Simultaneous determination of δ15N and δ18O of N2O and δ13C of CH4 in nanomolar quantities from a single water sample

We have developed a rapid, sensitive, and automated analytical system to simultaneously determine the concentrations and stable isotopic compositions (δ¹⁵N, δ¹⁸O, and δ¹³C) of nanomolar quantities of nitrous oxide (N₂O) and methane (CH₄) in water, by combining continuous‐flow isotope‐ratio mass spectrometry and a helium‐sparging system to extract and purify the dissolved gases. Our system, which is composed of cold traps and a capillary gas chromatograph that use ultra‐pure helium as the carrier gas, achieves complete extraction of N₂O and CH₄ in a water sample and separation among N₂O, CH₄, and the other component gases. The flow path following exit from the gas chromatograph was periodically changed to pass the gases through the combustion furnace to convert CH₄ and the other hydrocarbons into CO₂, or to bypass the combustion furnace for the direct introduction of eluted N₂O into the mass spectrometer, for determining the stable isotopic compositions through monitoring the ions of m/z 44, 45, and 46 of CO and N₂O⁺. The analytical system can be operated automatically with sequential software programmed on a personal computer. Analytical precisions better than 0.2‰ and 0.3‰ and better than 1.4‰ and 2.6‰ were obtained for the δ¹⁵N and δ¹⁸O of N₂O, respectively, when more than 6.7 nmol and 0.2 nmol of N₂O, respectively, were injected. Simultaneously, analytical precisions better than 0.07‰ and 2.1‰ were obtained for the δ¹³C of CH₄ when more than 5.5 nmol and 0.02 nmol of CH₄, respectively, were injected. In this manner, we can simultaneously determine stable isotopic compositions of a 120 mL water sample with concentrations as low as 1.7 nmol/kg for N₂O and 0.2 nmol/kg for CH₄. Copyright © 2010 John Wiley & Sons, Ltd.     

Mammalian DNA δ15N exhibits 40‰ intramolecular variation and is unresponsive to dietary protein level

We report the first high‐precision characterization of molecular and intramolecular δ¹⁵N of nucleosides derived from mammalian DNA. The influence of dietary protein level on brain amino acids and deoxyribonucleosides was determined to investigate whether high protein turnover would alter amino acid ¹⁵ N or ¹³ C values. Pregnant guinea pig dams were fed control diets, or high or low levels of dietary protein throughout gestation, and all pups were fed control diets. The cerebellar DNA of offspring was extracted at 2 and 120 days of life, nucleosides isolated and δ¹⁵N and δ¹³C values characterized. Mean diet δ¹⁵N was 0.45 ± 0.33‰, compared with cerebellar whole tissue and DNA δ¹⁵N = +4.1 ± 0.7‰ and ?4.5 ± 0.4‰, respectively. Cerebellar deoxythymidine (dT), deoxycytidine (dC), deoxyadenosine (dA), and deoxyguanosine (dG) δ¹⁵N were +1.4 ± 0.4, –2.1 ± 0.9, –7.2 ± 0.3, and ?10.4 ± 0.5‰, respectively. There were no changes in amino acid or deoxyribonucleoside δ¹⁵N values due to dietary protein level. Using known metabolic relationships, we developed equations to calculate the intramolecular δ¹⁵N values originating from aspartate (asp) in purines (pur) or pyrimidines (pyr), glutamine (glu), and glycine (gly) to be δ¹⁵N_ASP‐PUR, δ¹⁵N_ASP‐PYR, δ¹⁵N_GLN, and δ¹⁵N_GLY +11.9 ± 2.3‰, +7.0 ± 2.0‰, –9.1 ± 2.4‰, and ?31.8 ± 8.9‰, respectively. A subset of twelve amino acids from food and brain had mean δ¹⁵N values of 4.3 ± 3.2‰ and 13.8 ± 3.1‰, respectively, and δ¹⁵N values for gly and asp were 12.6 ± 2.2‰ and 15.2 ± 0.8‰, respectively. A separate isotope tracer study detected no significant turnover of cerebellar DNA in the first six months of life. The large negative δ¹⁵N difference between gly and cerebellar purine N at the gly (7) position implies either that there is a major isotope effect during DNA synthesis, or that in utero gly has a different isotope ratio during rapid growth and metabolism from that in adult life. Our data show that cerebellar nucleoside intramolecular δ¹⁵N values vary over more than 40‰ and are not influenced by dietary protein level or age. Copyright © 2011 John Wiley & Sons, Ltd.     

