Insights into the Allosteric Effect of SENP1 Q597A Mutation on the Hydrolytic Reaction of SUMO1 via an Integrated Computational Study

Small ubiquitin-related modifier (SUMO)-specific protease 1 (SENP1) is a cysteine protease that catalyzes the cleavage of the C-terminus of SUMO1 for the processing of SUMO precursors and deSUMOylation of target proteins. SENP1 is considered to be a promising target for the treatment of hepatocellular carcinoma (HCC) and prostate cancer. SENP1 Gln597 is located at the unstructured loop connecting the helices α4 to α5. The Q597A mutation of SENP1 allosterically disrupts the hydrolytic reaction of SUMO1 through an unknown mechanism. Here, extensive multiple replicates of microsecond molecular dynamics (MD) simulations, coupled with principal component analysis, dynamic cross-correlation analysis, community network analysis, and binding free energy calculations, were performed to elucidate the detailed mechanism. Our MD simulations showed that the Q597A mutation induced marked dynamic conformational changes in SENP1, especially in the unstructured loop connecting the helices α4 to α5 which the mutation site occupies. Moreover, the Q597A mutation caused conformational changes to catalytic Cys603 and His533 at the active site, which might impair the catalytic activity of SENP1 in processing SUMO1. Moreover, binding free energy calculations revealed that the Q597A mutation had a minor effect on the binding affinity of SUMO1 to SENP1. Together, these results may broaden our understanding of the allosteric modulation of the SENP1−SUMO1 complex.     

Acoustical properties of single crystals of mercurous halides

Velocities of propagation of elastic waves along principal crystallographic directions in Hg₂Br₂ and Hg₂J₂ single crystals were measured using the pulse and phase-pulse techniques. The values obtained were used to calculate the components of the elastic tensors c_ik and s_ik, as well as the phase and group velocities of propagation of longitudinal and transverse waves in the (100) and (001) planes, and the angular deviation of acoustic energy flux from the direction of the corresponding wave normal. Knowledge of the anisotropy of the elastic properties of Hg₂X₂ crystals and of their change with the anion (X = Cl, Br, J) leads to deeper understanding of the character of bonds in the crystal lattice and points the way to a better utilization of technical properties of the crystals. — Minimum velocity of propagation of an elastic wave falls in the case of Hg₂J₂ to a value v [100] [11 10] = 0,25 · 10⁵ cm/s, what is the lowest value known among all crystals. Maximum angular deviation of acoustic energy flux — nearly 50° — is exhibited by the quasi-longitudinal wave in Hg₂J₂ crystals. On substituting the Cl⁻ ions with Br⁻ and J⁻ ions, the anisotropy of elastic moduli C₃₃/C₁₁ increases by nearly 80%. Different mechanisms contribute to vectorial dependence of the elastic properties along different crystallographic directions.     

Enzymatic Synthesis of a Diastereomer of Neoabyssomicin Derivative Using the Diels-Alderase AbyU

Main observation and conclusion The enzyme AbyU catalyses a Diels-Alder (DA) reaction during abyssomicin C biosynthesis.In this study,AbyU is shown to convert t...     

不协调目标信息系统知识约简的比较研究

研究不协调目标信息系统的各种知识约简之间的关系。证明分布约简既是β上分布约简，也是β下分布约简，并且在一定条件下,β上、下分布约简与不协调目标信息系统的分配约简和最大分布约简等价。     

Development of a Millimeter Wave Compact Equipment for NDT of Materials

We developed a compact equipment working at 94 GHz to replace the commonly used network analyzer for nondestructive testing of materials. The compact equipment was designed to measure the variations in the amplitude and phase of the reflected signal from the material relative to a reference signal. A good accuracy of the amplitude and phase measurement of the equipment was obtained in the confirmative experiments. The distribution of a drop of water in a wood plate is clearly visible in the millimeter wave images obtained by the amplitude and phase measurement.     

The effect of hydrogen addition on flammability limit and NOx emission in ultra-lean counterflow CH4/air premixed flames

The effect of hydrogen addition to ultra lean counterflow CH₄/air premixed flames on the extinction limits and the characteristics of NO_x emission was investigated by numerical simulation. Detailed chemistry and complex thermal and transport properties were employed. The results show that the addition of hydrogen can significantly enlarge the flammable region and extend the flammability limit to lower equivalence ratios. If the equivalence ratio is kept constant, the addition of hydrogen increases the emission of NO in a flame due to the enhancement in the rate of the NNH or N₂O intermediate NO formation routes. The addition of hydrogen causes a monotonic decrease in the formation of NO₂ and N₂O, except flames near the extinction limits, where the emission of NO₂ and N₂O first increases, and then decreases with the increase in the fraction of hydrogen. Overall, hydrogen enrichment technology allows stable combustion under ultra lean conditions, resulting in significant CO₂ and NO emission reduction.     

Theoretical and experimental studies on mesoscale flame propagation and extinction

Mesoscale flame propagation and extinction of premixed flames in channels are investigated theoretically and experimentally. Emphasis is placed on the effect of wall heat loss and the wall–flame interaction via heat recirculation. At first, an analytical solution of flame speed in mesoscale channels is obtained. The results showed that channel width, flow velocity, and wall thermal properties have dramatic effects on the flame propagation and lead to multiple flame regimes and extinction limits. With the decrease in channel width, there exist two distinct flame regimes, a fast burning regime and a slow burning regime. The existence of the new flame regime and its extended flammability limit render the classical quenching diameter inapplicable. Furthermore, the results showed that at optimum conditions of flow velocity and wall thermal properties, mesoscale flames can propagate faster than the adiabatic flame. Second, numerical simulation with detailed chemistry demonstrated the existence of multiple flame regimes. The results also showed that there is a non-linear dependence of the flame speed on equivalence ratio. Moreover, it is shown that the Nusselt number has a significant impact on this non-linear dependence. Finally, the non-linear dependence of flame speed on equivalence ratio for both flame regimes is measured using a C₃H₈–air mixture. The results are in good agreement with the theory and numerical simulation.