Polynuclear Branched Tetrazole Systems. 2. New 2-(5-Tetrazolyl)ethylpodands and Their NH-Acidity

Nine new polynuclear 2-(5-tetrazolyl)ethyl podands have been obtained by the azidation of the corresponding nitriles. Using Bjerrum distribution functions, the values of pK _a ¹, pK _a ², pK _a ³, and pK _a ⁴ have been determined by a potentiometric method for 14 polynuclear tetrazoles in aqueous and aqueous methanolic solution. The found values lie in the range from 3.5 to 7.5 pH units. The overall rules and the sequence of the ionization of the spatially separated tetrazole fragments in these podand systems are discussed.     

Catalytic effect of supramolecular system based on cationic surfactant and monopodands in nucleophilic substitution of phosphorus esters

The data are presented on the synthesis of podands with terminal quinoxaline fragments of rings and their influence on both the micellization properties of cetyltrimethylammonium bromide in a water—DMF solution and kinetics of basic hydrolysis of O-p-nitrophenyl O-ethyl chloromethylphosphonate and O-p-nitrophenyl O-hexyl chloromethylphosphonate in the absence and presence of surfactants. The mechanism of the podand effect on the reaction rate depends on the structures of phosphonate and podand. 1,8-Bis(3-ethyl-1,2-dihydro-2-oxoquinoxalin-1-yl)-3,6-dioxaoctane inhibits the basic hydrolysis of the substrates to 3—4 times. In a micellar solution of the surfactant, an approximately 20-fold acceleration of the reaction rate constant is observed. The observed rate constant decreases when podand is added to a micellar solution. The catalytic effect of the polycomponent system is due to concentrating of the reactants. The micellar microenvironment can exert both positive and negative effects on the reactivity of phosphonates.     

N‐Alkyl Ammonium Resorcinarene Salts as High‐Affinity Tetravalent Chloride Receptors

N‐Alkyl ammonium resorcinarene salts (NARYs, Y=triflate, picrate, nitrate, trifluoroacetates and NARBr) as tetravalent receptors, are shown to have a strong affinity for chlorides. The high affinity for chlorides was confirmed from a multitude of exchange experiments in solution (NMR and UV/Vis), gas phase (mass spectrometry), and solid‐state (X‐ray crystallography). A new tetra‐iodide resorcinarene salt (NARI) was isolated and fully characterized from exchange experiments in the solid‐state. Competition experiments with a known monovalent bis‐urea receptor ( 5 ) with strong affinity for chloride, reveals these receptors to have a much higher affinity for the first two chlorides, a similar affinity as 5 for the third chloride, and lower affinity for the fourth chloride. The receptors affinity toward chloride follows the trend K₁?K₂?K₃≈ 5 >K₄, with K_a=5011 m ^?1 for 5 in 9:1 CDCl₃/[D₆]DMSO.     

Eu(fod)3 binding on the 1H‐NMR spectra of bis(2′‐ethylbenzoate)ethylene glycol podands

The complexing and selective binding constants of Eu(fod)₃ with bis(2′‐ethylbenzoate)ethylene glycol podands having one to four oxyethylene groups was observed on their ¹H‐NMR spectra at 250 MHz and 295 K in CDCl₃. The Eu(fod)₃ interaction displayed the selective binding role of oxygen on H₂C–O–CH₂ backbones with referring the ¹H chemical shifts. The estimated equilibrium constants, K_a, of 1:1 ratio of interactions were in accordance with the Eu(fod)₃ ionic radii to bind the oxygen sites depending on the size and conformation of the esters. Esters having one or two ethyleneoxy groups gave mainly 2:2 complexes using ester sites. The minimum lanthanide‐podand ester distance displayed the maximum stability so that ester with four oxyethylene groups was found to bind the Eu(fod)₃ moderately, whereas ester with three oxyethylene groups showed a large induced chemical shift due to the stability of Eu³⁺ complexes with larger ethyleneoxy groups. Copyright © 2012 John Wiley & Sons, Ltd.     