Compound-Specific Isotope Analysis of Amino Acid Labeling with Stable Isotope Nitrogen (15N) in Higher Plants

Individual free amino acid δ¹⁵N values in plant tissue reflect the metabolic pathways involved in their biosynthesis and catabolism and could thus aid understanding of environmental stress and anthropogenic effects on plant metabolism. In this study, compound-specific nitrogen isotope analysis of amino acid by gas chromatography-combustion-isotope ratio mass spectrometry (GC-C-IRMS) was carried out to determine individual free amino acid δ¹⁵N values. High correlations were observed between the δ¹⁵N values obtained by GC-C-IRMS and elemental analyzer-isotope ratio mass spectrometry (EA-IRMS) determinations, and the mean precision measured was better than 1 ‰. Cation-exchange chromatography was employed to purify the sample, and the difference between prior to and following passage through the resin was within 1 ‰. The amino acid δ¹⁵N values of plant leave samples following incubation in ¹⁵N-nitrate at different time points were determined. A typical foliar free amino acid ¹⁵N-enrichment pattern was found, and glutamine was the most rapidly labeled amino acid; other amino acids derived from the GS-GOGAT cycle were also enriched. The pyruvate family amino acids were labeled less quickly followed by the aromatic amino acids. This study highlighted that amino acid metabolism pathways had a major effect on the δ¹⁵N values. With the known amino acid metabolism pathways and δ¹⁵N values determined by the presented method, the influence of various external factors on the metabolic cycling of amino acid can be understood well.

     

Nicotine,acetanilide and urea multi‐level 2H‐, 13C‐ and 15N‐abundance reference materials for continuous‐flow isotope ratio mass spectrometry

Accurate determinations of stable isotope ratios require a calibration using at least two reference materials with different isotopic compositions to anchor the isotopic scale and compensate for differences in machine slope. Ideally, the δ values of these reference materials should bracket the isotopic range of samples with unknown δ values. While the practice of analyzing two isotopically distinct reference materials is common for water (VSMOW‐SLAP) and carbonates (NBS 19 and L‐SVEC), the lack of widely available organic reference materials with distinct isotopic composition has hindered the practice when analyzing organic materials by elemental analysis/isotope ratio mass spectrometry (EA‐IRMS). At present only L‐glutamic acids USGS40 and USGS41 satisfy these requirements for δ¹³C and δ¹⁵N, with the limitation that L‐glutamic acid is not suitable for analysis by gas chromatography (GC). We describe the development and quality testing of (i) four nicotine laboratory reference materials for on‐line (i.e. continuous flow) hydrogen reductive gas chromatography‐isotope ratio mass‐spectrometry (GC‐IRMS), (ii) five nicotines for oxidative C, N gas chromatography‐combustion‐isotope ratio mass‐spectrometry (GC‐C‐IRMS, or GC‐IRMS), and (iii) also three acetanilide and three urea reference materials for on‐line oxidative EA‐IRMS for C and N. Isotopic off‐line calibration against international stable isotope measurement standards at Indiana University adhered to the ‘principle of identical treatment’. The new reference materials cover the following isotopic ranges: δ²H_nicotine ?162 to ?45‰, δ¹³C_nicotine ?30.05 to +7.72‰, δ¹⁵N_nicotine ?6.03 to +33.62‰; δ¹⁵N_acetanilide +1.18 to +40.57‰; δ¹³C_urea ?34.13 to +11.71‰, δ¹⁵N_urea +0.26 to +40.61‰ (recommended δ values refer to calibration with NBS 19, L‐SVEC, IAEA‐N‐1, and IAEA‐N‐2). Nicotines fill a gap as the first organic nitrogen stable isotope reference materials for GC‐IRMS that are available with different δ¹⁵N values. Comparative δ¹³C and δ¹⁵N on‐line EA‐IRMS data from 14 volunteering laboratories document the usefulness and reliability of acetanilides and ureas as EA‐IRMS reference materials. Published in 2009 by John Wiley & Sons, Ltd.     

