Large-Eddy Simulations of Spray a Flames Using Explicit Coupling of the Energy Equation with the FGM Database

This paper provides a numerical study on n-dodecane flames using Large-Eddy Simulations (LES) along with the Flamelet Generated Manifold (FGM) method for combustion modeling. The computational setup follows the Engine Combustion Network Spray A operating condition, which consists of a single-hole spray injection into a constant volume vessel. Herein we propose a novel approach for the coupling of the energy equation with the FGM database for spray combustion simulations. Namely, the energy equation is solved in terms of the sensible enthalpy, while the heat of combustion is calculated from the FGM database. This approach decreases the computational cost of the simulation because it does not require a precise computation of the entire composition of the mixture. The flamelet database is generated by simulating a series of counterflow diffusion flames with two popular chemical kinetics mechanisms for n-dodecane. Further, the secondary breakup of the droplet is taken into account by a recently developed modified version of the Taylor Analogy Breakup model. The numerical results show that the proposed methodology captures accurately the main characteristics of the reacting spray, such as mixture formation, ignition delay time, and flame lift-off. Additionally, it captures the “cool flame" between the flame lift-off and the injection nozzle. Overall, the simulations show differences between the two kinetics mechanisms regarding the ignition characteristics, while similar flame structures are observed once the flame is stabilised at the lift-off distance.

     

A fluorescence anisotropy method for measuring protein concentration in complex cell culture media

The rapid, quantitative analysis of the complex cell culture media used in biopharmaceutical manufacturing is of critical importance. Requirements for cell culture media composition profiling, or changes in specific analyte concentrations (e.g. amino acids in the media or product protein in the bioprocess broth) often necessitate the use of complicated analytical methods and extensive sample handling. Rapid spectroscopic methods like multi-dimensional fluorescence (MDF) spectroscopy have been successfully applied for the routine determination of compositional changes in cell culture media and bioprocess broths. Quantifying macromolecules in cell culture media is a specific challenge as there is a need to implement measurements rapidly on the prepared media. However, the use of standard fluorescence spectroscopy is complicated by the emission overlap from many media components. Here, we demonstrate how combining anisotropy measurements with standard total synchronous fluorescence spectroscopy (TSFS) provides a rapid, accurate quantitation method for cell culture media. Anisotropy provides emission resolution between large and small fluorophores while TSFS provides a robust measurement space. Model cell culture media was prepared using yeastolate (2.5 mg mL^–1) spiked with bovine serum albumin (0 to 5 mg mL^–1). Using this method, protein emission is clearly discriminated from background yeastolate emission, allowing for accurate bovine serum albumin (BSA) quantification over a 0.1 to 4.0 mg mL^–1range with a limit of detection (LOD) of 13.8 μg mL^–1.     

Structural Diversity of Metallosupramolecular Assemblies from Cu(phen)2+ (phen = 1,10‐Phenanthroline) Building Blocks and 4,4′‐Bipyridine

Attempts to crystal engineer metallosupramolecularcomplexes from Cu(phen)²⁺ building blocks and the prototypical,rod‐like, exo‐bidentate ligand 4,4′‐bipyridine (4,4′‐bipy) by layering techniques are described. Reactions of Cu(phen)²⁺ (phen = 1,10‐phenanthroline) with 4,4′‐bipy in the presence of NO₃^– counterions yielded two distinct, discrete, dinuclear, C_i symmetric, dumbbell‐typecomplexes, [{Cu(NO₃)₂(phen)}₂(4,4′‐bipy)] ( 1 ) and [{Cu(NO₃)(phen)(H₂O)}₂(4,4′‐bipy)](NO₃)₂ ( 2 ), depending upon the mixture of solvents used for crystallization. In compound 1 , a mono‐ and a bidentate nitrato group coordinate to Cu²⁺, whereas in 2 the monodentate nitrato groups are replaced by aqua ligands, which introduce additional hydrogen‐bond donor functionality to the molecule. The crystal structure of 1 was determined by single‐crystal X‐ray analysis at 296 and 110 K. Upon cooling, a disorder‐order transition occurs, with retention of the space group symmetry. The crystal structure of 2 at room temperature was reported previously [Z.‐X. Du, J.‐X. Li, Acta Cryst. 2007 , E63, m2282]. We have redetermined the crystal structure of 2 at 100 K. A phase transition is not observed for 2 , but the low temperature single‐crystal structure determination is of significantly higher precision than the room temperature study. Both 1 and 2 are obtained phase‐pure, as proven by powder X‐ray diffraction of the bulk materials. Crystals of [Cu(phen)(CF₃SO₃)₂(4,4′‐bipy) · 0.5H₂O]_n ( 3 ), a one‐dimensional coordination polymer, were obtained from [Cu(CF₃SO₃)₂(phen)(H₂O)₂] and 4,4′‐bipy. In 3 , Cu(phen)²⁺ corner units are joined by 4,4′‐bipy via the two vacant cis sites to form polymeric zig‐zag chains, which are tightly packed in the crystal. Compounds 1 – 3 were further studied by infrared spectroscopy.     

