Cooperative,Reversible Self‐Assembly of Covalently Pre‐Linked Proteins into Giant Fibrous Structures

We demonstrate a simple bioconjugate polymer system that undergoes reversible self‐assembling into extended fibrous structures, reminiscent of those observed in living systems. It is comprised of green fluorescent protein (GFP) molecules linked into linear oligomeric strands through click step growth polymerization with dialkyne poly(ethylene oxide) (PEO). Confocal microscopy, atomic force microscopy, and dynamic light scattering revealed that such strands form high persistence length fibers, with lengths reaching tens of micrometers, and uniform, sub‐100 nm widths. We ascribe this remarkable and robust form of self‐assembly to the cooperativity arising from the known tendency of GFP molecules to dimerize through localized hydrophobic patches and from their covalent pre‐linking with flexible PEO. Dissipative particle dynamics simulations of a coarse‐grained model of the system revealed its tendency to form elongated fibrous aggregates, suggesting the general nature of this mode of self‐assembly.     

Acidic‐pH‐Activatable Fluorescence Probes for Visualizing Exocytosis Dynamics

Live imaging of exocytosis dynamics is crucial for a precise spatiotemporal understanding of secretion phenomena, but current approaches have serious limitations. We designed and synthesized small‐molecular fluorescent probes that were chemically optimized for sensing acidic intravesicular pH values, and established that they can be used to sensitively and reliably visualize vesicular dynamics following stimulation. This straightforward technique for the visualization of exocytosis as well as endocytosis/reacidification processes with high spatiotemporal precision is expected to be a powerful tool for investigating dynamic cellular phenomena involving changes in the pH value.     

Crowning Proteins: Modulating the Protein Surface Properties using Crown Ethers

Crown ethers are small, cyclic polyethers that have found wide‐spread use in phase‐transfer catalysis and, to a certain degree, in protein chemistry. Crown ethers readily bind metallic and organic cations, including positively charged amino acid side chains. We elucidated the crystal structures of several protein‐crown ether co‐crystals grown in the presence of 18‐crown‐6. We then employed biophysical methods and molecular dynamics simulations to compare these complexes with the corresponding apoproteins and with similar complexes with ring‐shaped low‐molecular‐weight polyethylene glycols. Our studies show that crown ethers can modify protein surface behavior dramatically by stabilizing either intra‐ or intermolecular interactions. Consequently, we propose that crown ethers can be used to modulate a wide variety of protein surface behaviors, such as oligomerization, domain–domain interactions, stabilization in organic solvents, and crystallization.     

The Formation of Imidazolium Salt Intimate (Contact) Ion Pairs in Solution

1‐n‐Butyl‐2,3‐dimethylimidazolium (BMMI) ionic liquids (ILs) associated with different anions undergo H/D exchange preferentially at 2‐Me group of the imidazolium in deuterated solvents. This process is mainly related to the existence of ion pairs rather than the anion basicity. The H/D exchange occurs in solvents (CDCl₃ and MeCN for instance) in which intimate contact ion pairs are present and the anion possesses a labile H in its structure, such as hydrogen carbonate and prolinate. In D₂O, separated ion pairs are formed and the H/D exchange does not occur. A plausible catalytic cycle is that the IL behaves as a neutral base in the course of all H/D exchange processes. NMR experiments, density functional calculations, and molecular dynamics simulations corroborate these hypotheses.     

Ab Initio H2O in Realistic Hydrophilic Confinement

A protocol for the ab initio construction of a realistic cylindrical pore in amorphous silica, serving as a geometric nanoscale confinement for liquids and solutions, is presented. Upon filling the pore with liquid water at different densities, the structure and dynamics of the liquid inside the confinement can be characterized. At high density, the pore introduces long‐range oscillations into the water density profile, which makes the water structure unlike that of the bulk across the entire pore. The tetrahedral structure of water is also affected up to the second solvation shell of the pore wall. Furthermore, the effects of the confinement on hydrogen bonding and diffusion, resulting in a weakening and distortion of the water structure at the pore walls and a slowdown in diffusion, are characterized.     

TEMPO/固载化席夫碱铜配合物共催化剂在分子氧氧化苯甲醇过程中的催化性能

通过大分子反应,将苯甲醛(BA)和邻氨基苯酚(AP)形成的双齿席夫碱配基键合在交联聚甲基丙烯酸缩水甘油酯(CPGMA)微球表面,形成固载有席夫碱配基的载体微球BAAP-CPGMA,再通过与铜盐的配位螯合反应,制备了固载有席夫碱铜配合物的微球[Cu(BAAP)2]-CPGMA.将该固载化铜配合物与均相的2,2,6,6-四甲基哌啶氮氧自由基(TEMPO)构成共催化体系TEMPO/[Cu(BAAP)2]-CPGMA,应用于分子氧氧化苯甲醇的催化氧化过程.我们考察了该共催化体系的催化性能,并探索研究了催化氧化机理.实验结果表明,共催化体系TEMPO/[Cu(BAAP)2]-CPGMA可在温和条件下(室温、常压的氧气)高效地将苯甲醇氧化为苯甲醛(选择性100%,苯甲醛产率93%),并具有良好的循环使用性能.     

Infrared spectroscopy of N-methylacetamide in water from high-level QM/MM calculations简

The infrared(IR) spectra of the N-methylacetamide molecule in water are calculated by using the MD simulation with high-level QM/MM corrections. The B3LYP and MP2 levels with 6-311++G** basis set are used for the QM region, respectively. Our results show all IR spectra at the B3LYP level are well consistent with the corresponding MP2 results. A dynamical charge fluctuation is observed for each atom along the simulation trajectories due to the electrostatic polarization(EP) effects from surrounding solvent environment. We find that the QM/MM corrected IR spectra satisfactorily reproduce the experimental vibrational features of amide I–III modes.     

分子氧为氧化剂磷钒酸盐为催化剂超深度氧化脱除柴油中的二苯并噻吩

一种“双帽Keggin型”磷钒酸盐在温和的反应条件下以分子氧为氧化剂氧化二苯并噻吩至二苯并噻吩砜的反应中表现出很高的催化活性. 用溶剂萃取或者选择吸附等方法可轻易地将反应产生的二苯并噻吩砜从油品中除去. 这提供了一种新型的分子氧为氧化剂的超深度氧化脱硫方法.     

Effect of Molecular Weight on the Properties of Poly（butylene succinate）

Poly（butylene succinate） （PBS） with different molecular weight was synthesized from 1, 4-butanediol and succinic acid by direct melt condensation. The synthesized PBS was identified by IH-NMR and FTIR spectrometry. The molecular weight was calculated from the intrinsic viscosity, and its value was between 20000 and 70000. The crystallization behavior and crystal morphology as function of molecular weight were investigated by DSC and PLM, respectively. The mechanical properties and hydrolytic degradation behaviors related with change of molecular weight were also studied in this work. The results demonstrated that the properties of PBS were determined by both molecular weight and crystallization properties （crystallinity as well as crystal morphology）. Our work is important for the design and preparation of PBS with proper molecular weight for its practical application.