Boc–Pro–Hyp–Gly–OBzl and Boc–Ala–Hyp–Gly–OBzl,two repeating triplets found in collagen

The protected tripeptides benzyl N‐{2‐[N‐(tert‐butoxy­carbon­yl)­prol­yl]‐4‐hydroxy­prol­yl}glycinate or Boc–Pro–Hyp–Gly–OBzl, C₂₄H₃₃N₃O₇, and benzyl N‐{2‐[N‐(tert‐butoxy­carbon­yl)­alan­yl]‐4‐hydroxy­prol­yl}glycinate or Boc–Ala–Hyp–Gly–OBzl, C₂₂H₃₁N₃O₇, are the minimum repeating triplets found in collagen. Within the crystal structure of each are two independent peptide mol­ecules with similar structures. The peptides are arranged anti­parallel to one another and inter­act through hydrogen bonds involving the main chains and the 4‐hydroxy­prolyl groups. The structures exhibit characteristics of a triple helix, but the peptides tend to assume a sheet‐like structure.     

Non–symmetrically p–nitrobenzyl–substituted N–heterocyclic carbene–silver(I) complexes as metallopharmaceutical agents

In the present work, a series of eight new imidazole, 4,5–dichloroimidazole, 4,5–diphenylimidazole and benzimidazole based nitro–functionalized mono–N –heterocyclic carbene (NHC)–silver(I) acetate ( 7a–d ) and bis–NHC–silver(I) hexafluorophosphate complexes ( 8a–d ) were synthesised by the reaction of the corresponding azolium hexafluorophosphate salts ( 6a–d ) with silver(I) acetate and silver(I) oxide in methanol and acetonitrile, respectively. All the synthesised compounds were fully characterized by various spectroscopic techniques and elemental analyses. Additionally, the structure of bis–(1–benzyl–3–(p –nitrobenzyl)–4,5–dichloroimidazole–2–ylidene)silver(I) hexafluorophosphate complex ( 8b ) was confirmed by single crystal X–ray diffraction analysis. Preliminary in vitro antibacterial evaluation was conducted for all the compounds ( 6a–d) , ( 7a–d) , and ( 8a–d) by Kirby–Bauer's disc diffusion method followed by the determination of Minimum Inhibitory Concentration (MIC) from broth macrodilution method against five standard bacteria; two Gram–positive bacterial strains (Staphylococcus aureus and Bacillus subtilis) and three Gram–negative bacterial strains ( Escherichia coli , Shigella sonnei, and Salmonella typhi). All the hexafluorophosphate salts ( 6a – d) were found inactive against the tested bacterial strains and their corresponding mono– and bis–NHC–silver(I) complexes ( 7a–d and 8a–d ) exhibited moderate to high antibacterial activity with MIC value in the range 8–128 μg/mL. In addition, preliminary in vitro anticancer potential of all the silver(I) complexes ( 7a–d and 8a–d ) was determined against the human derived breast adenocarcinoma cells (MCF 7) by MTT assay. All the mono– and bis–NHC–silver(I) complexes ( 7a–d and 8a–d ) orchestrated high anticancer potential with IC₅₀ values ranging from 10.39 to 59.56 nM. In comparison, mono– NHC–silver(I) complexes performed better than the bis–NHC–silver(I) complexes.     

Conformational structure of the tetrapeptide Boc–Aib–Leu–Leu–Aib–OMe–the central fragment of the nonapeptide antibiotic leucinostatin A

The conformational structure of the tetrapeptide Boc–Aib–Leu–Leu–Aib–OMe has been investigated by the PCILO method. The computational results show the formation of two closed β-turns, both of which are of type III, and the peptide backbone folds into a right-handed 3₁₀-helical conformation stabilized by two intramolecular 4 → 1 hydrogen bonds. The helix thus formed generates a pore of ～3 Å along helix axis with hydrophobic amino acid side chains located on the outside of the helix, and this tendency of leucine side chains may enable leucinostatin A to fit into the membrane bilayer. The pore thus formed is cation-selective, and through this pore, the cation can pass only in a single file.     

