Comparison of 17beta-estradiol structures from x-ray diffraction and solution NMR

The NMR-derived structure of estrogen (17beta-estradiol, E2), the drug of choice for postmenopausal women, was compared with a recent literature crystal x-ray structure of Fab-bound E2. 1H and 13C NMR spectra of E2 were acquired in DMSO-d6. Assignments were obtained from an analysis of DQF-COSY, TOCSY, HETCOR, HMQC and HMBC 2D NMR spectra. The 1H and 13C NMR assignments are the first reported for E2 in DMSO-d6. Two solution structures, S1 and S2, were obtained with molecular modeling using NOE constraints. S1 overlaps with the crystal structure for all rings. S2 shows prominent differences in the C-ring (C9--C11--C12--C13) segment, which deviates from a chair conformation, and excellent overlap in the A-, B- and D-rings of E2. The C-ring in S2 adopts a boat conformation as opposed to a chair conformation in the x-ray and S1 structures. The S2 structure is about 6 degrees more twisted than the bound x-ray and S1 models. The S1, S2 and x-ray structures had ring bowing values of 10.1 +/- 0.3, 11 +/- 1 and 10.37 degrees , respectively. Of the 100 solution conformers generated, 83 had S1 conformation and 17 had S2 conformation, with average internal energies of 112 +/- 2 and 141 +/- 2 kcal mol(-1), respectively. The 100 S1- and S2- derived conformers showed a r.m.s.d. of 0.72 A for all atoms. The x-ray, S1 and S2 C18--O17 distances were 2.93, 2.92 +/- 0.01 and 2.93 +/- 0.01 A, respectively, and the O3--O17 distances were 11.06, 11.18 +/- 0.12, and 10.89 +/- 0.05 A, respectively.     

Comparison of the phytoestrogen trans-resveratrol (3,4',5-trihydroxystilbene) structures from x-ray diffraction and solution NMR

The NMR-derived solution structure of trans-3,4',5-trihydroxystilbene (resveratrol) was compared with two recent literature crystal x-ray structures, resveratrol in complex with human transthyretin (TTR-RES) from 1DVS.pdb and resveratrol bound to chalcone synthase (CHS-RES) from 1CGZ.pdb. 1H and 13C NMR spectra of resveratrol were acquired in DMSO-d6. Assignments were obtained from an analysis of DQF-COSY, TOCSY, DEPT, HMQC/HSQC, HMBC and INADEQUATE NMR spectra. Past 1H and 13C NMR literature assignments are corrected. The dihedral angle 2-1-1'-2' provides an indication of the relative spatial orientation of the two phenolic rings. Values of 1.62, - 54.10 and 12.6 +/- 1.1 degrees were found for the 1DVS.pdb, 1CGZ.pdb and NMR resveratrol structures, respectively. The 1DVS.pdb resveratrol structure is 'flat' with the two phenolic rings along the same plane. The 1CGZ.pdb structure has these two rings almost orthogonal to each other, and the NMR structure has these two rings much closer to being along the same plane. The angles 1-alpha--alpha' and 1'-alpha'--alpha are along the same trace and of similar magnitude for the 1CGZ.pdb and NMR resveratrol structures. For the 1DVS.pdb resveratrol structure, these angles are about 7-10 degrees greater, with alpha and alpha' being 180 degrees out-of-phase from the other two structures. The alpha rings did not overlap, with the NMR result representing a 'median model' of the two x-ray structures.     

A Struwe Type Decomposition Result for a Singular Elliptic Equation on Compact Riemannian Manifolds

On a compact Riemannian manifold,we prove a decomposition theorem for arbitrarily bounded energy sequence of solutions of a singular elliptic equation.     

Calorimetry in nonstandard conditions: The noncrystalline phases of linear polyethylene

A linear Union Carbide PE (UC) has been analyzed by nonstandard calorimetry with a common DSC calorimeter and a Setaram C80 calorimeter. Nonstandard calorimetry entails using a low rate of heating (0.5–1 K/min), a small mass (0.5–1.5 mg), and an open cell (O‐cell) instead of the standard C‐cell. Events in O‐cells overlap less and occur with a faster kinetics than in C‐cells. PE crystals are nascent, solution‐grown (S‐grown), press‐grown (P‐grown), and strained by extrusion. In Part A, the traces show that the phase‐changes in the melt, previously observed in a C80 calorimeter (slow T‐ramp) and characterized by ΔH_network, can be observed with a common DSC in nonstandard conditions. In Part B, the difference between the C‐ and O‐cells and the changes in the main peak enthalpy (ΔH_ortho) are of interest. The main result is that, in O‐cells, the value of ΔH_ortho around T_ortho, exceeds unambiguously in certain conditions ΔH_ortho found for perfect orthorhombic crystals. The main endotherm contains then another contribution, namely ΔH_network. Crystal reorganization during the slow T‐ramp is followed in the C‐ and O‐cells on S‐grown crystals. In O‐cells, lamellar thickening observed in the slow‐ramp is more extensive. The ease of phase‐change depends on the sample history. It is as follows: strained‐part extruded > nascent > S‐grown > P‐grown. Co‐operative chain motions are more hindered in the standard C‐cells than in the O‐cells. In Part C, lower values of m succeed in bringing phase‐changes in P‐grown (O‐cells) samples. The origin of the events is discussed: three processes are thought to contribute to the phase‐changes namely, melting of strained short‐range order, activation of vibrations in the CH₂ groups, and fast decay of chain orientation which occurs simultaneously with melting. © 2007 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 45: 1932–1949, 2007     