Carbon-13 NMR spectra of a series of para-substituted N,N-dimethylbenzamides. Comparisons of linear free energy relationships for carbon-13 and nitrogen-15 chemical shifts and rotation barriers

All carbon-13 chemical shifts for 11 para-substituted N,N-dimethylbenzamides in 1 mole % chloroform solution are reported, with assignments based upon double resonance experiments, analogy to chemical shifts of benzamide, and self-consistency between experimental and calculated values using recognized substituent parameters. In contrast to earlier reports, the aryl carbon chemical shift assignments for N,N-dimethylbenzamide are C-2, 127.0; C-3, 128.7; C-4, 129.4, and for p-chloro-N,N-dimethylbenzamide are C-1, 134.6; C-4, 135.5 ppm, relative to internal TMS. Good Hammett correlations (σ_p) are reported for ¹³C chemical shifts of C-1 (σ = 11.9 ppm) and even for the carbonyl group (σ = ?2.3 ppm) but are markedly improved if correlated with σ_p+ (σ = 9.5 ppm) and Dewar's F (σ = ?1.9 ppm), respectively. Excellent Swain–Lupton F and R correlations were found for some of the ¹³C chemical shifts and yielded values for percent resonance contributions to transmission of substituent effects as follows, C-1, 75 ± 4%; C-2, 51 ± 3%; C?O, 31±2%. These are compared to similar values calculated from the C?O of benzoic acids of 34±10%, and from the nitrogen-15 chemical shifts of benzamides of 56±2%. Correlations of these ¹³C δ values and ¹⁵N δ values with rotation barriers (ΔG) for N,N-dimethylbenzamides were examined, and it was found that while C?O δ values correlated only poorly the C-1 δ values correlated very well, but the best correlation was for ¹⁵N δ values of benzamides. It is suggested that Δ G and δ ¹⁵N are intrinsically related due to their numerical correlation, and the close similarity in percent resonance contribution of substituent influence on these parameters.     

Coupled N,C and S stable isotope measurements using a dual‐column gas chromatography system

Many laboratories routinely analyze plant, animal and soil samples with elemental analyzers coupled to isotope ratio mass spectrometers, obtaining rapid results for nitrogen (%N, δ¹⁵N) and carbon (%C, δ¹³C) from the same sample. The coupled N and C measurements are possible because of a gas chromatography (GC) separation of N₂ and CO₂ gases produced in elemental analysis. Adding a second GC column allows additional measurement of sulfur (%S, δ³⁴S) from the same sample, so that combined N, C and S information is obtained routinely. Samples are 1–15 mg, and replicates generally differ by less than 0.1‰ for δ¹⁵N, δ¹³C or δ³⁴S. An example application shows that the N, C, and S measurement system allows a three‐dimensional view of element dynamics in estuarine systems that are undergoing pollution inputs from upstream watersheds. Extension of these GC principles should allow coupled H, C, N, and S isotope measurements in future work. Copyright © 2007 John Wiley & Sons, Ltd.     

Measurement of Nitrogen and Nitrogen Isotopic Ratios Using Reduction Pyrolysis Coupled with Mass Spectrometry

Abstract

An analytical system for measuring total nitrogen and its isotopic abundance in a variety of environmental samples has been developed. A reductive pyrolysis system and a directional focusing 6-inch gas mass spectrometer were combined into the analytical system. In the reductive part of the system, nitrogen species are converted to ammonia with an atmosphere of hydrogen in the presence of a heated nickel catalyst. Five percent of the gas stream is split away for measuring total nitrogen by a conductivity detector. The ammonia is removed from the gas stream employing a cold finger reaction vessel.