无溶剂法合成杯[4]芳烯星形化合物

以对苯二甲醛、乙酸酐为原料合成对苯二甲醛单缩醛, 接着与间苯二酚反应, 制备了含醛基杯[4]芳烯. 利用季戊四醇与含醛基杯[4]芳烯反应, 进而再与3-[4-(2,5-二氧杂环戊基)苯基]-9-[4-二(甲羰氧基)甲基苯基]-2,4,8,10-四氧杂螺环[5.5]十一烷反应, 合成了杯[4]芳烯星形化合物, 收率为65.2%. 产品结构经 IR, ¹H NMR, MS 和元素分析进行了表征.     

Synthesis, NMR, X-ray structural analyses and complexation studies of new Ag selective calix[4]arene based dipodal hosts—a co-complexation of neutral and charged species

New podands based on the p-tert-butylcalix[4]arene unit with substitution at the lower rim incorporating imine units, have been synthesized in high yield by simple condensation method. These podands have been shown to extract and transport Ag⁺ selectively over alkali, alkaline earth metal cations, Zn²⁺, Pb²⁺ and Hg²⁺ ions, from neutral aqueous phase to organic phase. In all the ligands the calix unit has been found to be present in a cone conformation except for the one having pyridine as end group, at the ortho position. It has been isolated in two conformations; cone and 1,2-alternate. To the best of our knowledge, this may be the first 1,3-lower rim substituted calix[4]arene to exist in a 1,2-alternate conformation and is among a few known compounds with this conformation in the general class of calix[4]arenes. A complex of this ligand, which happens to be the highest extractant of Ag⁺ has been isolated and characterized using mass, ¹H and ¹³C NMR spectroscopy's and elemental analysis. The spectroscopic evidence and molecular modelling studies performed on the complex suggest a participation of the imine and pyridine nitrogens and two of the ether oxygens in coordination to the metal ion. The X-ray crystal structures of three of the ligands establish the formation of inclusion complexes with polar acetonitrile solvent molecules. The ¹H and ¹³C NMR spectra of all the compounds, taken in CDCl₃, show the presence of acetonitrile molecules in the cavity of the calix[4]arene, indicating inclusion of the neutral guest molecules in the solution phase as well. For one of the podands X-ray crystal structure has shown a formation of clatharate complex of chloroform with the ligand which has rarely been found in the case of calix[4]arenes.     

Rim,Side Arms,and Cavity: Three Sites for the Recognition of Anions by Tetraazolium Resorcinarene Cavitands

Two tetrabenzoimidazolium‐resorcinarene cavitands were prepared and used for the recognition of chloride, bromide, iodide, cyanide, nitrate, perchlorate, hexanoate, benzenesulfonate, and p‐toluenesulfonate. Binding affinities of the two cavitands were determined by ¹H NMR titration and computational analysis. The observed spectral changes were related to specific interaction sites, which were supported by the computational studies. In the case of the C2?H tetrabenzoimidazolium‐resorcinarene, the recognition region of the inorganic anions and hexanoate was located at the rim of the cavitand, although chloride and bromide also interacted with the aromatic C?H bonds located between adjacent arms of the cavitand. By contrast, the recognition of the two anions with an aromatic ring (benzenesulfonate and p‐toluenesulfonate) results from encapsulation of the aromatic part of the anions inside the hydrophobic cavity of the host. In the case of the C2?Me tetrabenzoimizazolium‐resorcinarene receptor, the ability of the molecule to bind all inorganic anions and hexanoate was suppressed, but the receptor maintained its ability to strongly bind benzenesulfonate and p‐toluenesulfonate. This is interpreted in terms of suppression of the ability of the cavitand to form hydrogen bonds at the rim of the molecule due to replacement of the C2?H proton by a methyl group, while the hydrophobic pocket of the molecule maintains its binding abilities.     

Structures and conformational dynamics of gold(I) halide complexes of resorcinarene tetraphosphinite ligands

Gold(I) halide derivatives of several tetrakis(diphenylphosphinite) tetraester resorcinarene compounds have been prepared. The complexes are shown to exist in boat conformations, and two different boat conformations were characterized by X-ray structure determinations; the structural characterization of both boat conformations of the same parent resorcinarene is unprecedented. Intramolecular Au.Au interactions were observed in the solid state for both boat conformers and could cause twisting of the resorcinarene skeleton. Several of the complexes exist in solution as an equilibrium mixture of the two different boat conformers, and the equilibrium and dynamics of exchange were studied by variable-temperature NMR.     

