Free shear turbulence intensity anisotropies and the energy cascade

An extended energy cascade theory is presented, which correctly predicts the Reynolds number dependence of centerline turbulence intensities in the self-preserving region of fully turbulent free shear flows, shown clearly by the experimental measurements. The model indicates that below Re = 10⁶ too few stages exist to completely erase the cascade's “memory” of initial conditions.     

Heat of freezing for supercooled water: measurements at atmospheric pressure

Unlike reversible phase transitions, the amount of heat released upon freezing of a metastable supercooled liquid depends on the degree of supercooling. Although terrestrial supercooled water is ubiquitous and has implications for cloud dynamics and nucleation, measurements of its heat of freezing are scarce. We have performed calorimetric measurements of the heat released by freezing water at atmospheric pressure as a function of supercooling. Our measurements show that the heat of freezing can be considerably below one predicted from a reversible hydrostatic process. Our measurements also indicate that the state of the resulting ice is not fully specified by the final pressure and temperature; the ice is likely to be strained on a variety of scales, implying a higher vapor pressure. This would reduce the vapor gradient between supercooled water and ice in mixed phase atmospheric clouds.     

Radiological dose assessment of naturally occurring radioactive materials in concrete building materials

Previous studies have shown that the natural radioactivity contained in building materials have significantly influenced the dose rates in dwelling. Exposure to natural radiation in building has been of concerned since almost 80 % of our daily live are spend indoor. Thus, the aim of the study is to assess the radiological risk associated by natural radioactivity in soil based building materials to dwellers. A total of 13 Portland cement, 46 sand and 43 gravel samples obtained from manufacturers or bought directly from local hardware stores in Peninsular of Malaysia were analysed for their radioactivity concentrations. The activity concentrations of ²²⁶Ra, ²³²Th and ⁴⁰K in the studied building materials samples were found to be in the range of 3.7–359.3, 2.0–370.8 and 10.3–1,949.5 Bq kg^?1 respectively. The annual radiation dose rates (μSv year^?1) received by dwellers were evaluated for 1 to 50 years of exposure using Resrad-Build Computer Code based on the activity concentration of ²²⁶Ra, ²³²Th and ⁴⁰K found in the studied building material samples. The rooms modelling were based on the changing parameters of concrete wall thickness and the room dimensions. The annual radiation dose rates to dwellers were found to increase annually over a period of 50 years. The concrete thicknesses were found to have significantly influenced the dose rates in building. The self-absorption occurred when the concrete thickness was thicker than 0.4 m. Results of this study shows that the dose rates received by the dwellers of the building are proportional to the size of the room. In general the study concludes that concrete building materials; Portland cements, sands, and gravels in Peninsular of Malaysia does not pose radiological hazard to the building dwellers.     

Zeaxanthin Production by Novel Marine Isolates from Coastal sand of India and its Antioxidant Properties

Zeaxanthin carotenoids are class of commercially important natural products and diverse biomolecules produced by plants and many microorganisms. Bacteria often produce a cocktail of polar and nonpolar carotenoids limiting their industrial applications. Marine members of the family Flavobacteriaceae are known to produce potential carotenoids such as astaxanthin and zeaxanthin. A few bacterial species have been reported for the predominant production zeaxanthin. Here, we report the molecular identification of the zeaxanthin as a major carotenoid produced by two novel bacteria (YUAB-SO-11 and YUAB-SO-45) isolated from sandy beaches of South West Coast of India and the effect of carbon sources on the production of zeaxanthin. The strains were identified based on the 16S rRNA gene sequencing as a member of genus Muricauda. The closest relatives of YUAB-SO-11 and YUAB-SO-45 were Muricauda aquimarina (JCM 11811^T) (98.9 %) and Muricauda olearia (JCM 15563^T) (99.2 %), respectively, indicating that both of these strains might represent a novel species. The highest level of zeaxanthin production was achieved (YUAB-SO-11, 1.20?±?0.11 mg g^?1) and (YUAB-SO-45, 1.02?±?0.13 mg g^?1) when cultivated in marine broth supplemented with 2 % NaCl (pH 7) and incubated at 30 °C. Addition of 0.1 M glutamic acid, an intermediate of citric acid cycle, enhanced the zeaxanthin production as 18 and 14 % by the strains YUAB-SO-11 and YUAB-SO-45 respectively. The zeaxanthin showed in vitro nitric oxide scavenging, inhibition of lipid peroxidation, and 2,2-diphenyl-1-picryl hydrazyl scavenging activities higher than the commercial zeaxanthin. The results of this study suggest that two novel strains YUAB-SO-11 and YUAB-SO-45 belonging to genus Muricauda produce zeaxanthin as a predominant carotenoid, and higher production of zeaxanthin was achieved on glutamic acid supplementation. The pigment showed good in vitro antioxidant activity, which can be exploited further for commercial applications.     

