Analysis of Colubroidea snake venoms by liquid chromatography with mass spectrometry: evolutionary and toxinological implications

The evolution of the venomous function of snakes and the diversification of the toxins has been of tremendous research interest and considerable debate. It has become recently evident that the evolution of the toxins in the advanced snakes (Colubroidea) predated the evolution of the advanced, front-fanged delivery mechanisms. Historically, the venoms of snakes lacking front-fanged venom-delivery systems (conventionally grouped into the paraphyletic family Colubridae) have been largely neglected. In this study we used liquid chromatography with mass spectrometry (LC/MS) to analyze a large number of venoms from a wide array of species representing the major advanced snake clades Atractaspididae, Colubrinae, Elapidae, Homalopsinae, Natricinae, Psammophiinae, Pseudoxyrhophiinae, Xenodontinae, and Viperidae. We also present the first sequences of toxins from Azemiops feae as well as additional toxin sequences from the Colubrinae. The large body of data on molecular masses and retention times thus assembled demonstrates a hitherto unsuspected diversity of toxins in all lineages, having implications ranging from clinical management of envenomings to venom evolution to the use of isolated toxins as leads for drug design and development. Although definitive assignment of a toxin to a protein family can only be done through demonstrated structural studies such as N-terminal sequencing, the molecular mass data complemented by LC retention information, presented here, do permit formulation of reasonable hypotheses concerning snake venom evolution and potential clinical effects to a degree not possible till now, and some hypotheses of this kind are proposed here. The data will also be useful in biodiscovery.     

Formation of homogeneous nanocomposite films at ambient temperature via miniemulsion polymerization using graphene oxide as surfactant

A convenient and industrially scalable method for synthesis of homogeneous nanocomposite films comprising poly(styrene‐stat‐butyl acrylate) and nanodimensional graphene oxide (GO) or reduced GO (rGO) is presented. Importantly, the nanocomposite latex undergoes film formation at ambient temperature, thus alleviating any need for high temperature or high pressure methods such as compression molding. The method entails synthesis of an aqueous nanocomposite latex via miniemulsion copolymerization relying on nanodimensional GO sheets as sole surfactant, followed by ambient temperature film formation resulting in homogeneous film. For comparison, a similar latex obtained by physical mixing of a polymer latex with an aqueous GO dispersion results in severe phase separation, illustrating that the miniemulsion approach using GO as surfactant is key to obtaining homogeneous nanocomposite films. Finally, it is demonstrated that the GO sheets can be readily reduced to rGO in situ by heat treatment of the film. © 2017 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2017 , 55, 2289–2297     

One-dimensional beam ordering of protons in a storage ring

The ordering of protons has been observed at a new storage ring, S-LSR, at Kyoto University. Abrupt jumps in the momentum spread and the Schottky noise power were observed for protons for the first time at a particle number of approximately 2000, upon applying electron cooling with electron currents of 25, 50, and 100 mA. The transition temperature was 0.17 and 1 meV in the longitudinal and transverse directions, respectively. The transverse temperature of the proton beam was much below that of electrons at the transition, which played an essential role in the ordering of protons.     

Prime Ideal Factorization in a Number Field via Newton Polygons

Czechoslovak Mathematical Journal - Let K be a number field defined by an irreducible polynomial F(X) ∈ ?[X] and ?K its ring of integers. For every prime integer p, we give...     

Determination of nanomole quantities of lower aldehydes by cold-vapour atomic absorption spectrometry

A method is described for the determination of 10–100 nmole of methanal and 20–150 nmole of ethanal and propanal. The method is based on the oxidation of aldehydes to the corresponding acids by mercuric ion which in turn is reduced to elemental mercury, followed by cold-vapour atomic absorption spectrometry. Calibration plots were constructed between the concentration of each aldehyde and absorbance, while the calibration from the conventional cold vapour procedure was used for total aldehydes determination. The method is selective and can be used for aldehyde determination in the presence of ketones, acetals, alcohols, acids, esters, ethers, organic chlorides and epoxides. This simple method is characterised by 98–102% recoveries and standard deviations of 3%.     