The hydrogen-free ammonia is decomposed thermally to nitrogen and hydrogen at 1000°C, employing a hot rhenium filament. The N₂ produced from the decomposition is used for measuring the abundance of masses 28 and 29 by mass spectrometry. From this ratio, the ¹⁵N atom fraction is calculated.

Standard samples of N₂, ammonia, orchard leaves and urea have been successfully analyzed to determine isotopic compositions. Samples containing as little as 20 μg of total nitrogen can be analyzed by this system. By the addition of multi-reaction vessels, three samples may be completed per hour.     

Simultaneous δ15N, δ13C and δ34S measurements of low‐biomass samples using a technically advanced high sensitivity elemental analyzer connected to an isotope ratio mass spectrometer

Conventional simultaneous CNS stable isotope abundance measurements of solid samples usually require high sample amounts, up to 1 mg carbon, to achieve exact analytical results. This rarely used application is often impaired by high C:S element ratios when organic samples are analyzed and problems such as incomplete conversion into sulphur dioxide occur during analysis. We introduce, as a technical innovation, a high sensitivity elemental analyzer coupled to a conventional isotope ratio mass spectrometer, with which CNS‐stable isotope ratios can be determined simultaneously in samples with low carbon content (<40 µg C corresponding to ～100 µg dry weight). The system includes downsized reactors, a temperature program‐controlled gas chromatography (GC) column and a cryogenic trap to collect small amounts of sulphur dioxide. This modified application allows for highly sensitive measurements in a fully automated operation with standard deviations better than ±0.47‰ for δ¹⁵N and δ³⁴S and ±0.12‰ for δ¹³C (n = 127). Samples collected from one sampling site in a Baltic fjord within a short time period were measured with the new system to get a first impression of triple stable isotope signatures. The results confirm the potential of using δ³⁴S as a stable isotope tracer in combination with δ¹⁵N and δ¹³C measurements to improve discrimination of food sources in aquatic food webs. Copyright © 2009 John Wiley & Sons, Ltd.     

Analyse isotopique de l'azote par spectrometrie optique,pour de faibles teneurs en 15n

For mixtures of ¹⁴N₂ and ¹⁴N¹⁵N low in ¹⁵N (isotopic abundances less than 2%), previous optical spectrometric methods do not produce rapid results of sufficient precision. In this paper, operating conditions are described for the determination of the isotopic content to ±3% near the natural abundance and to ±1% when the sample contains an atom ratio of ¹⁵N: ¹⁴N of 1.5:100. The time required for a determination is ca. 10 min. A spectrometer is modified by the substitution of an exit slit and a photomultiplier in place of a photographic plate. The excitation of the electrodeless discharge tube is made by a high-frequency field. The method has been applied to samples of ammonium salts, fertilisers and plant material. In all cases, the precision of the isotopic measurements was greater than that required for most agricultural studies (5–6%).     

A new isolation procedure of nitrate from freshwater for nitrogen and oxygen isotope analysis