Functionalization of the periphery of calix[4]resorcinarenes with P(III)-containing substituents via hydroxy,trimethylsiloxy, and ethoxy-tethered trimethylsiloxy intermediates

Unlike C-undecylcalix[4]resorcinarene, C-methylcalix[4]resorcinarene 1 reacted with chlorodifluorophosphine in the absence of an auxiliary base to give the unstable octakis(difluorophosphite)-substituted derivative 2. The existence of two conformational isomers of 2 in solution was observed by ¹⁹F and ³¹P NMR spectroscopy. Attempts to react the octakis(trimethylsilyl)calix[4]resorcinarene 3 and its tetrabromo derivative 4 with phosphorus trichloride and chlorodifluorophosphine were unsuccessful. The ethoxy-tethered C-methyl-octakis(trimeth-ylsilyl)calix[4]resorcinarene 5 was allowed to react with 2-chloro-1,3,5-trimethyl-1,3,5-triaza-2σ³λ³-phosphorin-4,6-dione and chlorodifluorophosphine. By substitution of all trimethylsilyl groups, the octakis(phosphorus(III))-substituted compounds 6 and 7 were formed. As for 2, dynamic behavior in solution was observed for 6 and 7, arising from the equilibrium between different conformational isomers. © 1998 John Wiley & Sons, Inc. Heteroatom Chem 9:553–558, 1998     

Cooperative Binding of Divalent Diamides by N‐Alkyl Ammonium Resorcinarene Chlorides

N‐Alkyl ammonium resorcinarene chlorides, stabilized by an intricate array of hydrogen bonds leading to a cavitand‐like structure, bind amides. The molecular recognition occurs through intermolecular hydrogen bonds between the carbonyl oxygen and the amide hydrogen of the guests and the cation–anion circular hydrogen‐bonded seam of the hosts, as well as through CH ??? π interactions. The N‐alkyl ammonium resorcinarene chlorides cooperatively bind a series of di‐acetamides of varying spacer lengths ranging from three to seven carbons. Titration data fit either a 1:1 or 2:1 binding isotherm depending on the spacer lengths. Considering all the guests possess similar binding motifs, the first binding constants were similar (K₁: 10² M ^?1) for each host. The second binding constant was found to depend on the upper rim substituent of the host and the spacer length of the guests, with the optimum binding observed with the six‐carbon spacer (K₂: 10³ M ^?2). Short spacer lengths increase steric hindrance, whereas longer spacer lengths increase flexibility thus reducing cooperativity. The host with the rigid cyclohexyl upper rim showed stronger binding than the host with flexible benzyl arms. The cooperative binding of these divalent guests was studied in solution through ¹H NMR titration studies and supplemented by diffusion‐ordered spectroscopy (DOSY), X‐ray crystallography, and mass spectrometry.     

Conformations of the ten-membered ring in 5,10-secosteroids I. X-ray and NMR. Analysis of (E)-3 β-hydroxy-5,10-seco-1(10)-cholesten-5-one esters

X-ray structure determination of the p-bromobenzoate 2b of one of the (E/Z)-isomeric 3β-hydroxy-5,10-seco-1(10)-cholesten-5-ones confirmed the (E)-configuration proposed previously and showed the cyclodecenone ring to adopt an extended crown conformation of type A ₁ (Fig. 9). Analysis of the ¹H- and ¹³C-NMR. spectra of acetate 2a revealed that in solution the ten-membered ring of this steroid exists in at least two distinct forms, the predominant (about 85%) corresponding to the solid-state conformation of 2b (= A ₁), and the minor most likely to B ₂ (Fig. 9). From NMR. data the energy difference between the two species and the relevant activation energy were estimated. A number of conformational force field calculations using a simplified partial structural model was performed; but the computed energy differences between the various possible conformations do not reproduce the effective situation, neither in solution nor in the crystal lattice, indicating that additional effects such as the transannular interaction of the double bond with the carbonyl group may strongly influence the thermodynamic stability of the system. The conformations deduced were used to rationalize the stereochemical course of different chemical reactions of 2a .     