Quantum‐Transport Characteristics of a p–n Junction on Single‐Layer TiS3

By using density functional theory and non‐equilibrium Green′s function‐based methods, we investigated the electronic and transport properties of a TiS₃ monolayer p–n junction. We constructed a lateral p–n junction on a TiS₃ monolayer using Li and F adatoms. An applied bias voltage caused significant variability in the electronic and transport properties of the TiS₃ p–n junction. In addition, the spin‐dependent current–voltage characteristics of the constructed TiS₃ p–n junction were analyzed. Important device characteristics were found, such as negative differential resistance and rectifying diode behaviors for spin‐polarized currents in the TiS₃ p–n junction. These prominent conduction properties of the TiS₃ p–n junction offer remarkable opportunities for the design of nanoelectronic devices based on a recently synthesized single‐layered material.     

A Dedekind Criterion over Valued Fields

Siberian Mathematical Journal - Let $ (K,\nu) $ be an arbitrary-rank valued field, let  $ R_{\nu} $ be the valuation ring of  $ (K,\nu) $ , and let  $ K(\alpha)/K $ be...     

Method of micro-sampling human dentine collagen for stable isotope analysis

Rationale

Sampling of dentine for stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope ratios in the direction of tooth growth allows the study of temporal changes to the diet and physiological stress of an individual during tooth formation. Current methods of sampling permanent teeth using 1 mm increments provide temporal resolution of 6–9 months at best depending on the tooth chosen. Although this gives sufficient sample sizes for reliable analysis by mass spectrometry, sectioning the dentine across the incremental structures results in a rolling average of the isotope ratios. A novel method of incremental dentine collagen sampling has been developed to decrease the collagen increment size to 0.35 mm along the incremental structures, thus reducing averaging and improving the temporal resolution of short-term changes within the δ¹³C and δ¹⁵N values.

Methods

This study presents data for a MicroMill-assisted sampling method that allows for sampling at 0.35 mm width × 1 mm depth increments following the incremental growth pattern of dentine. A NewWave MicroMill was used to sample the demineralised dentine section of modern donated human third molars from Sudan and compared to data from the same teeth using the 1 mm incremental sectioning method 2 established by Beaumont et al.

Results

The δ¹³C and δ¹⁵N isotopic data showed an increased temporal resolution, with each increment providing data for 2–4 months of dentine formation.

Conclusions

The data show the potential of this method for studying dietary reconstruction, nutritional stress, and physiological change with greater temporal resolution potentially to seasonal level and with less attenuation of the δ¹³C and δ¹⁵N values than was previously possible from human dentine.

     

An inverse problem in reaction kinetics

In this paper we investigate the problem of extracting information about chemical reactions involving multiple species from the time history of the concentration of each species. The mathematical model of the kinetic system leads to a system of ordinary differential equations. Our focus is to examine whether the species’ concentrations as functions of time are sufficient to determine what chemical reactions, and at what reaction rates, have occurred. We show that within the limitation of our model, there may be many candidate reaction systems that could explain the data. Using the notion of sparsity, we provide a quantitative assessment of the question of distinguishability. We further demonstrate that sparsity enforcing approaches, such as minimizing the ℓ ₁ or the ℓ ₀ norms are not reliable. Our conclusion is that additional knowledge about the kinetic system will be necessary to reliably solve this inverse problem.     

Space-Time Transfer Function-Noise Modelling of Rainfall-Runoff Process

An explanatory model class belonging to the family of Space-Time Transfer Function-Noise (STTFN) process is presented. The paper develops a three-stage iterative procedure for building STTFN models of the rainfall-runoff process. Four precipitation and runoff stations located in a watershed in southern Ontario, Canada, sampled at 15-day intervals are used for the numerical analysis. Three STTF models are identified. The model parameters are estimated by the polytope technique, a nonlinear optimization algorithm. Two of the developed space-time models proved adequate in describing the spatio-temporal characteristics of precipitation and runoff time series.