The nitrogen (δ¹⁵N) and oxygen isotope (δ¹⁸O) analysis of nitrate (NO₃^–) from aqueous samples can be used to determine nitrate sources and to study N transformation processes. For these purposes, several methods have been developed; however, none of them allows an accurate, fast and inexpensive analysis. Here, we present a new simple method for the isolation of nitrate, which is based on the different solubilities of inorganic salts in an acetone/hexane/water mixture. In this solvent, all major nitrate salts are soluble, whereas all other oxygen‐bearing compounds such as most inorganic carbonates, sulfates, and phosphates are not. Nitrate is first concentrated by freeze‐drying, dissolved in the ternary solvent and separated from insoluble compounds by centrifugation. Anhydrous barium nitrate is then precipitated in the supernatant solution by adding barium iodide. For δ¹⁸O analysis, dried Ba(NO₃)₂ samples are directly reduced in a high‐temperature conversion system to CO and measured on‐line using isotope ratio mass spectrometry (IRMS). For δ¹⁵N analysis, samples are combusted in an elemental analyzer (EA) coupled to an IRMS system. The method has been tested down to 20 µmol NO₃^– with a reproducibility (1SD) of 0.1‰ for nitrogen and 0.2–0.4‰ for oxygen isotopes. For nitrogen we observed a small consistent ¹⁵N enrichment of +0.2‰, probably due to an incomplete precipitation process and, for oxygen, a correction for the incorporation of water in the precipitated Ba(NO₃)₂ has to be applied. Apart from being robust, this method is highly efficient and low in cost. Copyright © 2011 John Wiley & Sons, Ltd.     

Essential methodological improvements in the oxygen isotope ratio analysis of N‐containing organic compounds

The quantitative conversion of organically bound oxygen into CO, a prerequisite for the ¹⁸O/¹⁶O analysis of organic compounds, is generally performed by high‐temperature conversion in the presence of carbon at ～1450°C. Since this high‐temperature procedure demands complicated and expensive equipment, a lower temperature method that could be utilized on standard elemental analyzers was evaluated. By substituting glassy carbon with carbon black, the conversion temperature could be reduced to 1170°C. However, regardless of the temperature, N‐containing compounds yielded incorrect results, despite quantitative conversion of the bound oxygen into CO. We believe that the problems were partially caused by interfering gases produced by a secondary decomposition of N‐ and C‐containing polymers formed during the decomposition of the analyte. In order to overcome the interference, we replaced the gas chromatographic (GC) separation of CO and N₂ by reversible CO adsorption, yielding the possibility of collecting and purifying the CO more efficiently. After CO collection, the interfering gases were vented by means of a specific stream diverter, thus preventing them from entering the trap and the mass spectrometer. Simultaneously, a make‐up He flow was used to purge the gas‐specific trap before the desorption of the CO and its subsequent mass spectrometric analysis. Furthermore, the formation of interfering gases was reduced by the use of polyethylene as an additive for analytes with a N:O ratio greater than 1. These methodological modifications to the thermal conversion of N‐containing analytes, depending on their structure or O:N ratio, led to satisfactory results and showed that it was possible to optimize the conditions for their individual oxygen isotope ratio analysis, even at 1170°C. With these methodological modifications, correct and precise δ¹⁸O results were obtained on N‐containing analytes even at 1170°C. Differences from the expected standard values were below ±1‰ with standard deviations of the analysis <0.2‰. Copyright © 2010 John Wiley & Sons, Ltd.     

Practical recommendations for the reduction of memory effects in compound-specific 15N/14N-ratio analysis of enriched amino acids by gas chromatography/combustion/isotope ratio mass spectrometry

Gas chromatography/combustion/isotope ratio mass spectrometry (GC-C-IRMS) is a highly sensitive approach which allows the analysis of the (13)C/(12)C and (15)N/(14)N isotope composition of amino acids in the range of natural abundance or in slightly (13)C- and (15)N-enriched samples. However, the accuracy of measurements remains a permanent challenge. Here we show the effect of the presence of slightly (15)N-enriched compounds in physiological samples on the accuracy and reproducibility of (15)N-abundances of amino acids within or between analytical runs. We spiked several individual amino acids with the respective (15)N-labelled isotopomer and measured the (15)N/(14)N ratios of other amino acids in the same sample or in the following analytical runs. Intra- and inter-run memory effects can be observed in (15)N/(14)N ratios of amino acids. Sample throughput is reduced when cleaning runs using standard mixtures are required to restore initial conditions after runs of samples with (15)N-enriched analytes. Possible reasons for the observed phenomenon and its implications for work in the lower (15)N-enrichment range (<0.5 APE) are discussed and include different aspects of gas chromatography, derivatisation, and hot catalytic metal surface effects. Results need to be interpreted with caution if complex physiological samples contain (15)N-enriched amino acids beyond 500‰ δ(15)N (~0.18 APE).     