Alkaline Earth Metal Ion Induced Coil–Helix–Coil Transition of Lysine–Coumarin–Azacrown Hybrid Foldamers with OFF–OFF–ON Fluorescence Switching

A new metal‐ion‐responsive and fluorescent foldamer, OPLM₈ , composed of eight lysine–coumarin–azacrown units, has been designed and synthesized. The flexible OPLM₈ can be forced into a well‐defined helix structure only upon the addition of alkaline earth metal ions. The structural change is based on the crown ether moieties being positioned in the requisite arrangement along the peptide chain, that is, at i, i+4 spacing, such that the alkaline earth metal ions can mediate the formation of four sandwich complexes between them. Moreover, varying the chelator‐to‐metal‐ion ratio from 2:1 to 1:1 resulted in disassembly of the sandwich complexes leading to collapse of the helical structure to a random coil. These metal‐ion‐induced structural transitions could not only be monitored by the CD amplitude change but also easily probed by unique “OFF–OFF–ON” fluorescence intensity changes from 0.7‐fold to 14‐fold as the structure changed from the folded helix to a random coil. To further verify that the helix formation was indeed induced by metal‐ion complexation, two kinds of control octamers with only four metal‐ion chelators on the side chains were studied. One, which was capable of forming two sandwich complexes between the i and i+4 residues, displayed a negative Cotton couplet with the magnitude of its A value close to half that of OPLM₈ , and the second had four metal‐ion chelators positioned in the same turn, and hence was incapable of forming intramolecular metal complexes and showed different induced CD signals. Collectively, the photospectroscopic data and the results of the control studies suggest that alkaline earth metal ions can efficiently promote the flexible octamer OPLM₈ into a well‐organized helix by the formation of sandwich complexes between substituents at an i, i+4 spacing.     

Synthesis,Crystal Structure,and Ultraviolet–Visible Spectrum of 8–Substituted–10,10–Dimethyl–10H–pyrido[1,2–a]indolium Perchlorates–Containing Thienyl Moiety

Two novel compounds, 8–[2–(2–thienyl)vinyl]–10,10–dimethyl–10H–pyrido[1,2–a] indolium perchlorate ( 3a ) and 8–[2–(5–phenyl–2–thienyl)vinyl]–10,10–dimethyl–10H–pyrido[1,2–a]indolium perchlorate ( 3b ) were synthesized and characterized by IR, ¹H–NMR, elemental analyses, and X–ray diffraction. Crystal structural analysis suggested that either 3a or 3b exhibited good coplanarity and rings and vinyl in the target molecule could make up a large conjugated system. Ultraviolet–visible absorption analysis indicated both 3a and 3b possessed large maximum absorptions, and 3b underwent a significant redshift (43.0 nm) in comparison with 3a .     

Calcium–Rhodium–Hydride –- Synthese und Struktur

Calcium Rhodium Hydrides –- Synthesis and Structure The two ternary hydrides Ca₈Rh₅H₂₃ and Ca₈Rh₆H₂₄ can be synthesised by reacting calcium hydride with rhodium in a hydrogen atmosphere. X-ray investigations on powder samples and elastic neutron diffraction experiments on the deuterated compounds led to the complete structures. Both hydrides crystallise in cubic structure types representing a transition from the K₂PtCl₆ type to the perovskit type structure. The rhodium deuterium bond lengths and the atomic volume of deuterium were discussed.     

Coulomb-Hole–Hartree–Fock functional

We have extended to molecules a density functional previously parametrized for atomic computations. The Coulomb-hole–Hartree–Fock functional, introduced by Clementi in 1963, estimates the dynamical correlation energy by the computations of a Hartree–Fock-type single-determinant wave function, where the Hartree–Fock potential was augmented with an effective potential term, related to a hard Coulomb hole enclosing each electron. The method was later revisited by S. Chakravorty and E. Clementi [Phys. Rev. A 39 , 2290 (1989)], where a Yukawa-type soft Coulomb hole replaced the previous hard hole; atomic correlation energies, computed for atoms with Z = 2 to Z = 54 as well as for a number of excited states, validated the method. In this article, we parametrized a function, which controls the width of the soft Coulomb hole, by fitting the first and second atomic ionization potentials of the atoms with 1 ? Z ? 18. The parametrization has been preliminarily validated by computing the dissociation energy for a number of molecules. A few-determinant version of the Coulomb-hole–Hartree–Fock method, necessary to account for the nondynamic correlation corrections, is briefly discussed. © 1994 John Wiley & Sons, Inc.     

