Purification of the specific immunoglobulin G1 by immobilized metal ion affinity chromatography using nickel complexes of chelating porous and nonporous polymeric sorbents based on poly(methacrylic esters). Effect of polymer structure

Ni2+ complexes of the chelating nonporous and porous bead sorbents based on methacrylic esters crosslinked with ethylene dimethacrylate were used in isolation of the horseradish peroxidase-specific immunoglobulin IgG1 from the crude mouse ascitic fluid by immobilized metal ion affinity chromatography (IMAC). Iminodiacetic and aspartic acids were attached to porous poly(glycidyl methacrylate) beads differing in size, morphology and chemical composition. Ethylenediaminetriacetic acid and quinolin-8-ol chelating groups were attached mainly to the surface hydroxyl groups in nonporous poly(diethylene glycol methacrylate) beads through spacers. The latter sorbents exhibited better kinetic characteristics than the former but a very low IgG1 sorption capacity. In a single-step IMAC procedure, the best efficiency in the specific IgG1 purification was obtained with porous sorbents (recovery 92%, purity 73%). Differences in IMAC separations are discussed from the point of view of morphology of polymer beads as well as of the type and concentration of chelating ligands.     

Conformational preferences driven by the C-methyl substituent in chelated o-diphenylphosphino-alpha-methyl-N,N-dimethylbenzylamine rhodium complexes

The stereochemistry of the chelate rings of a number of rhodium aminophosphine complexes is studied by NMR spectroscopy. The similarity in the variable-temperature behavior for the different compounds is consistent with them having in common highly preferred chelate ring conformations. The six-membered metallacycle of coordinated (R)-PN (PN = o-diphenylphosphino-alpha-methyl-N,N-dimethylbenzylamine) adopts a delta conformation in the solid state. NMR experiments indicate that this conformation is strongly favored in solution as well. The preferred sense of helicity is imposed by the absolute configuration of the stereogenic carbon atom on the ligand, which exerts an important steric control. The complex [Rh(TFB)((C(6)H(4)CHMeNMe(2))(2)P(C(6)H(4)CHMeNHMe(2)))](BF(4))(2).H(2)O.Me(2)CO crystallizes in the monoclinic space group P2(1) with a = 12.0548(11) A, b = 16.139(2) A, c = 12.1804(10) A, beta = 100.742(9) degrees, Z = 4.     

Selective Synthesis of Novel In and In3Sn Nanowires by an Organometallic Route at Room Temperature

No Abstract     

Kinetics of comet formation in single‐cell gel electrophoresis: Loops and fragments

We investigated the mechanisms of DNA exit during single‐cell gel electrophoresis (the comet assay) by measuring the kinetics of the comet tail formation. In the neutral comet assay, the rate of DNA exit was found to be dependent on the topological state of DNA, which was influenced by either ethidium bromide or a low radiation dose. The results clearly show that the comet tail is formed by extended DNA loops: the loop extension, being reversible when the DNA torsional constraint remains in the loops, is favored when the constraint is relaxed. The kinetics of the comet formation in the case of a high radiation dose points out that accumulation of the single‐strand breaks causes DNA fragmentation. In contrast to the neutral comet assay, the alkaline comet assay is not related to the chromatin loops. Our results imply that the alkaline treatment induces detachment of the loops from the nuclear matrix, and the comet tail is formed by ssDNA fragments, the ends of which are pulled out from the comet head by electric force. We suggest that the kinetic approach can be considered as an important improvement of the comet assay.     

Theoretical study of new acceptor and donor molecules based on polycyclic aromatic hydrocarbons

Functionalized polycyclic aromatic hydrocarbons (PAHs) are an interesting class of molecules in which the electronic state of the graphene-like hydrocarbon part is tuned by the functional group. Searching for new types of donor and acceptor molecules, a set of new PAHs has recently been investigated experimentally using ultraviolet photoelectron spectroscopy (UPS). In this work, the electronic structure of the PAHs is studied theoretically with the help of B3LYP hybrid density functionals. Using the ΔSCF method, electron binding energies have been determined which affirm, specify and complement the UPS data. Symmetry properties of molecular orbitals are analyzed for a categorization and an estimate of the related signal strength. While σ-like orbitals are difficult to detect in UPS spectra of condensed film, calculation provides a detailed insight into the hidden parts of the electronic structure of donor and acceptor molecules. In addition, a diffuse basis set (6-311++G**) was used to calculate electron affinity and LUMO eigenvalues. The calculated electron affinity (EA) provides a classification of the donor/acceptor properties of the studied molecules. Coronene-hexaone shows a high EA, comparable to TCNQ, which is a well-known classical acceptor. Calculated HOMO-LUMO gaps using the related eigenvalues have a good agreement with the experimental lowest excitation energies. TD-DFT also accurately predicts the measured optical gap.     

