Theoretical Perspectives in Organocatalysis

It is clear that the field of organocatalysis is continuously expanding during the last decades. With increasing computational capacity and new techniques, computational methods have provided a more economic approach to explore different chemical systems. This review offers a broad yet concise overview of current state-of-the-art studies that have employed novel strategies for catalyst design. The evolution of the all different theoretical approaches most commonly used within organocatalysis is discussed, from the traditional approach, manual-driven, to the most recent one, machine-driven.     

DABCOnium: An Efficient and High‐Voltage Stable Singlet Oxygen Quencher for Metal–O2 Cells

Singlet oxygen (¹O₂) causes a major fraction of the parasitic chemistry during the cycling of non‐aqueous alkali metal‐O₂ batteries and also contributes to interfacial reactivity of transition‐metal oxide intercalation compounds. We introduce DABCOnium, the mono alkylated form of 1,4‐diazabicyclo[2.2.2]octane (DABCO), as an efficient ¹O₂ quencher with an unusually high oxidative stability of ca. 4.2 V vs. Li/Li⁺. Previous quenchers are strongly Lewis basic amines with too low oxidative stability. DABCOnium is an ionic liquid, non‐volatile, highly soluble in the electrolyte, stable against superoxide and peroxide, and compatible with lithium metal. The electrochemical stability covers the required range for metal–O₂ batteries and greatly reduces ¹O₂ related parasitic chemistry as demonstrated for the Li–O₂ cell.     

Electrochemical Oxidation of Lithium Carbonate Generates Singlet Oxygen

Solid alkali metal carbonates are universal passivation layer components of intercalation battery materials and common side products in metal‐O₂ batteries, and are believed to form and decompose reversibly in metal‐O₂/CO₂ cells. In these cathodes, Li₂CO₃ decomposes to CO₂ when exposed to potentials above 3.8 V vs. Li/Li⁺. However, O₂ evolution, as would be expected according to the decomposition reaction 2 Li₂CO₃→4 Li⁺+4 e^?+2 CO₂+O₂, is not detected. O atoms are thus unaccounted for, which was previously ascribed to unidentified parasitic reactions. Here, we show that highly reactive singlet oxygen (¹O₂) forms upon oxidizing Li₂CO₃ in an aprotic electrolyte and therefore does not evolve as O₂. These results have substantial implications for the long‐term cyclability of batteries: they underpin the importance of avoiding ¹O₂ in metal‐O₂ batteries, question the possibility of a reversible metal‐O₂/CO₂ battery based on a carbonate discharge product, and help explain the interfacial reactivity of transition‐metal cathodes with residual Li₂CO₃.     

Titanium dioxide nanoparticle coating of polymethacrylate-based chromatographic monoliths for phosphopetides enrichment

Metal oxide affinity chromatography has been one of the approaches for specific enrichment of phosphopeptides from complex samples, based on specific phosphopeptide adsorption forming bidentate chelates between phosphate anions and the surface of a metal oxide, such as TiO₂, ZrO₂, Fe₂O₃, and Al₂O₃. Due to convective mass transfer, flow-independent resolution and high dynamic binding capacity, monolith chromatographic supports have become important in studies where high resolution and selectivity are required. Here, we report the first synthesis and characterization of immobilisation of rutile TiO₂ nanoparticles onto organic monolithic chromatographic support (CIM-OH-TiO₂). We demonstrate the specificity of CIM-OH-TiO₂ column for enrichment of phosphopeptides by studying chromatographic separation of model phosphorylated and nonphosphorylated peptides as well as proving the phosphopeptide enrichment of digested bovine α-casein. The work described here opens the possibility for a faster, more selective enrichment of phosphopeptides from biological samples that will enable future advances in studying protein phosphorylation.     