Chiral complex-forming and trans-phase transfer agents. 7. Complex forming properties of podands based on 1,4∶3,6-dianhydro-D-mannitol

In their complexation with alkali metal picrates, podands prepared from l,43,6-dianhydro-D-mannitol display affinity to Na and Li cations but virtually do not bind K ions. It was shown using the¹H NMR method that these podands form complexes with -phenylethylammonium perchlorate, the composition and strength of which depends on the nature of the side-chains of the podand. The podands studied are not capable of participating in the enantioselective transfer of the chiral substrate from the aqueous phase into chloroform.For previous communication, see [1].Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 11, pp. 2501–2504, November, 1989.     

Studies of Silicon Podand Solvents

Three types of silicon podands, Me₂Si(OR)₂, EtSi(OR)₃ and PhSi(OR)₃, where R is a polyoxaethylene chain with different numbers of oxygen atoms (two, three or four), were obtained and studied by ¹H, ¹³C and ²⁹Si NMR methods. NMR spectra of ¹H, ⁷Li, ¹³C, ²³Na and ²⁹Si nuclei were also used for the study of lithium, sodium and rubidium complexes with the silicon podands. Theoretical calculations were performed using the PM3 hamiltonian. The heats of reactions between the compounds obtained and SbCl₅ were determined.     

Monohalocyclohexanes in liquid crystalline solution: the molecular behaviour of chloro- and iodo-cyclohexane

Dynamic ²H NMR spectroscopy is used to study selectively and perdeuteriated samples of chloro- and iodo-cyclohexane dissolved in a liquid crystalline solution. The equatorial and axial conformers are found to exist in a dynamic equilibrium with relative amounts of about p_e = 0.7 and p_a = 0.3, respectively, as taken from the ²H NMR lineshapes and 2D exchange spectra. The quantitative analysis of variable temperature ²H NMR spectra provides the kinetic parameters of the underlying ring inversion process. The activation enthalpies of this internal process are given by ΔH = 48.1 ± 1.0 and 40.6 ± 2.3 kJ mol^-1 for chloro- and iodocyclohexane, respectively. These values resemble those reported from earlier studies of isotropic solutions. The molecular order parameters, as well as the orientation of the main ordering axis, for the axial and equatorial conformers are determined as functions of temperature. These molecular quantities exhibit a strong dependence on the actual conformational state and size of the substituent, while polar effects of the substituents seem to play no important role.     

Conformations and complexation abilities of chemically modified cyclodextrins in aqueous solution

Circular dichroism spectral and fluorescence decay methods have been employed to determine the conformations of mono[6-(p-tolylseleno)-6-deoxy]-β-CD(1), mono(6-anilino-6-deoxy) −β -CD (2) and mono[6-(L-tryptophan)-6-deoxy]−β -CD (3) in phosphate buffer solution (pH 7.2, 0.1 mol dm⁻³) at 298.15 K. The results indicate that compounds 2 and 3 formed self-inclusion complexes in aqueous buffer solution, while the substituent of compound 1 was not included into cyclodextrin cavity at all. Furthermore, the complex stability constant (logK _s) and Gibbs free en-ergy change (−ΔAG °) of these three cylcodextrin derivatives with several cycloalkanols have been determined by circular dichroism spectral titration in phosphate buffer solution at 298.15 K. It is found that the location of the substituent affects the stability of host-guest complex in aqueous solution.     

Bis[(1,2-bis(2-(o-hydroxyphenoxy)ethyloxy)ethane)-(isothiocyanato)potassium] [K2(NCS)2(C18H22O6)2]: Crystal and Molecular Structure

Complex of podand 1,2-bis(2-(o-hydroxyphenoxy)ethyloxy)ethane (L) with potassium thiocyanate, [K₂(NCS)₂L₂] (I) was synthesized and studied using X-ray diffraction analysis: space group P , a = 7.771 Å, b = 11.711 Å, c = 11.965 Å, = 72.22°, = 79.21°, = 89.07°, Z = 1. Structure I was solved by direct method and anisotropically refined by the full-matrix least-squares method to R = 0.040 for all 4370 independent reflections (CAD4 autodiffractometer, MoK ). Structure I contains [K(NCS)L] monomers of the host–guest type united into centrosymmetrical [K₂(NCS)₂L₂] dimers via two bridging OH groups (one group from two L podands). In the monomer, the L podand appears as though to envelope the octacoordinated K⁺ cation, whose the coordination polyhedron is a strongly distorted hexagonal bipyramid with all six oxygen atoms of the L podand in its base and the N atom of the SCN^– ligand and the O atom of one of OH group of the neighboring (in dimer) L podand at its axial vertices. Molecules of I in crystal are joined through the O–H···N hydrogen bonds to form broad infinite chains along the x-axis.     

