Voltammetric determination of aminobiphenyls at a boron-doped nanocrystalline diamond film electrode

Voltammetric behavior of 2-aminobiphenyl, 3-aminobiphenyl, and 4-aminobiphenyl at a boron-doped nanocrystalline diamond film electrode was investigated using cyclic voltammetry and differential pulse voltammetry. Optimum conditions have been found for the determination of those genotoxic substances by differential pulse voltammetry at the above given electrode in the concentration range of 2 × 10⁻⁷ to 1 × 10⁻⁵ mol/L.     

Peptide Charge Derivatization as a Tool for Early Detection of Preeclampsia by Mass Spectrometry—A Comparison with the ELISA Test

Early detection of any preeclampsia biomarkers may lower the risk of mortality, both for a mother and a child. Our study focuses on techniques for preeclampsia biomarker identification by comparing the results of a method using liquid chromatography mass spectrometry in multiple reaction monitoring mode (LC-MS/MS) with those by the enzyme-linked immunosorbent assay (ELISA) test, as well as by comparing the obtained results with clinical data. In the proposed LC-MS/MS method a tryptic digest peptide charge derivatization strategy was used as a tool for sensitive detection of podocin, i.e., a previously discovered preeclampsia biomarker present in urine samples from pregnant women. Urine samples from pregnant women with diagnosed preeclampsia were collected at different stages of pregnancy and from healthy subjects, and then were analyzed by ELISA test and the proposed method with LC-MS/MS. Charge derivatization of the ε amino group of C-terminal lysine residues in tryptic digests by 2,4,6-triphenylpyrylium salt was performed to increase the ionization efficiency in the LC-MS/MS mode. Podocin was identified at the early stage of pregnancy, while its detection using an ELISA test was not possible. The protocol for urine sample preparation was optimized. Our results show that the proposed method by LC-MS/MS in combination with peptide charge derivatization, provides an ultrasensitive tool for diagnosis of preeclampsia, and provides earlier detection than a clinical diagnosis or ELISA test. The proposed solution may revolutionize medical diagnostics.     

Optical Spectra of Oligofurans: A Theoretical Approach to the Transition Energies,Reorganization Energies,and the Vibronic Activity

There is experimental evidence of high vibronic activity that accompanies the allowed transition between the ground state and the lowest electronic singlet excited state of oligofurans that contain two, three, and four furan rings. The absorption and emission spectra of the three lowest oligofurans measured at liquid nitrogen temperature show distinct fine structures that are reproduced using the projection-based model of vibronic coupling (with Dushinsky rotation included) parameterized utilizing either Density Functional Theory (DFT, with several different exchange-correlation functionals) or ab initio (CC2) quantum chemistry calculations. Using as a reference the experimental data concerning the electronic absorption and fluorescence for the eight lowest oligofurans, we first analyzed the performance of the exchange-correlation functionals for the electronic transition energies and the reorganization energies. Subsequently, we used the best functionals alongside with the CC2 method to explore how the reorganization energies are distributed among the totally symmetric vibrations, identify the normal modes that dominate in the fine structures present in the absorption and emission bands, and trace their evolution with the increasing number of rings in the oligofuran series. Confrontation of the simulated spectra with the experiment allows for the verification of the performance of the selected DFT functionals and the CC2 method.     

Three new acid M+ arsenates and phosphates with multiply protonated As/PO4 groups

The crystal structures of caesium dihydrogen arsenate(V) bis[trihydrogen arsenate(V)], Cs(H₂AsO₄)(H₃AsO₄)₂, ammonium dihydrogen arsenate(V) trihydrogen arsenate(V), NH₄(H₂AsO₄)(H₃AsO₄), and dilithium bis(dihydrogen phosphate), Li₂(H₂PO₄)₂, were solved from single‐crystal X‐ray diffraction data. NH₄(H₂AsO₄)(H₃AsO₄), which was hydrothermally synthesized (T = 493 K), is homeotypic with Rb(H₂AsO₄)(H₃AsO₄), while Cs(H₂AsO₄)(H₃AsO₄)₂ crystallizes in a novel structure type and Li₂(H₂PO₄)₂ represents a new polymorph of this composition. The Cs and Li compounds grew at room temperature from highly acidic aqueous solutions. Li₂(H₂PO₄)₂ forms a three‐dimensional (3D) framework of PO₄ tetrahedra sharing corners with Li₂O₆ dimers built of edge‐sharing LiO₄ groups, which is reinforced by hydrogen bonds. The two arsenate compounds are characterized by a 3D network of AsO₄ groups that are connected solely via multiple strong hydrogen bonds. A statistical evaluation of the As—O bond lengths in singly, doubly and triply protonated AsO₄ groups gave average values of 1.70 (2) Å for 199 As—OH bonds, 1.728 (19) Å for As—OH bonds in HAsO₄ groups, 1.714 (12) Å for As—OH bonds in H₂AsO₄ groups and 1.694 (16) Å for As—OH bonds in H₃AsO₄ groups, and a grand mean value of 1.667 (18) Å for As—O bonds to nonprotonated O atoms.     

