthesis samples were determined.     

Synthesis of B-trisubstituted borazines via the rhodium-catalyzed hydroboration of alkenes with N,N′,N″-trimethyl or N,N′,N″-triethylborazine

Hydroboration of terminal and internal alkenes with N,N′,N″-trimethyl- and N,N′,N″-triethylborazine was carried out at 50 °C in the presence of a rhodium(I) catalyst. Addition of dppb or DPEphos (1 equiv.) to RhH(CO)(PPh₃)₃ gave the best catalyst for hydroboration of ethylene at 50 °C, resulting in a quantitative yield of B,B′,B″-triethyl-N,N′,N″-trimethylborazine. On the other hand, a complex prepared from (t-Bu)₃P (4 equiv.) and [Rh(coe)₂Cl]₂ gave the best yield for hydroboration of terminal or internal alkenes.     

Synthesis and structural characterization of silver(I) complexes with moon-shaped benzo[1,2-b;4,3-b′]dithiophene phosphine derivative ligands

New silver complexes of general formula [Ag(O₃SCF₃)(PPh₂{bzt})_n] (n = 1–3, bzt = benzo[1,2-b;4,3-b′]dithiophene) have been synthesized and characterized. Spectroscopic studies shown neutral ligand fluxionallity, typical of silver(I) complexes. The solid state structure of the complexes was determined by X-ray crystallographic studies, showing a decrease in structure complexity with increasing number of neutral ligands in silver coordination sphere: [Ag(O₃SCF₃)(PPh₂{bzt})] is a dimer with two bridging triflate anions, further linked into polymeric bidimensional chains along bc plane, through Ag?Ph close contacts; Ag(O₃SCF₃)(PPh₂{bzt})₂] is also a dimmer with two bridging triflate anions, displaying an interesting packing feature, with zig-zag alignment of bzt groups along direction b; [Ag(O₃SCF₃)(PPh₂{bzt})₃] is a monomer.     

Synthesis and X-ray structures of new chiral Ag(I) complexes with biaryl-based N4-donor ligands

Condensation of (R)-2,2′-diamino-1,1′-binaphthyl or (R)-6,6′-dimethylbiphenyl-2,2′-diamine with 2 equiv of 2-pyridine carboxaldehyde in toluene in the presence of molecular sieves at 70 °C gives (R)-N,N′-bis(pyridin-2-ylmethylene)-1,1′-binaphthyl-2,2′-diimine (1), and (R)-N,N′-bis(pyridin-2-ylmethylene)-6,6′-dimethylbiphenyl-2,2′-diimine (3), respectively, in good yields. Reduction of 1 with an excess of NaBH₄ in a solvent mixture of MeOH and toluene (1:1) at 50 °C gives (R)-N,N′-bis(pyridin-2-ylmethyl)-1,1′-binaphthyl-2,2′-diamine (2) in 95% yield. Rigidity plays an important role in the formation of helicate silver(I) complexes. Treatment of 1, or 3 with 1 equiv of AgNO₃ in mixed solvents of MeOH and CH₂Cl₂ (1:4) gives the chiral, dinuclear double helicate Ag(I) complexes [Ag₂(1)₂][NO₃]₂ (4) and [Ag₂(3)₂][NO₃]₂ · 2H₂O (6), respectively, in good yields. While under the similar reaction conditions, reaction of 2 with 1 equiv of AgNO₃ affords the chiral, mononuclear single helicate Ag(I) complex [Ag(2)][NO₃] (5) in 90% yield. [Ag₂(1)₂][NO₃]₂ (4) can further react with excess AgNO₃ to give [Ag₂(1)₂]₃[NO₃]₂[Ag(CH₃OH)(NO₃)₃]₂ · 2CH₃OH (7) in 75% yield. All compounds have been fully characterized by various spectroscopic techniques and elemental analyses. Compounds 1 and 5-7 have been further subjected to single-crystal X-ray diffraction analyses.     

Enantioselective addition of diethylzinc to aromatic aldehydes catalyzed by Ti(IV) complexes of C2-symmetrical chiral BINOL derivatives

Enantioselective addition of diethylzinc to a series of aromatic aldehydes is developed using new chiral C₂-symmetric ligand (S)-2,2′-(1,1′-binaphthyl-2,2′-diylbis(oxy))bis(methylene)bis(4-nitrophenol) (S)-2b. The catalytic system employing 10 mol % of (S)-2b and 120 mol % of Ti(OiPr)₄ was found to promote the addition of diethylzinc to a wide range of aromatic aldehydes with electron-donating and electron-withdrawing substituents, giving up to 89% ee and up to 95% yield of the corresponding secondary alcohol under mild conditions.     

Synthesis and optical properties of conjugated N,N-dimethyl and thienyl end-capped 2,5-(arylethynyl)thiophene oligomer structures

End-capped (N,N-dimethylaminophenyl) and 2′-thienylethynyl 2,5-thiophene oligomer structures were synthesized by heterocoupling between the terminal acetylenes such as: p-(N,N-dimethylaminophenyl)ethyne (3) [or 1-(p-(N,N-dimethylaminophenyl)-2-p-(ethynylphenyl)ethyne, 4]; p-(β-ethenyl-2′-thienyl)phenylethyne (E-9) [or p-(β-ethynyl-2′-thienyl)phenylethyne, 11], and 2,5-diiodothiophene, catalyzed by the Cl₂Pd(PPh₃)₂/CuI system, in good to excellent yields. The 2,5-di[(3′,5′-di(trimethylsilylethynyl)phenyl]_x-1-ethynyl]thiophene oligomers were prepared by heterocoupling between 3′,5′-di[(trimethylsilylethynyl)phenyl]_x-1-ethyne (n = 0-2) terminal acetylenes and 2,5-diiodothiophene, in excellent yields. The terminal acetylenes were efficiently prepared by a specific protection-deprotection methodology. All the ethynylphenyl compounds obtained show fluorescence radiation emission, with a bathochromic shift of the wavelength that increases with the chain conjugation.