Growth of pentacene on Ag(1 1 1) surface: A NEXAFS study

Thin films of pentacene (C₂₂H₁₄) have become widely used in the field of organic electronics. Here films of C₂₂H₁₄ of thickness ranging from submonolayer to multilayer were thermally deposited on Ag(1 1 1) surface. The determination of molecular geometry in pentacene films on Ag(1 1 1) studied by X-ray absorption at different stages of growth up to one monolayer is presented.XAS spectra at the C K-edge were collected as a function of the direction of the electric field at the surface. The different features of the spectra were assigned to resonances related to the various molecular unoccupied states by the comparison with the absorption coefficient of the pentacene gas phase. The transitions involving antibonding π states show a pronounced angular dependence for all the measured coverages, from submonolayer to multilayer. The spectra analysis indicates a nearly planar chemisorption of the first pentacene layer with a tilt angle of 10°.     

Structure and properties of 1,4-benzenedimethanethiol films grown from solution on Au(1 1 1): An XPS and NEXAFS study

Core level photoemission and X-ray absorption at the carbon C 1s edge are applied to the study of chemisorption of 1,4-benzenedimethanethiol molecules on Au(1 1 1) and to investigate the effect of the solvent used to prepare the organic films. 1,4-Benzenedimethanethiol films were prepared in polar and non-polar solvents, i.e. ethanol, methanol and n-hexane. 1,4-Benzenedimethanethiol molecules are anchored to the substrate through a single S-Au bond; the molecules in the films tend to assume an upright orientation, the aromatic ring resulting tilted towards the direction perpendicular to the substrate plane. The films present an effective thickness corresponding to more than a single layer. Only small differences are observed among behaviours in different solvents. It is concluded that the final properties and conformation of the 1,4-benzenedimethanethiol films are largely determined by the reciprocal interactions between the molecules and with the substrate.     

Selten‐Erd‐Metall‐Koordinationspolymere: Synthesen und Kristallstrukturen von drei neuen Glutaraten, [Pr2(Glu)3(H2O)4] · 10,5H2O, [Pr(Glu)(H2O)2]Cl und [Er(Glu)(GluH)(H2O)2]

Rare‐Earth‐Metal Coordination Polymers: Syntheses and Crystal Structures of Three New Glutarates, [Pr₂(Glu)₃(H₂O)₄] · 10.5H₂O, [Pr(Glu)(H₂O)₂]Cl, and [Er(Glu)(GluH)(H₂O)₂] The new rare‐earth dicarboxylates [Pr₂(Glu)₃(H₂O)₄] · 10.5H₂O ( 1 ), [Pr(Glu)(H₂O)₂]Cl ( 2 ) and [Er(Glu)(GluH)(H₂O)₂] ( 3 ) were obtained from the reactions of glutaric acid with PrCl₃·6H₂O and Er(OH)₃, respectively. The crystal structures were determined by single‐crystal X‐ray diffraction. [Pr₂(Glu)₃(H₂O)₄] · 10,5H₂O crystallizes in the orthorhombic space group Pnma (no. 62) with a = 871.7(4), b = 3105.0(9), c = 1308.3(9) pm and Z = 4. The crystals of [Pr(Glu)(H₂O)₂]Cl are monoclinic (I2/a; no. 15) with a = 786.2(1), b = 1527.6(2) c = 801.2(1) pm, β = 99.78(1)° and Z = 4. [Er(Glu)(GluH)(H₂O)₂] crystallizes in the monoclinic space group P2₁/a (no. 14) with lattice parameters of a = 882.4(1), b = 1375.3(2), c = 1267.4(2) pm, β = 107.13(1)° and Z = 4. The rare‐earth cations have the coordination numbers 10 ( 1 ), 8 + 1 ( 2 ) and 9 ( 3 ). The individual polyhedra are connected to chains and further to sheets in 1 and 2 and to double chains in 3 . Only in the water‐rich compound 1 there are channels that contain crystal water molecules. It, therefore, has a considerably lower density than 2 and 3 .     

