Capillary zone electrophoresis of alpha-helical diastereomeric peptide pairs with anionic ion-pairing reagents

The present study uses an unique capillary electrophoresis (CE) approach, that we have termed ion-interaction capillary zone electrophoresis (II-CZE), for the separation of diastereomeric peptide pairs where a single site in the centre of the non-polar face of an 18-residue amphipathic alpha-helical peptide is substituted by the 19 L- or D-amino acids. Through the addition of perfluorinated acids at very high concentrations (up to 400 mM), such concentration levels not having been used previously in chromatography or CE, to the background electrolyte (pH 2.0), we have been able to achieve baseline resolution of all 19 diastereomeric peptide pairs with an uncoated capillary. Since each diastereomeric peptide pair has the same sequence, identical mass-to-charge ratio and identical intrinsic hydrophobicity, such a separation by CZE has previously been considered theoretically impossible. Excellent resolution was achieved due to maximum advantage being taken of even subtle disruption of peptide structure/conformation (due to the presence of D-amino acids) of the non-polar face of the amphipathic alpha-helix and its interaction with the hydrophobic anionic ion-pairing reagents. In addition, due to the excellent resolution of diastereomeric peptide pairs by this novel CZE approach, we have also been able to separate a mixture of these closely-related alpha-helical peptides.     

Uranium (III) scorpionates: synthesis and structure of [(TpMe2)2U[N(C6H5)2]] and [(TpMe2)2U[N(SiMe3)2]

Reaction of [(Tp(Me)2)(2)UI] with KNR(2) (R = C(6)H(5), SiMe(3)) in tetrahydrofuran (THF) afforded the monomeric trivalent actinide amide complexes [(Tp(Me)2)(2)U[N(C(6)H(5))(2)]], 1, and [(Tp(Me)2)(2)U[N(SiMe(3))(2)]], 2. The complexes have been fully characterized by spectroscopic methods and their structures were confirmed by X-ray crystallographic studies. In the solid state 1 and 2 exhibit distorted pentagonal bipyramidal geometries. The U-NR(2) bond lengths in both complexes are the same but in complex 2 the greater steric demands of the N(SiMe(3))(2) ligand led to elongated U-N(pz) bonds, especially those opposite the amido ligand.     

Mild metal-free syn-stereoselective ring opening of activated epoxides and aziridines with aryl borates

A conceptually new, simple and practical method for the syn-nucleophilic displacement of aryl and vinyl epoxides and aryl aziridines with (substituted) phenols, using aryl borates as activating nucleophiles under neutral conditions, is reported.     

Synthesis of 6,19-sulfamidate bridged pregnanes

Conformationally restrained substituted pregnane-20-one derivatives were obtained by an intramolecular nitrene addition onto a C-5/C-6 double bond involving a tethered C-19 sulfamoyl moiety. The resulting aziridine underwent regioselective nucleophilic ring opening at C-5 at room temperature with cyanide, fluoride, and acetate. In the isolated case of acetate, a reversal of regioselectivity was observed at higher temperatures, a result attributed to a rearrangement process involving aziridine ring opening at the C-5 position and subsequent migration of the acetyl moiety to C-6.     

5‐Butyl‐4‐(4,4,5,5‐tetra­methyl‐1,3,2‐dioxaborolan‐2‐yl)‐3‐(2,4,6‐tri­methyl­phenyl)­isoxazole

A novel [3+2]‐cyclo­addition reaction of alkynyl­boronates and nitrile oxides gave the title compound, C₂₂H₃₂BNO₃, as a single regioisomer. The X‐ray crystal structure analysis of this compound shows two independent mol­ecules in the asymmetric unit, each with approximately coplanar isoxazole and boronate rings.     

Surface Modification of Nitrile Rubber by Plasma Polymerization

Radio frequency plasma polymerization of vinylidene fluoride was used to modify the surface properties of nitrile rubber. The chemistry and frictional properties of the plasma films were characterized. FTIR transmission spectra and EDX analysis of plasma polymer films deposited on NaCl windows showed that the degree of fluorination of the plasma polymers increased as plasma power was increased from 25 to 50 W, and then decreased monotonically at higher powers. An estimation of the actual F/C ratio from EDX data indicated that the plasma polymer films contained approximately one fluorine atom for every 2–5 carbon atoms. Sliding friction tests on a Delrin countersurface showed that the coefficient of friction of the plasma treated rubbers was lower than untreated rubber, but slighly higher than rubber coated with silicone oil. Repetitive sliding friction testing showed that silicone oil treated samples had a longer lubricating lifetime than plasma treated samples. However, cyclic friction tests conducted with nitrile rubber o-rings yielded similar frictional behavior and lubricating lifetimes for silicone oil and plasma treatments. There was no correlation between chemical composition and the frictional and wear properties of the plasma films. Environmental scanning electron micrographs showed that the plasma films were brittle and tended to crack and flake off during wear testing.     