Error assessment of nitrogen and oxygen isotope ratios of nitrate as determined via the bacterial denitrification method

Currently, bacterial denitrification is becoming the accepted method for δ¹⁵N‐ and δ¹⁸O‐NO determination. However, proper correction methods with international references (USGS32, USGS34 and USGS35) are needed. As a consequence, it is important to realize that the corrected isotope values are derived from a combination of several other measurements with associated uncertainties. Therefore, it is necessary to consider the propagated uncertainty on the final isotope value. This study demonstrates how to correctly estimate the uncertainty on corrected δ¹⁵N‐ and δ¹⁸O‐NO values using a first‐order Taylor series approximation. The bacterial denitrification method errors from 33 batches of 561 surface water samples varied from 0.2 to 2.1‰ for δ¹⁵N‐NO and from 0.7 to 2.3‰ for δ¹⁸O‐NO, which is slightly wider than the machine error, which varied from 0.2 to 0.6‰ for δ¹⁵N‐N₂O and from 0.4 to 1.0‰ for δ¹⁸O‐N₂O. The overall uncertainties, which are composed of the machine error and the method error, for the 33 batches ranged from 0.3 to 2.2‰ for δ¹⁵N‐NO and from 0.8 to 2.5‰ for δ¹⁸O‐NO. In addition, the mean corrected δ¹⁵N and δ¹⁸O values of 132 KNO₃‐IWS (internal working standard) measurements were computed as 8.4 ± 1.0‰ and 25.1 ± 2.0‰, which is a slight underestimation for δ¹⁵N and overestimation for δ¹⁸O compared with the accepted values (δ¹⁵N = 9.9 ± 0.3‰ and δ¹⁸O = 24.0 ± 0.3‰). The overall uncertainty of the bacterial denitrification method allows the use of this method for source identification of NO. Copyright © 2010 John Wiley & Sons, Ltd.     

Nitrogen-15 n.m.r. studies of 13C, 15N labeled arginine

¹⁵N n.m.r. spectra of [¹³C-2, 3-¹⁵N₂-guanidino]arginine and [¹³C, ¹⁵N₂] urea were obtained in D₂O and H₂O at a variety of pH values both with and without proton decoupling. The effects of the proton exchange rate are readily observable in the proton coupled ¹⁵N spectra. When the guanidino group is deprotonated (pK = 12.5), the terminal nitrogens give a single resonance 6.6 ppm downfield of the protonated species, indicating a rapid tautomeric exchange. The observed NH and CN couplings are compared with calculated values, and good agreement is found for ¹J(CN) using a Blizzard–Santry type calculation. The ramifications of the proton exchange on ¹⁵N n.m.r. spectra of amino acids and peptides are discussed.     

Determination of β-blockers in pharmaceutical preparations and human urine by high-performance liquid chromatography with tris(2,2′-bipyridyl)ruthenium(II) electrogenerated chemiluminescence detection

A highly selective and sensitive detection method based on tris(2,2′-bipyridyl)ruthenium(II) [Ru(bpy)₃²⁺] electrogenerated chemiluminescence (ECL) has been developed for the quantitative determination of β-blockers in both pharmaceutical preparations and human urine samples. The ECL emission is based on the reaction between electro-oxidized Ru(bpy)₃³⁺ and the secondary amino groups on the β-blockers. The ECL intensities for the β-blockers were strongly dependent on the pH at which the ECL detections were conducted, with the maximum intensities being obtained at pH 9.0. Under the optimal condition, the detection limit for atenolol and metoprolol were almost 0.5 μM (50 pmol) and 0.08 μM (8 pmol), respectively, with S/N of 3 and a linear working range that extends four orders of magnitude with relative standard deviations below 5% for 10 replicate injected samples. The concentrations of atenolol and metoprolol were determined in pharmaceutical preparations using flow injection analysis with Ru(bpy)₃²⁺ ECL detection based on standard addition method. The determined values by the present method showed acceptable agreement with the stated values by manufacturers. The determination of the five β-blockers in human urine samples was performed using HPLC-Ru(bpy)₃²⁺ ECL detection. The resulting chromatogram was much simpler than that obtained with HPLC-UV absorbance detection.     