Flux line lattice symmetries in the borocarbide superconductor LuNi2B2C

We compare the results of small angle neutron scattering on the flux line lattice (FLL) obtained in the borocarbide superconductor LuNi₂B₂C with the applied field along the c- and a-axes. For H‖c the temperature dependence of the FLL structural phase transition from square to hexagonal symmetry was investigated. Above 10 K the transition onset field. H ₂(T), rises sharply, bending away from H _c2(T) in contradiction to theoretical predictions of the two merging. For H‖a a first order FLL reorientation transition is observed at H _tr=3–3.5 kOe. Below H _tr the FLL nearest neighbor direction is parallel to the b-axis, and above H _tr to the c-axis. This transition cannot be explained using nonlocal corrections to the London model.     

Dynamics of Ligand Binding to a Rigid Glycosidase**

The single-domain GH11 glycosidase from Bacillus circulans (BCX) is involved in the degradation of hemicellulose, which is one of the most abundant renewable biomaterials in nature. We demonstrate that BCX in solution undergoes minimal structural changes during turnover. NMR spectroscopy results show that the rigid protein matrix provides a frame for fast substrate binding in multiple conformations, accompanied by slow conversion, which is attributed to an enzyme-induced substrate distortion. A model is proposed in which the rigid enzyme takes advantage of substrate flexibility to induce a conformation that facilitates the acyl formation step of the hydrolysis reaction.     

Direct use of unassigned resonances in NMR structure calculations with proxy residues

We present a method that significantly enhances the robustness of (automated) NMR structure determination by allowing the NOE data corresponding to unassigned NMR resonances to be used directly in the calculations. The unassigned resonances are represented by additional atoms or groups of atoms that have no interaction with the regular protein atoms except through distance restraints. These so-called "proxy" residues can be used to generate NOE-based distance restraints in a similar fashion as for the assigned part of the protein. If sufficient NOE information is available, the restraints are expected to place the proxies at positions close to the correct atoms for the unassigned resonance, which can facilitate subsequent assignment. Convergence can be further improved by supplying additional information about the possible identities of the unassigned resonances. We have implemented this approach in the widely used automated assignment and structure calculation protocols ARIA and CANDID. We find that it significantly increases the robustness of structure calculations with regard to missing assignments and yields structures of higher quality. Our approach is still able to find correctly folded structures with up to 30% randomly missing resonance assignments, and even when only backbone and beta resonances are present! This should be of significant value to NMR-based structural proteomics initiatives.     

Depth-of-focus reduction for digital in-line holography of particle fields

Poor axial precision caused, in part, by large depth of focus (tau) has been a vexing problem in extraction of particle position from digital in-line holograms. A simple method is proposed to combat this depth-of-focus difficulty. The method is based on decoupling of size and position information. With d, Delta, and lambda being particle diameter, CCD pixel size, and the wavelength, respectively, our main theoretical result is the reduction of tau from tau - d2/lambda to tau - Delta2/lambda for particles of known size. This result is confirmed in laboratory experiments with holograms of calibrated glass spheres.     

Phase signature for particle detection with digital in-line holography

The spatial phase resulting from the digital reconstruction of an in-line hologram of a particle field is shown to yield a unique pattern that can be used for particle detection. This phase signature is present only when viewed along with the reference light. The existence of the phase pattern is verified computationally and confirmed in laboratory experiments with holograms of calibrated glass spheres. The phase signature provides an alternative to the widely used intensity method for particle detection.