Sequence-defined positioning of amine and amide residues to control catechol driven wet adhesion

Catechol and amine residues, both abundantly present in mussel adhesion proteins, are known to act cooperatively by displacing hydration barriers before binding to mineral surfaces. In spite of synthetic efforts toward mussel-inspired adhesives, the effect of positioning of the involved functional groups along a polymer chain is not well understood. By using sequence-defined oligomers grafted to soft hydrogel particles as adhesion probes, we study the effect of catechol–amine spacing, as well as positioning relative to the oligomer terminus. We demonstrate that the catechol–amine spacing has a significant effect on adhesion, while shifting their position has a small effect. Notably, combinations of non-charged amides and catechols can achieve similar cooperative effects on adhesion when compared to amine and catechol residues. Thus, these findings provide a blueprint for the design of next generation mussel-inspired adhesives.

The catechol driven adhesion of precision macromolecules on glass surfaces is quantified by soft colloidal probe readout. Catechol moieties are shown to synergize with amine and amide residues depending on residue spacing and residue order.     

Microwave spectrum and rotational isomers of ethyl fluoroformate

The microwave spectrum of ethyl fluoroformate displays strong a-type R branch transitions from two rotameric forms. One species (extended form) has rotational constants A₀ = 9191.3(9) MHz, B₀ = 2112.61(1) MHz, C₀ = 1756.73(1) MHz which are consistent with a syn-anti (τ₁(OCOC) = 0°, r₂(cocc) = 180°) planar heavy atom structure. The second species (compact form) has rotational constants A₀ = 7760(3) MHz, B₀ = 2388.38(4) MHz, C₀ = 2102.47(3) MHz which are consistent with a syn-gauche (τ₁(ococ) = 0°, τ₂(cocc) ˜ 90°) structure. The two conformational forms have approximately equal energy (0 ± 40 cm⁻¹). Four vibrational satellites of the extended species have been analyzed yielding a torsional frequency around the O-ethyl bond of 70(10) cm⁻¹. Three vibrational satellites attributed to the O-ethyl torsion of the compact species have been analyzed yielding a vibrational frequency of 90(10) cm⁻¹. Approximate Fourier coefficients of a three term potential function for internal rotation about the O-ethyl bond have been determined. Vibrational satellites attributed to the first excited states of the O-ester torsion have been analyzed for both conformers. The torsional vibrational frequency around the O-ester bond is 110(15) cm⁻¹ for the extended conformers and 120(20) cm⁻¹ for the compact.     

Capillary electrophoresis of cationic random coil peptide standards: effect of anionic ion-pairing reagents and comparison with reversed-phase chromatography

The present study compares a charge/hydrophobicity capillary electrophoresis (CE) approach to reversed-phase high-performance liquid chromatography (RP-HPLC) for the separation of three series of four synthetic, random coil peptide standards. Each series has peptides of the same positive charge (+1, +2 and +3 series) and length but differing in hydrophobicity. Complete resolution of the 12 peptides was achieved via a novel CE approach: a capillary zone electrophoresis (CZE) mode effected a separation of identically charged peptides; within each charged group of peptides, the addition of perfluorinated acid anionic ion-pairing reagents allowed resolution of the peptides through a mechanism based on peptide hydrophobicity which we have termed ioninteraction (II)-CZE. The peak capacity and peptide resolution of this CE approach was superior to that of RP-HPLC and stresses an important role for CE for peptide/proteomic applications.     

Formation of organolithium hetero-aggregates [Li4Ar2(nBu)2] (Ar=C6H4CH(Me)NMe2-2) during the directed ortho-lithiation of [1-(dimethylamino)ethyl]benzene

(R)-[1-(Dimethylamino)ethyl]benzene reacts with nBuLi in a 1:1 molar ratio in pentane to quantitatively yield a unique hetero-aggregate (2 a) containing the lithiated arene, unreacted nBuLi, and the complexed parent arene in a 1:1:1 ratio. As a model compound, [Li(4)(C(6)H(4)CH(Me)NMe(2)-2)(2)(nBu)(2)] (2 b) was prepared from the quantitative redistribution reaction of the parent lithiated arene Li(C(6)H(4)CH(Me)NMe(2)-2) with nBuLi in a 1:1 molar ratio. The mono-Et(2)O adduct [Li(4)(C(6)H(4)CH(Me)NMe(2)-2)(2)(nBu)(2)(OEt(2))] (2 c) and the bis-Et(2)O adduct [Li(4)(C(6)H(4)CH(Me)NMe(2)-2)(2)(nBu)(2)(OEt(2))(2)] (2 d) were obtained by re-crystallization of 2 b from pentane/Et(2)O and pure Et(2)O, respectively. The single-crystal X-ray structure determinations of 2 b-d show that the overall structural motifs of all three derivatives are closely related. They are all tetranuclear Li aggregates in which the four Li atoms are arranged in an almost regular tetrahedron. These structures can be described as consisting of two linked dimeric units: one Li(2)Ar(2) dimer and a hypothetical Li(2)nBu(2) dimer. The stereochemical aspects of the chiral Li(2)Ar(2) fragment are discussed. The structures as observed in the solid state are apparently retained in solution as revealed by a combination of cryoscopy and (1)H, (13)C, and (6)Li NMR spectroscopy.