Mikrobestimmung von Kohlenstoff und Wasserstoff,sowie von 14C,Tritium und Deuterium im Stickstoffstrom

A microanalytical method for the determination of carbon and hydrogen is described. The procedure involves the combustion of the organic substance in a stream of nitrogen and the oxidation of the decomposition products with oxygen. Halogens and sulphur are absorbed by the combustion catalyst (according to Körbl), whereas nitrogen oxides are reduced on a copper surface. The combustion products, CO₂ and H₂O are determined gravimetrically; in the case of radioactive samples they are appropriately absorbed and counted in a liquid scintillation counter. Strongly quenching singly and doubly labelled samples, which cannot be accurately counted even by modification of the counting device, give equally high radioactive yields (75% for ¹⁴C, 30% for ³H), since counting is not influenced by other gaseous impurities. Deuterium is quantitatively determined by measuring the intensity of the OD-signal at 2500 cm^?1 with an infrared spectrometer.     

Characterization of N‐methylated amino acids by GC‐MS after ethyl chloroformate derivatization

Methylation is an essential metabolic process in the biological systems, and it is significant for several biological reactions in living organisms. Methylated compounds are known to be involved in most of the bodily functions, and some of them serve as biomarkers. Theoretically, all α‐amino acids can be methylated, and it is possible to encounter them in most animal/plant samples. But the analytical data, especially the mass spectral data, are available only for a few of the methylated amino acids. Thus, it is essential to generate mass spectral data and to develop mass spectrometry methods for the identification of all possible methylated amino acids for future metabolomic studies. In this study, all N‐methyl and N,N‐dimethyl amino acids were synthesized by the methylation of α‐amino acids and characterized by a GC‐MS method. The methylated amino acids were derivatized with ethyl chloroformate and analyzed by GC‐MS under EI and methane/CI conditions. The EI mass spectra of ethyl chloroformate derivatives of N‐methyl ( 1–18 ) and N,N‐dimethyl amino acids ( 19–35 ) showed abundant [M‐COOC₂H₅]⁺ ions. The fragment ions due to loss of C₂H₄, CO₂, (CO₂ + C₂H₄) from [M‐COOC₂H₅]⁺ were of structure indicative for 1–18 . The EI spectra of 19–35 showed less number of fragment ions when compared with those of 1–18 . The side chain group (R) caused specific fragment ions characteristic to its structure. The methane/CI spectra of the studied compounds showed [M + H]⁺ ions to substantiate their molecular weights. The detected EI fragment ions were characteristic of the structure that made easy identification of the studied compounds, including isomeric/isobaric compounds. Fragmentation patterns of the studied compounds ( 1–35 ) were confirmed by high‐resolution mass spectra data and further substantiated by the data obtained from ¹³C₂‐labeled glycines and N‐ethoxycarbonyl methoxy esters. The method was applied to human plasma samples for the identification of amino acids and methylated amino acids. Copyright © 2016 John Wiley & Sons, Ltd.     