Characterisation of grafted weak anion-exchange methacrylate monoliths

A weak ion-exchange grafted methacrylate monolith was prepared by grafting a methacrylate monolith with glycidyl methacrylate and subsequently modifying the epoxy groups with diethylamine. The thickness of the grafted layer was determined by measuring permeability and found to be approximately 90nm. The effects of different buffer solutions on the pressure drop were examined and indicated the influence of pH on the permeability of the grafted monolith. Protein separation and binding capacity (BC) were found to be flow-unaffected up to a linear velocity of 280cm/h. A comparison of the BC for the non-grafted and grafted monolith was performed using beta-lactoglobulin, bovine serum albumin (BSA), thyroglobulin, and plasmid DNA (pDNA). It was found that the grafted monolith exhibited 2- to 3.5-fold higher capacities (as compared to non-grafted monoliths) in all cases reaching values of 105, 80, 71, and 17mg/ml, respectively. It was determined that the maximum pDNA capacity was reached using 0.1M NaCl in the loading buffer. Recovery was comparable and no degradation of the supercoiled pDNA form was detected. Protein z-factors were equal for the non-grafted and grafted monolith indicating that the same number of binding sites are available although elution from the grafted monolith occurred at higher ionic strengths. The grafted monolith exhibited lower efficiency than the non-grafted ones. However, the baseline separation of pDNA from RNA and other impurities was achieved from a real sample.     

Use of Gemini surfactants to stabilize TiO2 P25 colloidal dispersions

Photocatalytically active TiO₂ P25 nanoparticles, widely used for practical applications, were investigated. The nominal size of TiO₂ P25 nanoparticles is 21 nm, but they easily agglomerate in aqueous media, depending on pH and ionic strength. TiO₂ P25 aqueous dispersions were stabilized by alkanediyl-α,ω-bis-N-dodecyl-N, N′-dimethyl-ammonium bromide, cationic Gemini surfactant. The optimal conditions required to obtain stable dispersions, without formation of large agglomerates, were experienced. The stabilization of TiO₂ P25 nanoparticles by cationic Gemini surfactant was investigated in some details. Different amounts of Gemini surfactant were used, at concentrations between 1.0 and 250 × 10⁻⁶ mol L⁻¹, well below the critical micelle concentration. Dynamic light scattering and zeta potential analyses estimated the particle size and the dispersions stability. When the proper amount of Gemini surfactant was used, the resulting nanoparticles were still poly-disperse, but large agglomerates disappeared and were remarkably redispersible.     

Comparison of CIM~ C4-HLD monolithic column with Sartobind phenyl membrane column for pIDKE2 purification

The main component of the Center for Genetic Engineering and Biotechnology(CIGB)candidate vaccine against Hepatitis C virus(HCV)is the pIDKE2 plasmid.The current designed downstream process for the production of pIDKE2 fulfils all regulatory requirements and renders the required quantities of pharmaceuticalgrade plasmid DNA(pDNA)with 95%purity.The advantages of this procedure include high plasmid purity and the elimination of undesirable additives,such as toxic organic extractants and animal-derived enzymes.However,yields and consequently the productivity of the process are low.Previous work demonstrated that the most critical step of the process is the reverse phase chromatography,where conventional porous particle resins are used.Therefore,to increase the process productivity,alternative technologies such as membranes and chromatographic monoliths were tested as alternative options for this critical step.Here,a comparison between the behaviors of CIM~ C4-HLD and Sartobind phenyl matrices was performed.To obtain higher productivities and purities,the dynamic binding capacities and selectivities were evaluated.The results showed that both matrices had a similar capacity for pIDKE2 plasmid,but the separation of pDNA isoforms using CIM~ technology was much better than that with Sartobind.Additionally,the optimal conditions for loading plasmid DNA on a CIMC4-HLD 800-mL monolithic column in a real production process were determined.These optimizations will allow production levels to satisfy the high plasmid consumption demanded by clinical trials.