Dynamics of the periodic type-K competitive Kolmogorov systems

For time-periodic dissipative and irreducible type-K competitive Kolmogorov systems, it is proved that there is a canonically defined countable family F of unordered, disjoint invariant sets with the property that, for every persistent trajectory whose ω-limit set is not a cycle, there exists a unique trajectory in some element of F such that these two trajectories are asymptotic and the corresponding points in these two trajectories are K-related.     

A note on global stability of three-dimensional Ricker models

In the recent paper [E. C. Balreira, S. Elaydi, and R. Luís, J. Differ. Equ. Appl. 23 (2017), pp. 2037–2071], Balreira, Elaydi and Luís established a good criterion for competitive mappings to have a globally asymptotically stable interior fixed point by a geometric approach. This criterion can be applied to three dimensional Kolmogorov competitive mappings on a monotone region with a carrying simplex whose planar fixed points are saddles but globally asymptotically stable on their positive coordinate planes. For three dimensional Ricker models, they found mild conditions on parameters such that the criterion can be applied to. Observing that Balreira, Elaydi and Luís' discussion is still valid for the monotone region with piecewise smooth boundary, we prove in this note that the interior fixed point of three dimensional Kolmogorov competitive mappings is globally asymptotically stable if they admit a carrying simplex and three planar fixed points which are saddles but globally asymptotically stable on their positive coordinate planes. This result is much easier to apply in the application.     

Link between population dynamics and dynamics of Darwinian evolution

We provide the link between population dynamics and the dynamics of Darwinian evolution via studying the joint population dynamics of similar populations. Similarity implies that the relative dynamics of the populations is slow compared to, and decoupled from, their aggregated dynamics. The relative dynamics is simple, and captured by a Taylor expansion in the difference between the populations. The emerging evolution is directional, except at the singular points of the evolutionary state space. Here "evolutionary branching" may occur. The diversification of life forms thus is demonstrated to be a natural consequence of the Darwinian process.     

The qualitative behavior of a second-order system with zero diagonal coefficient

This paper investigates the qualitative behavior of solutions of the autonomous planar system with zero diagonal coefficient , . Under suitable assumptions, the necessary and sufficient conditions for all solutions to be oscillatory, and for the origin to be a global center are established. The theorems on the existence and uniqueness of nontrivial periodic solutions are also proved.     

Bifurcation analysis of a metapopulation model with sources and sinks

Summary A class of functions describing the Allee effect and local catastrophes in population dynamics is introduced and the behaviour of the resulting one-dimensional discrete dynamical system is investigated in detail. The main topic of the paper is a treatment of the two-dimensional system arising when an Allee function is coupled with a function describing the population decay in a so-called sink. New types of bifurcation phenomena are discovered and explained. The relevance of the results for metapopulation dynamics is discussed.     

A Bayesian molecular interaction library

We describe a library of molecular fragments designed to model and predict non-bonded interactions between atoms. We apply the Bayesian approach, whereby prior knowledge and uncertainty of the mathematical model are incorporated into the estimated model and its parameters. The molecular interaction data are strengthened by narrowing the atom classification to 14 atom types, focusing on independent molecular contacts that lie within a short cutoff distance, and symmetrizing the interaction data for the molecular fragments. Furthermore, the location of atoms in contact with a molecular fragment are modeled by Gaussian mixture densities whose maximum a posteriori estimates are obtained by applying a version of the expectation-maximization algorithm that incorporates hyperparameters for the components of the Gaussian mixtures. A routine is introduced providing the hyperparameters and the initial values of the parameters of the Gaussian mixture densities. A model selection criterion, based on the concept of a `minimum message length' is used to automatically select the optimal complexity of a mixture model and the most suitable orientation of a reference frame for a fragment in a coordinate system. The type of atom interacting with a molecular fragment is predicted by values of the posterior probability function and the accuracy of these predictions is evaluated by comparing the predicted atom type with the actual atom type seen in crystal structures. The fact that an atom will simultaneously interact with several molecular fragments forming a cohesive network of interactions is exploited by introducing two strategies that combine the predictions of atom types given by multiple fragments. The accuracy of these combined predictions is compared with those based on an individual fragment. Exhaustive validation analyses and qualitative examples (e.g., the ligand-binding domain of glutamate receptors) demonstrate that these improvements lead to effective modeling and prediction of molecular interactions.     

Equations with infinite delay: Blending the abstract and the concrete

Using perturbation theory for adjoint semigroups (a modification of sun-star calculus) we prove, in the case of infinite delay, the principle of linearized stability for nonlinear renewal equations, delay-differential equations and coupled systems of these two types of equations. Our results extend those of Diekmann et al. (1995) [13] and Diekmann et al. (2007) [14] to the case of infinite delay.     

One Dimensional Reduction of a Renewal Equation for a Measure-Valued Function of Time Describing Population Dynamics

Acta Applicandae Mathematicae - This paper study the type of integrability of differential systems with separable variables $\dot{x}=h\left (x\right )f\left (y\right )$ , $\dot{y}= g\left (y\right...