The use of 1,2-dipiperidinoacetylene for the preparation of monometallic diaminoacetylene and homo- or heterobimetallic diaminodicarbene ruthenium(II) complexes

The reaction of the ynediamine 1,2-dipiperidinoacetylene (1) with [(η(2)-COE)Cr(CO)(5)], [(THF)W(CO)(5)] and [RuCl(2)(η(6)-cymene)](2) afforded homobimetallic complexes 2a, 2b and 3, in which the diaminoacetylene 1 acts as a bis(aminocarbene) ligand by bridging two complex fragments Cr(CO)(5) (in 2a), W(CO)(5) (in 2b) and RuCl(2)(η(6)-cymene) (in 3). The reaction of 1 with [RuCl(2)(PPh(3))(3)] gave trans-[(1)RuCl(PPh(3))(2)]Cl, [4]Cl, in which the alkyne 1 coordinates as a 4-electron donor ligand. The cation 4 represents a rare example of a square-planar Ru(II) complex with a low-spin ground state (S = 0), and its stability can be ascribed to the strong alkyne-metal π-interaction as confirmed by DFT calculations. Treatment with one or two equivalents of NaBPh(4) in acetonitrile gave [4]BPh(4) and the dicationic [(1)Ru(PPh(3))(2)(CH(3)CN)(2)](BPh(4))(2), [5](BPh(4))(2). [4]Cl can be used for the preparation of heterobimetallic Ru-Pd bis(aminocarbene) complexes by reaction with [(MeCN)(2)PdCl(2)], resulting in the formation of bimetallic 6 and tetrametallic 7.     

Residual reduction algorithms for nonsymmetric saddle point problems

In this paper, we introduce and analyze Uzawa algorithms for non-symmetric saddle point systems. Convergence for the algorithms is established based on new spectral results about Schur complements. A new Uzawa type algorithm with optimal relaxation parameters at each new iteration is introduced and analyzed in a general framework. Numerical results supporting the efficiency of the algorithms are presented for finite element discretization of steady state Navier-Stokes equations.     

Valence isoelectronic substitution in the B8(-) and B9(-) molecular wheels by an Al dopant atom: umbrella-like structures of AlB7(-) and AlB8(-)

The structures and the electronic properties of two aluminum-doped boron clusters, AlB(7)(-) and AlB(8)(-), were investigated using photoelectron spectroscopy and ab initio calculations. The photoelectron spectra of AlB(7)(-) and AlB(8)(-) are both broad, suggesting significant geometry changes between the ground states of the anions and the neutrals. Unbiased global minimum searches were carried out and the calculated vertical electron detachment energies were used to compare with the experimental data. We found that the Al atom does not simply replace a B atom in the parent B(8)(-) and B(9)(-) planar clusters in AlB(7)(-) and AlB(8)(-). Instead, the global minima of the two doped-clusters are of umbrella shapes, featuring an Al atom interacting ionically with a hexagonal and heptagonal pyramidal B(7) (C(6v)) and B(8) (C(7v)) fragment, respectively. These unique umbrella-type structures are understood on the basis of the special stability of the quasi-planar B(7)(3-) and planar B(8)(2-) molecular wheels derived from double aromaticity.     

Comparison of luminescence ADP production assay and radiometric scintillation proximity assay for Cdc7 kinase

Several assay technologies have been successfully adapted and used in HTS to screen for protein kinase inhibitors; however, emerging comparative analysis studies report very low hit overlap between the different technologies, which challenges the working assumption that hit identification is not dependent on the assay method of choice. To help address this issue, we performed two screens on the cancer target, Cdc7-Dbf4 heterodimeric protein kinase, using a direct assay detection method measuring [(33)P]-phosphate incorporation into the substrate and an indirect method measuring residual ADP production using luminescence. We conducted the two screens under similar conditions, where in one, we measured [(33)P]-phosphate incorporation using scintillation proximity assay (SPA), and in the other, we detected luminescence signal of the ATP-dependent luciferase after regenerating ATP from residual ADP (LUM). Surprisingly, little or no correlation were observed between the positives identified by the two methods; at a threshold of 30% inhibition, 25 positives were identified in the LUM screen whereas the SPA screen only identified two positives, Tannic acid and Gentian violet, with Tannic acid being common to both. We tested 20 out of the 25 positive compounds in secondary confirmatory study and confirmed 12 compounds including Tannic acid as Cdc7-Dbf4 kinase inhibitors. Gentian violet, which was only positive in the SPA screen, inhibited luminescence detection and categorized as a false positive. This report demonstrates the strong impact in detection format on the success of a screening campaign and the importance of carefully designed confirmatory assays to eliminate those compounds that target the detection part of the assay.     

Inviscid Models Generalizing the Two-dimensional Euler and the Surface Quasi-geostrophic Equations

Any classical solution of the two-dimensional incompressible Euler equation is global in time. However, it remains an outstanding open problem whether classical solutions of the surface quasi-geostrophic (SQG) equation preserve their regularity for all time. This paper studies solutions of a family of active scalar equations in which each component u _j of the velocity field u is determined by the scalar θ through \({u_j =\mathcal{R}\Lambda^{-1}P(\Lambda) \theta}\) , where \({\mathcal{R}}\) is a Riesz transform and Λ = (?Δ)^1/2. The two-dimensional Euler vorticity equation corresponds to the special case P(Λ) = I while the SQG equation corresponds to the case P(Λ) = Λ. We develop tools to bound \({\|\nabla u||_{L^\infty}}\) for a general class of operators P and establish the global regularity for the Loglog-Euler equation for which P(Λ) = (log(I + log(I ? Δ))) ^γ with 0 ≦ γ ≦ 1. In addition, a regularity criterion for the model corresponding to P(Λ) = Λ ^β with 0 ≦ β ≦ 1 is also obtained.     

Sensitivity Analysis for a Class of H 0 1 ${{H_{0}^{1}}}$ -Elliptic Variational Inequalities of the Second Kind

Set-Valued and Variational Analysis - We study the stability of solutions to ${H_{0}^{1}}$ -elliptic variational inequalities of the second kind that contain a non-differentiable Nemytskii...