Metastable liquid–liquid and solid–liquid phase boundaries in polymer–solvent–nonsolvent systems

In general liquid–liquid demixing processes are responsible for the porous morphology of membranes obtained by immersion precipitation. For rapidly crystallizing polymers, solid–liquid demixing processes also generate porous morphologies. In this study, the interference of both phase transitions has been analyzed theoretically using the Flory–Huggins theory for ternary polymer solutions. It is demonstrated that four main thermodynamic and kinetic parameters are important for the structure formation in solution: the thermodynamic driving force for crystallization, the ratio of the molar volumes of the solvent and the nonsolvent, the polymer–solvent interaction parameter, and the rate of crystallization of the polymer compared to the rate of solvent-nonsolvent exchange. An analysis of the relevance of each of these parameters for the membrane morphology is presented. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 35: 763–770, 1997     

Poly(styrene–b–ethylene/butylene–b–styrene)/cobalt ferrite magnetic nanocomposites

Magnetic nanoparticles were created in or around the sulfonated (s) polystyrene domains in a poly[styrene–b–(ethylene–co–butylene)–b–styrene)] block copolymer (BCP) using an in situ inorganic precipitation procedure. The sBCP was neutralized with a mixed iron/cobalt chloride electrolyte, and the doped samples were converted to their oxides by reaction with sodium hydroxide. Transmission electron microscopy indicated the presence of nanoparticles having diameters of 20–50 nm. Metal oxide particle structures were studied using wide angle X–ray diffraction, which revealed that they were inverse spinel cobalt iron oxide crystals. Thermogravimetric analysis provided the weight percent of the inorganic component and nanocomposite thermal decomposition profile. Modulated differential scanning calorimetry studies suggested that the inorganic inclusions were selectively grown in the polystyrene hard block phase. These nanocomposites were shown, using alternating gradient magnetometry, to be ferrimagnetic at room temperature. © 2005 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 1475–1485, 2005     

Darstellung,Kristallstrukturen und Schwingungsspektren von Verbindungen mit den linearen Dipnictidoborat(3–)‐Anionen [P–B–P]3–, [As–B–As]3– und [P–B–As]3–

Synthesis, Crystal Structure, and Vibrational Spectra of Compounds with the Linear Dipnictidoborate (3–) Anions [P–B–P]^3–, [As–B–As]^3–, and [P–B–As]^3– The alkali metal boron compounds M₃[BX₂] with X = P, As are synthesized from the alkali metals M and the binary components MX or M₄X₆ and BX in sealed steel ampoules (phosphides) or niobium ampoules (arsenides) at 1000 K. The compounds are obtained as bright yellow prisms (M₃[BP₂]) or plates (K₂Na[BP₂]) and yellow‐red prismatic crystals (M₃[BAs₂], Cs₃[BPAs]) which are very sensitive against oxidation and hydrolysis. Three different structure types are formed, namely K₂Na[BP₂] (C2/m (No. 12); Z = 4; a new mC24 structure type); Na₃[BP₂] (P2₁/c (No. 14); Z = 4, β‐Li₃[BN₂] type), M₃[BX₂] with M = K, Rb, Cs and X = P, As and Cs₃[P–B–As] (C2/c, (No. 15); Z = 4, K₃[BP₂] type). The bond lengths of the linear [BX₂]^3– anions are hardly changed and correspond to a Pauling bond order PBO = 1.9 (d(B–P) = 176.7–177.1 pm; d(B–As) = 186.5–188.0 pm). The vibrational spectra confirm the existence of unmixed and mixed units [P–B–P]^3–, [As–B–As]^3– and [P–B–As]^3– with D_∞h and C_∞v symmetry, respectively. The valence force constants f(B–X) and the corresponding Siebert bond orders, calculated from the frequencies, are discussed and compared with those of the isoelectronic anions and molecules.     

