Effect of ionic strength on the self-assembly, morphology and gelation of pH responsive β-sheet tape-forming peptides

Molecular self-assembly is an intrinsic property of proteins central to their biological functionality. One important industrially interesting property is the ability to control and switch on and off self-assembly using a variety of external chemical and physical triggers. Model peptides have been developed with significantly reduced chemical and structural complexity compared to biological proteins. These are ideal systems for exposing the fundamental principles that drive protein-like self-assembly, as well as for establishing in a quantitative manner their structure-function relationship. We investigate simple, short model peptides that adopt a purely β-strand conformation, align in an antiparallel manner and self-assemble in one dimension in solution into long β-sheet nanotapes and higher order aggregates with no other conformation (i.e., helices, turns or random coils) present in the aggregates. These micrometre-long nanostructures gel in solutions at concentrations as low as 0.2% v/v. Their gel-fluid transition has been previously shown to be controlled by pH, temperature, or by mixing with complementary peptides. Here we show the dramatic effect of another chemical trigger, that of physiological-like salt concentration, on the self-assembly, morphology and gelation of a series of systematically designed charged self-assembling tape-forming peptides, each 11 amino acid residues in length, in the pH range of 2-14. This study provides a detailed understanding of the self-assembly of this class of peptides in aqueous solutions of biologically relevant pH and ionic strength. This insight has led to the development of injectable self-assembling peptide lubricants as potential therapeutics for the treatment of early stage knee joint osteoarthritis.     

Magnetic rotation observation of the C2b3Σg− ← a3Πu transition using a color center laser

The magnetic rotation observation of the C₂b³Σ_g^? ← a³Π_u Ballik-Ramsay system using a color center laser is reported. This is the first detection of this system in absorption. Three bands, 0 ← 1, 1 ← 2, and 2 ← 3, were identified in the spectral range 3650–4030 cm^?1. The last two bands were observed for the first time. In magnetic rotation many satellite lines (ΔN ≠ ΔJ) which would be very weak in normal absorption have been observed with intensity comparable to the main branch lines. This permits a slight improvement in the accuracy of some of the fine structure constants. A variety of lineshapes are observed for the various branches by magnetic rotation. Because the b³Σ_g^? fine structure is small, giving a partial overlap, the peak frequency of a magnetic rotation signal usually does not correspond to the center frequency of the normal absorption signal of that transition. A computer program has been written to predict magnetic rotation lineshapes and obtain the peak frequency displacements. Various observed and calculated lineshapes are displayed and compared.     

Coherent reflection in a two-dimensional cochlea: Short-wave versus long-wave scattering in the generation of reflection-source otoacoustic emissions

The theory of coherent reflection filtering explains the empirical form of the cochlear reflectance by showing how it emerges from the coherent "backscattering" of forward-traveling waves by impedance perturbations in the mechanics of the cochlear partition. Since the theory was developed using the one-dimensional (1-D) transmission-line model of the cochlea, an obvious logical shortcoming is the failure of the long-wavelength approximation near the peak of the traveling wave, where coherent backscattering is purported to occur. Indeed, existing theory suggests that wave reflection may be strongly suppressed in the short-wave regime. To understand how short-wave behavior near the peak modifies the predictions of the long-wave theory, this paper solves the scattering problem in the 2-D cochlear model. The 2-D problem is reduced to a 1-D wave equation and the solution expressed as an infinite series in which successive terms arise via multiple scattering within the cochlea. The cochlear reflectance is computed in response-matched models constructed by solving the inverse problem to control for variations in mechanical tuning among models of different heights and dimensionality. Reflection from the peak region is significantly enhanced by the short-wave hydrodynamics, but other conclusions of the 1-D analysis--such as the predicted relation between emission group delay and the wavelength of the traveling wave--carry over with only minor modifications. The results illustrate the important role of passive hydromechanical effects in shaping otoacoustic emissions and cochlear tuning.     

Chromatographic separation of americium from europium using bis-2,6-(5,6,7,8-tetrahydro-5,9,9-trimethyl-5,8-methano-1,2,4-benzotriazin-3-yl) pyridine

The separation of americium(III) from europium(III) was achieved utilizing a bis-2,6-(5,6,7,8-tetrahydro-5,9,9-trimethyl-5,8-methano-1,2,4-benzotriazin-3-yl) pyridine (CA-BTP) chromatographic resin. The extraction chromatographic materials were prepared using various concentrations of CA-BTP. This new, hydrolytically stable extractant was impregnated on an inert polymeric support at 40% loading. The uptake of Am(III) and Eu(III) by this material from 0.1 to 4.0 M aqueous HNO₃ solutions was measured. The resulting dry weight distribution ratios, D _w , indicated a strong preference for Am(III) with little affinity for Eu(III). These results are similar to recently reported solvent extraction studies indicating a maximum uptake of Am(III) in the 0.5–1.0 M HNO₃ range. The resin preparation, performance, and characterization of the Am/Eu separation are reported herein.

