Anodic stripping voltammetry of sulphide at a nickel film: towards the development of a reagentless sensor

The determination of sulphide at an electrochemically generated nickel oxide layer at glassy carbon and screen-printed electrodes in acidic media has been examined and appraised. The NiO layer was found to produce a stripping-like signal to sulphide and gave a linear peak current response from 20 to 90 μM. The response was further enhanced by repetitive cycling allowing accumulation of nickel sulphide at the electrode surface such that lower micromolar levels of sulphide (i.e. 5 μM) can be determined. The response at the NiO layer to sulphide is shown to be reproducible over a period of 24 h, thereby offering the development of a disposable amperometric sensor for sulphide.     

On the origin of geminal regioselectivity in the ene reaction of singlet oxygen with substituted alkenes

The geminal regioselectivity observed in the ene reaction between singlet oxygen and alkenes with anion-stabilizing groups is rationalized on the basis of a perepoxide intermediate, in which in analogy to the nucleophilic attack on protonated epoxides, the perepoxide is opened preferentially at the C---O bond weakened by the substituent.     

A QM-MM interface between CHARMM and TURBOMOLE: implementation and application to systems in bulk phase and biologically active systems

The implementation of a hybrid QM-MM approach combining ab initio and density functional methods of TURBOMOLE with the molecular mechanics program package CHARMM is described. An interface has been created to allow data exchange between the two applications. With this method the efficient multiprocessor capabilities of TURBOMOLE can be utilized with CHARMM running as a single processor application. Therefore, features of nonparallel running code in CHARMM like the TRAVEL module for locating saddle points or VIBRAN for the calculation of second derivatives can be exploited by running the CPU intensive QM calculations in parallel. To test the methodology, several small systems are studied with both Hartree-Fock and density functional methods and varying QM-MM boundaries. Also, the computationally efficient RI-J method has been examined for use in QM-MM applications. A B(12) cofactor containing cobalt has been studied, to examine systems with a large QM region and transition metals. All tested methods perform satisfactory in comparison with pure quantum calculations. Additionally, algorithms for the characterization of saddle points have been tested for their potential use in QM-MM problems. The TRAVEL module of CHARMM has been applied to the Menshutkin reaction in the condensed phase, and a saddle point was located. This saddle point was verified by calculation of a steepest descent path connecting educt, transition state, and product, and by calculation of vibrational modes.     

Basis set and density functional dependence of vibrational Raman optical activity calculations

We present an extensive investigation of the dependence of the scattering intensity difference of right and left circularly polarized light observed in vibrational Raman optical activity (VROA) on the choice of basis set and exchange-correlation functional. These dependencies are investigated for five molecules for which accurate experimental data are available: (S)-methyloxirane, (R)-epichlorhydrin, (S)-glycidol, (M)-spiro[2,2]pentane-1,4-diene, and (M)-sigma-[4]-helicene. Calculations are presented using the SVWN exchange-correlation functional (LDA), the BLYP exchange-correlation functional, and the B3LYP hybrid functional, using six different basis sets: the cc-pVDZ, cc-pVTZ, aug-cc-pVDZ, aug-cc-pVTZ, Sadlej's polarized basis set, and a minimal VROA basis set recently proposed by Zuber and Hug. It is demonstrated that results from pure gradient-corrected and hybrid functionals are comparable and that the aug-cc-pVDZ and aug-cc-pVTZ basis sets yield similar results. Furthermore, the combination of the small basis set by Zuber and Hug with an accurate force field represents the best compromise between computational accuracy and computational efficiency.     