Elimination Voltammetry of Miniaturized Mercury Drop Electrodes

Elimination voltammetry with linear scan (EVLS) in connection with renewed mini‐ drop mercury electrodes provides valuable information about the character and kinetics of processes at electrode/electrolyte interfaces. Based on the experiment related to the hydrogen evolution, it is presented that the EVLS is more sensitive than other voltammetric methods. Using miniaturized mercury electrodes, the EVLS is capable of detecting the effect of spherical diffusion associated with both the scan rates and the size of an electrode drop.     

Surface plasmon resonance biosensor for determination of tetrodotoxin: prevalidation study

A label-free surface plasmon resonance biosensor method was applied to determine tetrodotoxin (TTX) in pufferfish matrixes using an antibody inhibition assay format. A prevalidation study was conducted to demonstrate the assay performance characteristics, such as selectivity, LOD, LOQ, repeatability, reproducibility, and accuracy. Three participating laboratories reported standard curves in buffer and pufferfish matrix. A set of blind samples with TTX spiked into buffer as well as in 10% pufferfish extract were analyzed. Additionally, three blind naturally contaminated samples were analyzed, and the results were compared to those obtained using a reference method (HPLC/electrospray ionization-selected reaction monitoring-MS). The developed method was demonstrated to be capable of detecting TTX in pufferfish matrix standard samples in a broad concentration range (2-9000 ng/mL) with an LOD of 1.5 ng/mL. Between-laboratory recovery values were in the range of 51-190% with a mean of 107%, and 64-180% with a mean of 103% for TTX-spiked samples in buffer and pufferfish matrix, respectively. Between-laboratory recoveries were in the satisfactory range of 101-119% for naturally contaminated samples. This robust, rapid, and noninvasive method may serve as an attractive alternative to established methods for detection of TTX in pufferfish extracts.     

Analysis of Phenolic Compounds in Lager Beers of Different Origin: A Contribution to Potential Determination of the Authenticity of Czech Beer

Beer contains a wide range of polyphenolic compounds originating mainly from malt and hops. In this work newly modified on-line coupled HPLC–photodiode-array (PDA)–MS methods were used for analysis of characteristic phenolic compounds in several Czech lager beers, in comparison with some foreign lager beers. After optimization of column type, elution mode, and gradient steepness, chromatography was performed with a Restek Ultra Aqueous, C₁₈ (5 μm, 250 mm × 4.6 mm) column at 30 °C and gradient elution using an optimized linear gradient of aqueous acetonitrile acidified with 1% acetic acid, at a flow rate 0.4 mL min^?1. In total, 49 compounds were identified. Eleven individual compounds, predominantly malt phenolics (gallic acid, (?)-catechin, epicatechin, ferulic acid, chlorogenic acid, morin, rutin, quercetin, caempherol, naringenin, and luteolin) were quantified by use of two detection techniques: MS with electrospray ionization and UV detection. Compared with foreign beers, Czech beers contained higher levels of most of the phenolic compounds; specific distributions of individual compounds were also observed. Experimental PDA results for individual polyphenols were evaluated statistically by modified cluster analysis. Because of very tight covariance of the data a new procedure was devised for correlation analysis. The set of beers analyzed can be divided into four clusters closely related to the origin of the and the technology used. It seems that some of the flavonoids have potential use in beer authenticity analysis.     

The role of self-assembling polypeptides in building nanomaterials

Polypeptides are functional biomolecules that play a key role in life science, where they can act as hormones and signaling molecules. They can self-assemble into a variety of nanostructures, including two dimensional (2D) lamellae, one dimensional (1D) nanofibrils and nanotubes, and zero dimensional (0D) nanospheres. The driving force behind these advanced nanomaterials involves weak non-covalent interactions that include hydrogen bonding, and hydrophobic and electrostatic interactions. Here we discuss each of the interactions in relation to self-assembly and provide examples of some novel applications in engineering materials, tissue engineering and nanoelectronics. The overall aim is to provide a comprehensive, yet easily accessible review of the known nanomaterials produced by self-assembling polypeptides, which may lead to the construction of more advanced polypeptide nanostructures for future applications.