     

Testing coherent reflection in chinchilla: Auditory-nerve responses predict stimulus-frequency emissions

Coherent-reflection theory explains the generation of stimulus-frequency and transient-evoked otoacoustic emissions by showing how they emerge from the coherent "backscattering" of forward-traveling waves by mechanical irregularities in the cochlear partition. Recent published measurements of stimulus-frequency otoacoustic emissions (SFOAEs) and estimates of near-threshold basilar-membrane (BM) responses derived from Wiener-kernel analysis of auditory-nerve responses allow for comprehensive tests of the theory in chinchilla. Model predictions are based on (1) an approximate analytic expression for the SFOAE signal in terms of the BM traveling wave and its complex wave number, (2) an inversion procedure that derives the wave number from BM traveling waves, and (3) estimates of BM traveling waves obtained from the Wiener-kernel data and local scaling assumptions. At frequencies above 4 kHz, predicted median SFOAE phase-gradient delays and the general shapes of SFOAE magnitude-versus-frequency curves are in excellent agreement with the measurements. At frequencies below 4 kHz, both the magnitude and the phase of chinchilla SFOAEs show strong evidence of interference between short- and long-latency components. Approximate unmixing of these components, and association of the long-latency component with the predicted SFOAE, yields close agreement throughout the cochlea. Possible candidates for the short-latency SFOAE component, including wave-fixed distortion, are considered. Both empirical and predicted delay ratios (long-latency SFOAE delay/BM delay) are significantly less than 2 but greater than 1. Although these delay ratios contradict models in which SFOAE generators couple primarily into cochlear compression waves, they are consistent with the notion that forward and reverse energy propagation in the cochlea occurs predominantly by means of traveling pressure-difference waves. The compelling overall agreement between measured and predicted delays suggests that the coherent-reflection model captures the dominant mechanisms responsible for the generation of reflection-source otoacoustic emissions.     

Structural studies of ammonium nitrate 1. Phases III,IV and V

The laser Raman spectra of NH₄NO₃ and ND₄NO₃ have been measured between 210 and 320 K. It is shown that the phase transition V → IV is probably a λ transition which occurs gradually between 210 and 256 K with an abrupt change at 256 K. The λ transition is due to rotational disorder of ammonium ions as shown by the localised disorder mode at 172 cm^?1. The spectrum of phase IV shows clear evidence of T and L components of the nitrate ion asymmetric stretch. This is inconsistent with the assigned space group Pmmn. An explanation based on a thermally inducted IV → III transition is proposed.     

Extraction of thiodiglycol from soil using pressurised liquid extraction

Thiodiglycol (TDG) is the predominant hydrolysis product of the chemical warfare agent sulfur mustard. The extraction of TDG was investigated using pressurised liquid extraction and the results compared for a variety of different solvents and soils. TDG was analysed underivatised by gas chromatography with flame photometric detection. A mixture of methanol-water (9:1), proved to be the most efficient extracting solvent for TDG at a temperature of 150 degrees C and 10 MPa.     

Practical polymer film characterisation using high performance XPS methods

Summary New features of laboratory XPS instrument design have resulted in large increases in sensitivity for microprobe style analysis (spatially keyed spectroscopy). These capabilities give access to XPS valence band and other high resolution information for polymer analysis on a routine basis. Examples of the practical use of these techniques are presented.     

Chromocene catalysts for ethylene polymerization: Scope of the polymerization

Chromocene deposited on silica supports of high surface area forms a highly active catalyst for polymerization of ethylene. Polymerization is believed to occur by a coordinated anionic mechanism previously outlined. The catalyst formation step liberates cyclopentadiene and leads to a new divalent chromium species containing a cyclopentadienyl ligand. The catalyst has a very high chain-transfer response to hydrogen which permits facile preparation of a full range of molecular weights. Catalyst activity increases with an increase in silica dehydration temperature, chromium content on silica, and ethylene reaction pressure. The temperature-activity profile is characterized by a maximum near 60°C, presumably caused by a deactivation mechanism involving silica hydroxyl groups. A value of 72 was estimated for the ethylene–propylene reactivity ratio (r₁). Linear, highly saturated polymers are normally prepared below 100°C. By contrast with other commercial polyethylenes, the chromocene catalyst produces polyethylenes of relatively narrow molecular weight distribution. Above 100°C, unsaturated, branched polymers or oligomers are formed by a simultaneous polymerization–isomerization process.     

Multiple internal reflections in the cochlea and their effect on DPOAE fine structure

In recent years, evidence has accumulated in support of a two-source model of distortion product otoacoustic emissions (DPOAEs). According to such models DPOAEs recorded in the ear canal are associated with two separate sources of cochlear origin. It is the interference between the contributions from the two sources that gives rise to the DPOAE fine structure (a pseudoperiodic change in DPOAE level or group delay with frequency). Multiple internal reflections between the base of the cochlea (oval window) and the DP tonotopic place can add additional significant components for certain stimulus conditions and thus modify the DPOAE fine structure. DPOAEs, at frequency increments between 4 and 8 Hz, were recorded at fixed f2/f1 ratios of 1.053, 1.065, 1.08, 1.11, 1.14, 1.18, 1.22, 1.26, 1.30, 1.32, 1.34, and 1.36 from four subjects. The resulting patterns of DPOAE amplitude and group delay (the negative of the slope of phase) revealed several previously unreported patterns in addition to the commonly reported log sine variation with frequency. These observed "exotic" patterns are predicted in computational simulations when multiple internal reflections are included. An inverse FFT algorithm was used to convert DPOAE data from the frequency to the "time" domain. Comparison of data in the time and frequency domains confirmed the occurrence of these "exotic" patterns in conjunction with the presence of multiple internal reflections. Multiple internal reflections were observed more commonly for high primary ratios (f2/f1 > or = 1.3). These results indicate that a full interpretation of the DPOAE level and phase (group delay) must include not only the two generation sources, but also multiple internal reflections.