Immunoaffinity screening with capillary electrochromatography

Highly efficient capillary electrochromatographic separations of cardiac glycosides and other steroids are presented. Employing butyl-derivatized silica particles as stationary phase resulted in a nearly three times faster electroosmotic flow (EOF) compared to capillary electrochromatography (CEC) with octadecyl silica particles. On-column focusing with a preconcentration factor of 180 was performed and separation efficiencies of up to 240,000 plates per meter were obtained. Using label-free standard UV absorbance, detection limits of 10-80 nM were reached for all steroids tested. For screening of cardiac glycosides, e.g., digoxin and digitoxin in mixtures of steroids, CEC was combined with immunoaffinity extraction using immobilized polyclonal anti-digoxigenin antibodies and F(ab) fragments. Simply adding small amounts of antibody carrying particles to the samples and comparing chromatograms before and after antibody addition allowed screening for high affinity antigens in mixtures with moderate numbers of compounds. Under conditions of competing antigens, affinity fingerprints of immobilized anti-digoxigenin and anti-digitoxin antibodies were obtained, reflecting the cross-reactivity of eleven steroids. The method provides high selectivity due to the combination of bioaffinity interaction with highly efficient CEC separation and UV detection at several wavelengths in parallel. This selectivity was exploited for the detection of four cardiac glycosides in submicromolar concentrations in an untreated urine sample.     

Voltammetric Detection of Free Sulfhydryl Compounds in Food Flours

Cyclic voltammetry has been applied to the rapid measurement of free SH‐compounds in food flours samples. The protocol is based on the electrochemical adaptation of the Ellman's test, where the DTNB reacts with SH‐compounds present in food flour extracts, resulting in the equimolar production of the electroactive compound TNBA which, in turns, reacts with phenylendiamine. The reaction is found to provide an analytical signal from which to quantify indirectly free sulfhydryl compounds in flours extracts.     

Die Addition von Säuren an Alkinderivate mit Push-pull-Gruppen,

The addition of proton acids as HF, HCl, HBr, HOAc and phenol to alkyne-derivatives of the type (CH₃)₂N? C?C? CO? R( 1 ) yielding the adducts 2 to 6 is investigated. The stereochemical course of the reaction is mainly influenced by the structure of the alkyne 1 . Kinetic investigations show that the rate of the third-order-reaction increases from 1 a (R?H) to 1 b (R ? CH₃) and 1 c (R ? OCH₃) and decreases drastically in polar solvents. According to these results a reaction mechanism is outlined and discussed.     

Prerequisites for peptidomic analysis of blood samples: II. Analysis of human plasma after oral glucose challenge -- a proof of concept

Mass spectrometric plasma analysis for biomarker discovery has become an exploratory focus in proteomic research: the challenges of analyzing plasma samples by mass spectrometry have become apparent not only since the human proteome organization (HUPO) has put much emphasis on the human plasma proteome. This work demonstrates fundamental proteomic research to reveal sensitivity and quantification capabilities of our Peptidomics technologies by detecting distinct changes in plasma peptide composition in samples after challenging healthy volunteers with orally administered glucose. Differential Peptide Display (DPD) is a technique for peptidomics studies to compare peptides from distinct biological samples. Mass spectrometry (MS) is used as a qualitative and quantitative analysis tool without previous trypsin digestion or labeling of the samples. Circulating peptides (< 15 kDa) were extracted from 1.3 mL plasma samples and the extracts separated by liquid chromatography into 96 fractions. Each fraction was subjected to MALDI MS, and mass spectra of all fractions were combined resulting in a 2D-display of > 2,000 peptides from each sample. Endogenous peptides that responded to oral glucose challenge were detected by DPD of pre-and post-challenge plasma samples from 16 healthy volunteers and subsequently identified by nESI-qTOF MS. Two of the 15 MS peaks that were significantly modulated by glucose challenge were subsequently identified as insulin and C-peptide. These results were validated by using immunoassays for insulin and C-peptide. This paper serves as a proof of principle for proteomic biomarker discovery down to the pM concentration range by using small amounts of human plasma.     