Polymer multilayer film formation studied by in situ ellipsometry and electrochemistry

Polyelectrolyte multilayer films adsorbed on gold surfaces were studied by combined ellipsometric and electrochemical methods. Multilayers were composed of “synthetic” (poly(4-styrenesulfonic acid) ammonium salt (PSS) and poly(allylamine hydrochloride) (PAH) (PSS/PAH)) and “semi-natural” (carboxymethyl cellulose (CMC) and chitosan (CHI) (CMC/CHI)) polyelectrolytes. It was found that only PSS/PAH Layer-by-Layer (LbL) assembled structures result in dense surface confined films that limit permeability of small molecules, such as ferri-/ferrocyanide. The PSS/PAH assemblies can be envisaged as films with pinholes, through which small molecules diffuse. During the LbL deposition process of these films a number of pinholes quickly decay. A representative pinhole diameter was found to be approximately 20 μm, which determines the diffusion of small molecules through LbL films, and yet remains constant when the film consists of a few LbL assembled polyelectrolyte bilayers. CMC/CHI LbL assemblies at gold electrode surfaces give very low density films, which do not limit the diffusion of ferri-/ferrocyanide between the surface of the electrode and the solution.     

Direct electron transfer reactions between human ceruloplasmin and electrodes

In an effort to find conditions favouring bioelectrocatalytic reduction of oxygen by surface-immobilised human ceruloplasmin (Cp), direct electron transfer (DET) reactions between Cp and an extended range of surfaces were considered. Exploiting advances in surface nanotechnology, bare and carbon-nanotube-modified spectrographic graphite electrodes as well as bare, thiol- and gold-nanoparticle-modified gold electrodes were considered, and ellipsometry provided clues as to the amount and form of adsorbed Cp. DET was studied under different conditions by cyclic voltammetry and chronoamperometry. Two Faradaic processes with midpoint potentials of about 400 mV and 700 mV vs. NHE, corresponding to the redox transformation of copper sites of Cp, were clearly observed. In spite of the significant amount of Cp adsorbed on the electrode surfaces, as well as the quite fast DET reactions between the redox enzyme and electrodes, bioelectrocatalytic reduction of oxygen by immobilised Cp was never registered. The bioelectrocatalytic inertness of this complex multi-functional redox enzyme interacting with a variety of surfaces might be associated with a very complex mechanism of intramolecular electron transfer involving a kinetic trapping behaviour.     

When UDG and hAPE1 Meet Cyclopurines. How (5′R) and (5′S) 5′,8-Cyclo-2′-deoxyadenosine and 5′,8-Cyclo-2′-deoxyguanosine Affect UDG and hAPE1 Activity?

Ionizing radiation is a factor that seriously damages cellular mechanisms/macromolecules, e.g., by inducing damage in the human genome, such as 5′,8-cyclo-2′-deoxypurines (cdPus). CdPus may become a component of clustered DNA lesions (CDL), which are notably unfavorable for the base excision repair system (BER). In this study, the influence of 5′S and 5′R diastereomers of 5′,8-cyclo-2′-deoxyadenosine (cdA) and 5′,8-cyclo-2′-deoxyguanosine (cdG) on the uracil-DNA glycosylase (UDG) and human AP site endonuclease 1 (hAPE1) activity has been taken under consideration. Synthetic oligonucleotides containing 2′-deoxyuridine (dU) and cdPu were used as a model of single-stranded CDL. The activity of the UDG and hAPE1 enzymes decreased in the presence of RcdG compared to ScdG. Contrary to the above, ScdA reduced enzyme activity more than RcdA. The presented results show the influence of cdPus lesions located within CDL on the activity of the initial stages of BER dependently on their position toward dU. Numerous studies have shown the biological importance of cdPus (e.g., as a risk of carcinogenesis). Due to that, it is important to understand how to recognize and eliminate this type of DNA damage from the genome.     

Microwave-enhanced solid-phase synthesis of N,N'-linked aliphatic oligoureas and related hybrids

A practical and efficient microwave-assisted solid-phase method for the synthesis of N,N'-linked oligoureas and related amide/urea hybrid oligomers, featuring the use of succinimidyl (2-azido-2-substituted ethyl) carbamate monomers, is reported. The rate enhancement of urea formation under microwave irradiation combined with the mild conditions of the phosphine-based azide reduction makes this approach very effective for routine synthesis of oligoureas and possibly for library production.