Polydiphenylsiloxane–polydimethylsiloxane–polydiphenylsiloxane triblock copolymers

Polydiphenylsiloxane–polydimethylsiloxane–polydiphenylsiloxane triblock copolymers were prepared by two methods. The first approach was the sequential addition of the monomers. The anionic polymerization of hexamethylcyclotrisiloxane initiated by dilithio diphenylsilanolate gave α,ω‐bis(lithio dimethylsilanolate)polydimethylsiloxane, which was added to hexaphenylcyclotrisiloxane at ～120 °C to yield the desired triblock material. In the other, a convergent approach was used. Excess α‐vinyldimethylsiloxypolydiphenylsiloxane was coupled to α,ω‐bis(hydrido)polydimethylsiloxane by a Pt‐catalyzed hydrosilylation reaction to give the triblock material. The formation of distinct blocks with regular microstructures in these materials was confirmed by ¹H, ¹³C, and ²⁹Si NMR spectroscopy as well as differential scanning calorimetry. The molecular weights were determined by gel permeation chromatography, and the thermal stabilities were evaluated by thermogravimetric analysis. Dynamic mechanical analysis was used to confirm thermal transitions obtained by differential scanning calorimetry and to evaluate the mechanical properties of the materials. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 3629–3639, 2006     

1H and 13C NMR study of phosphopeptides: 2—Ac–PSer–Gly,Ala–PSer–Gly and Gly–PSer–Phe

¹H and ¹³C NMR spectra of AC–PSer–Gly, Ala–PSer–Gly and Gly–PSer–Phe have been measured and analysed as a function of pD. The NMR parameters of the PSeryl side chain are a function of the sequence. The second titration step of the phosphate group (pK₂ = 5.7) is much more difficult to detect in Ac–PSer–Gly and Ala–PSer–Gly than in Gly–PSer–Phe. The conformation in which H-α? C-α? C-β? O? P forms a planar W-type arrangement predominates only for Ala–PSer–Gly. In the other two phosphopeptides the gauche conformations contribute increasingly, in particular for Gly–PSer–Phe.     

Conformational energy calculation on the neurotensin c-terminal pentapeptide Arg–Pro–Tyr–Ile–Leu OH

The conformational behavior of the C-terminal neurotensin pentapeptide, Arg–Pro–Tyr–Ile–Leu OH [NT(9–13)], was investigated using empirical energy calculations. A special aim was to display the specific contribution of each residue to induce conformations able to interact with biological receptors. Restrictions were then introduced in intramolecular interactions involving the Arg side chain and the terminal COOH group. The stablest conformations include in the order of decreasing stability: a distorted helical form for the C-terminal tetrapeptide, a (Pro₂–Tyr₃) β turn I, an α helix, an extended form, and a (Tyr₂–Ile₃) β turn III, which are energetically rather close (ΔE < 3 kcal/mol). The NT(9–13) peptide appears then as a rather flexible molcule with a noteworthy ability of adaptation to a substrate. Extended forms would be in agreement with a zipper model of interactions with receptors, whereas folded forms involving helices and β, γ turns would support a lock and key model. The specific contribution of side chains, specially those of Tyr and Arg residues as well as the key position of the Pro residue emerge clearly from this study.     

Bright Solid‐State Emission of Disilane‐Bridged Donor–Acceptor–Donor and Acceptor–Donor–Acceptor Chromophores

The development of disilane‐bridged donor–acceptor–donor (D‐Si‐Si‐A‐Si‐Si‐D) and acceptor–donor–acceptor (A‐Si‐Si‐D‐Si‐Si‐A) compounds is described. Both types of compound showed strong emission (λ_em=ca. 500 and ca. 400 nm, respectively) in the solid state with high quantum yields (Φ: up to 0.85). Compound 4 exhibited aggregation‐induced emission enhancement in solution. X‐ray diffraction revealed that the crystal structures of 2 , 4 , and 12 had no intermolecular π–π interactions to suppress the nonradiative transition in the solid state.     

Structure–Property Relationships in Click‐Derived Donor–Triazole–Acceptor Materials

To shed light on intramolecular charge‐transfer phenomena in 1,2,3‐triazole‐linked materials, a series of 1,2,3‐triazole‐linked push–pull chromophores were prepared and studied experimentally and computationally. Investigated modifications include variation of donor and/or acceptor strength and linker moiety as well as regioisomers. Photophysical characterization of intramolecular charge‐transfer features revealed ambipolar behavior of the triazole linker, depending on the substitution position. Furthermore, non‐centrosymmetric materials were subjected to second‐harmonic generation measurements, which revealed the high nonlinear optical activity of this class of materials.