An insight into the aromaticity of fullerene anions: experimental evidence for diamagnetic ring currents in the five-membered rings of C(60)(6-) and C(70)(6-)

Reduction of the two "closed" [6,6] methanofullerenes, [6,6]C(61)H(2) (1) and [6,6]C(71)H(2) (5), to the corresponding hexaanions with lithium metal causes the bridgehead-bridgehead bonds to open, at least partially, and this change gives rise to diamagnetic ring currents in the resulting homoconjugated six-membered rings (6-MRs). These new ring currents shield the overlying hydrogen atoms on the methylene bridge and induce upfield shifts of 1.60 and 0.11 ppm in their (1)H NMR resonances, respectively. Analogous reduction of the already "open" [5,6]methanofullerenes, [5,6]C(61)H(2) (2) and [5,6]C(71)H(2) (3 and 4), only slightly enhances the shielding of the hydrogen atoms over the homoconjugated 6-MRs (upfield shifts of 0.13, 0.68, and 0.14 ppm, respectively) but leads to exceptionally strong diamagnetic ring currents in the homoconjugated five- membered rings (5-MRs), as evidenced by dramatic shielding of the hydrogen atoms situated over them (upfield shift of 5.01, 6.78, and 1.63 ppm, respectively). The strongest shielding is seen for the hydrogen atom sitting over the 5-MR at the pole of C(71)H(2)(6)(-) (delta = -0.255 ppm) indicating that the excess charge density is concentrated at the poles.     

Synthesis and characterization of Di-π-cyclopentadienyl- metal pentasulfides of titanium(IV) and vanadium (IV):an operational test of the influence of an unpaired electron on the molecular geometry

Our preparation of Ti(h⁵?C₅H₅)₂ S₅ by the reaction of elemental sulfur with Ti(h⁵?C₅H₅)₂(CO)₂ in hexane and of V(h⁵?C₅H₅)₂S₅?$\text{1}\text{2}$ H₂O by the reacti of V(h⁵?C₅H₅)₂ Cl₂ with Na₂S₅ in THF and structural analyses by single crystal X-ray diffraction (together with infrared, solution EPR, and temperaturedependent magnetic susceptibility measurements) represent an extension of our previous work on M(h⁵?C₅H₅)₂ (SC₆H₅)₂ (M = Ti, V). The crystallographic results provide further support of our previous conclusions that the Ballhausen—Dahl model is not valid for M(h⁵?C₅H₅)₂L₂ systems. The structuralfeatures of the chair-like titanium and vanadium pentasulfide molecules are compared to the corresponding phenylmercapto analogs and to the chair-like cyclohexasulfur molecule in rhombohedral sulfur. Ti(h⁵?C₅H₅)₂S₅ was isolated as a mixture of monoclinic and orthorhombic Crystalline phases-which were both characterized by preliminary X-ray data. A complete Structural determination and refinement of the monoclinic phase, which contains two independent molecules in a cell of dimensions a 22.843(2), b 7.958(1), c 14.465(1) Å, β 90.074(4)° and symmetry P2₁/c, yielded R₁ 5.3 % and R₂ 5.9 % for 2168 independent diffractometry-collected data with I≥ 2.5o(I). V(h⁵?C₅H₅)₂S₅-$\text{1}\text{2}$ H₂O contains four V(h⁵?C₅H₅)₂S₅ molecules and two water molecules of hydration (of crystallographic site symmetry C₂-2) in onorthorhombic unit cell of symmetry P2₁2₁2 and of dimensions a 13.491(1), b 12.748(1), c 7.715(1) Å. Least-squares refinement of 750 diffractometry data with I≥2.0σ(I) gave R₁ 2.4% and R₂ 3.0% Both of these compounds were independently synthesized and Spectroscopically characterized by Köpf and co-workers, and-a Complete X-ray diffraction study was performed by Epstein and Bernal on a different monoclinic phase of Ti(h⁵?C₅H₅)₂S₅ (isolated by-Köpf). An extraction of V(h⁵?C₅H₅)₂S₅ with re fluxing benzene under nitrogen atmosphere in a Soxhlet apparatus led to the formation of the previously reported [V₂ (h⁵?C₅H₅)₂S₅]_n compound which was characterized by physical measurements including a preliminary X-ray diffraction study.