Aquaporin 1 Facilitated Hepatocellular Carcinoma SMMC7221 Cell Migration Associated with Water Permeability

The authors investigated the regulation of human aquaporin 1(hAQP1) and the involvement of aquaporin 1(AQP1) in the migration of human hepatocellular carcinoma SMMC-7221 cells using RNA intereference technology. Firstly, two short hairpin RNA(shRNA) constructs in PBSU6 vector were reconstructed and their knockdown effects were identified in SMMC-7221 cells. Next, the involvement of endogenous hAQP1 in regulating the migration of SMMC-7221 cells was investigated via siRNA technology. HAQP1-shRNA can specific...     

UV photolysis of C4N2 in water ices: new possible route of synthesis of ammonium bicarbonate and ammonium formate

Laboratory experiments involving ultraviolet (UV) irradiation of dicyanoacetylene (C(4)N(2)) trapped in water ice at 10 K have been conducted and monitored by infrared spectroscopy (FTIR). By the support of isotopic experiments and theoretical calculations, the irradiation of a DCA/H(2)O ice mixture at lambda > 230 nm has been found to be a possible source of NH(4)(+)HCO(3)(-) (ammonium bicarbonate) and NH(4)(+)HCOO(-) (ammonium formate). These latter compounds can arise from a proton-transfer reaction between H(2)O and the CN radical, which is issued from photolyzed C(4)N(2).     

Polymerization-induced Phase Separation: Phase Behavior Developments and Hydrodynamic Interaction

The process of polymer synthesis based on polymerization-induced phase separation (PIPS) is revisited from the theoretical point of view. Cahn–Hilliard–Cook theories for spinodal decomposition are adapted to describe the kinetics of phase separation and deduce the time-resolved scattering function, while the double reaction model is used to describe the kinetics of polymerization. Coupling of these two kinetics is provided by the Carother's equation relating the fraction of reacted monomers to the degree of polymerization at time t, denoted N(t). It is argued that the approach to criticality is governed by a critical parameter, χ_c, that is different from the usual parameter for spinodal decomposition, χ_s, deduced from the second derivative of the free energy. While the latter parameter depends on the reciprocal degree of polymerization N^?1(t), the former one depends on its time integral. This leads to significant consequences on the phase behavior developments during the PIPS process. Hydrodynamic interactions are found to speed up the emergence of instability modes. Although the qualitative trends remain similar to those of the Rouse dynamics, important quantitative changes are found due to the long-range viscous flow effects.     

Spectroscopic analysis of a laser-induced NaCl–water plasma. The influence of self-absorption

A spectroscopic study of the plasma plume created by a laser beam on the surface of NaCl aqueous solution is presented. Optical emission spectra are recorded and temporally analyzed; electron number density is determined from the Stark broadening of the NI nitrogen line, and temperature is obtained from relative intensity of OI oxygen lines. The intensity of an atomic line from sodium was used to quantitate its molar percentage in the Oceanic and Mediterranean sea, and calibration curves have been constructed for concentrations ranging up to 1.5%.     

Synthesis of symmetric and dissymetric bisperfluoroalkanesulfonylimides and evaluation of their inhibition on bovine carbonic anhydrase

This study describes a synthesis of symmetric and dissymmetric bis[(perfluoroalkane)‐sulfonyl]imides by the reaction of the sodium salt of perfluoroalkanesulfonamide R_FSO₂NH⁻Na⁺ (R_F = C₄F₉, C₆F₁₃, C₈F₁₇) with hexamethyldisilazane and perfluoroalkanesulfonylfluoride R_FSO₂F (R_F = C₄F₉, C₆F₁₃, C₈F₁₇). They are obtained, in two steps, in moderate overall yield. Moreover, this paper provides a study of their inhibition on bovine carbonic anhydrase. © 2008 Wiley Periodicals, Inc. Heteroatom Chem 19:542–548, 2008; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20452     

Understanding the origin of the enantioselectivity and the mechanism of the asymmetric reduction of ketimine generated from acetophenone with oxazaborolidine catalyst

Structural Chemistry - The enantioselectivity of the oxazaborolidine-catalysed asymmetric reduction reaction of ketimine generated from acetophenone has been investigated by transition state theory...