Isotopologue enrichment factors of N2O reduction in soils

Isotopic signatures can be used to study sink and source processes of N₂O, but the success of this approach is limited by insufficient knowledge on the isotope fractionation factors of the various reaction pathways. We investigated isotope enrichment factors of the N₂O‐to‐N₂ step of denitrification (ε) in two arable soils, a silt‐loam Haplic Luvisol and a sandy Gleyic Podzol. In addition to the ε of ¹⁸O (ε_18O) and of average ¹⁵N (ε_bulk), the ε of the ¹⁵N site preference within the linear N₂O molecule (ε_SP) was also determined. Soils were anaerobically incubated in gas‐tight bottles with N₂O added to the headspace to induce N₂O reduction. Pre‐treatment included the removal of NO to prevent N₂O production. Gas samples were collected regularly to determine the dynamics of N₂O reduction, the time course of the isotopic signatures of residual N₂O, and the associated isotope enrichment factors. To vary reduction rates and associated fractionation factors, several treatments were established including two levels of initial N₂O concentration and anaerobic pre‐incubation with or without addition of N₂O. N₂O reduction rates were affected by the soil type and initial N₂O concentration. The ε_18O and ε_bulk ranged between ?13 and ?20‰, and between ?5 and ?9‰, respectively. Both quantities were more negative in the Gleyic Podzol. The ε of the central N position (ε_α) was always larger than that of the peripheral N‐position (ε_β), giving ε_SP of ?4 to ?8‰. The ranges and variation patterns of ε were comparable with those from previous static incubation studies with soils. Moreover, we found a relatively constant ratio between ε_18O and ε_bulk which is close to the default ratio of 2.5 that had been previously suggested. The fact that different soils exhibited comparable ε under certain conditions suggests that these values could serve to identify N₂O reduction from the isotopic fingerprints of N₂O emitted from any soil. Copyright © 2009 John Wiley & Sons, Ltd.     

Position‐specific 13C/12C analysis of amino acid carboxyl groups – automated flow‐injection analysis based on reaction with ninhydrin

Rationale

The fundamental level of stable isotopic knowledge lies at specific atomic positions within molecules but existing methods of analysis require lengthy off‐line preparation to reveal this information. An automated position‐specific isotope analysis (PSIA) method is presented to determine the stable carbon isotopic compositions of the carboxyl groups of amino acids (δ¹³C_CARBOXYL values). This automation makes PSIA measurements easier and routine.

Methods

An existing high‐performance liquid chromatography (HPLC) gas handling interface/stable isotope ratio mass spectrometry system was modified by the addition of a post‐column derivatisation unit between the HPLC system and the interface. The post‐column reaction was optimised to yield CO₂ from the carboxyl groups of amino acids by reaction with ninhydrin.

Results

The methodology described produced δ¹³C_CARBOXYL values with typical standard deviations below ±0.1 ‰ and consistent differences (Δ¹³C_CARBOXYL values) between amino acids over a 1‐year period. First estimates are presented for the δ¹³C_CARBOXYL values of a number of internationally available amino acid reference materials.

Conclusions

The PSIA methodology described provides a further dimension to the stable isotopic characterisation of amino acids at a more detailed level than the bulk or averaged whole‐molecule level. When combined with on‐line chromatographic separation or off‐line fraction collection of protein hydrolysates the technique will offer an automated and routine way to study position‐specific carboxyl carbon isotope information for amino acids, enabling more refined isotopic studies of carbon uptake and metabolism.

     

Precise and accurate compound-specific carbon and nitrogen isotope analysis of RDX by GC-IRMS

A new analytical method is presented for the compound-specific carbon and nitrogen isotope ratio analysis of a thermo-labile nitramine explosive hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) by gas chromatograph coupled to an isotope ratio mass spectrometer (GC-IRMS). Two main approaches were used to minimise thermal decomposition of the compound during gas chromatographic separation: programmed temperature vaporisation (PTV) as an injection technique and a high-temperature ramp rate during the GC run. δ¹⁵N and δ¹³C values of RDX measured by GC-IRMS and elemental analyser (EA)-IRMS were in good agreement within a standard deviation of 0.3‰ and 0.4‰ for nitrogen and carbon, respectively. Application of the method for the isotope analysis of RDX during alkaline hydrolysis at 50°C revealed isotope fractionation factors ε _carbon?=??7.8‰ and ε _nitrogen?=??5.3‰.