Conformations of the Nine‐Membered Ring in the B‐Nor‐5,10‐secosteroids. X‐Ray and NMR Analysis

The conformations of (Z)‐ and (E)‐5‐oxo‐B‐nor‐5,10‐secocholest‐1(10)‐en‐3β‐yl acetates ( 2 and 3 , resp.) were examined by a combination of X‐ray crystallographic analysis and NMR spectroscopy, with emphasis on the geometry of the cyclononenone moiety. The ¹H‐ and ¹³C‐NMR spectra showed that the unsaturated nine‐membered ring of (E)‐isomer 3 in C₆D₆ and (D₆)acetone solution exists in a sole conformation of type B ₁ , which is similar to its solid‐state conformation. The (Z)‐isomer 2 in C₆D₆, CDCl₃, and (D₆)acetone solution, however, exists in two conformational forms of different families, with different orientation of the carbonyl group, the predominant form (85%) corresponding to the conformation of type A ₁ and the minor (15%) to the conformation A ₂ present also in the crystalline state. In this solid‐state conformations of the nine‐membered ring of both compounds, the 19‐Me and 5‐oxo groups are ‘β’‐oriented. The NMR analysis suggests that the nine‐membered ring of 4 has a conformation of type C ₁ in CDCl₃ solution.     

Monitoring dendrimer conformational transition using 19F and 1H2O NMR

The conformational transition of a fluorinated amphiphilic dendrimer is monitored by the ¹H signal from water, alongside the ¹⁹F signal from the dendrimer. High-field NMR data (chemical shift δ, self-diffusion coefficient D, longitudinal relaxation rate R₁, and transverse relaxation rate R₂) for both dendrimer (¹⁹F) and water (¹H) match each other in detecting the conformational transition. Among all parameters for both nuclei, the water proton transverse-relaxation rate R₂(¹H₂O) displays the highest relative scale of change upon conformational transition of the dendrimer. Hydrogen/deuterium-exchange mass spectrometry reveals that the compact form of the dendrimer has slower proton exchange with water than the extended form. This result suggests that the sensitivity of R₂(¹H₂O) toward dendrimer conformation originates, at least partially, from the difference in proton exchange efficiency between different dendrimer conformations. Finally, we also demonstrated that this conformational transition could be conveniently monitored using a low-field benchtop NMR spectrometer via R₂(¹H₂O). The ¹H₂O signal thus offers a simple way to monitor structural changes of macromolecules using benchtop time-domain NMR.     

First-principles determination of molecular conformations of indolizidine (−)-235B′ in solution

Indolizidine (?)-235B′ is a particularly interesting natural product, as it is the currently known, most potent and subtype-selective open-channel blocker of the α4β2 nicotinic acetylcholine receptor (nAChR). In the current study, extensive first-principles electronic structure calculations have been carried out in order to determine the stable molecular conformations and their relative free energies of the protonated and deprotonated states of (?)-235B′ in the gas phase, in chloroform, and in aqueous solution. The ¹H and ¹³C NMR chemical shifts calculated using the computationally determined dominant molecular conformation of the deprotonated state are all consistent with available experimental NMR spectra of (?)-235B′ in chloroform, which suggests that the computationally determined molecular conformations are reasonable. Our computational results reveal for the first time that two geminal H atoms on carbon-3 (C3) of (?)-235B′ have remarkably different chemical shifts (i.e., 3.24 and 2.03 ppm). The computational results help one to better understand and analyze the experimental ¹H NMR spectra of (?)-235B′. The finding of remarkably different chemical shifts of two C3 geminal H atoms in a certain molecular conformation of (?)-235B′ may also be valuable in analysis of NMR spectra of other related ring-containing compounds. In addition, the pK _a of (?)-235B′ in aqueous solution is predicted to be ~9.7. All of the computational results provide a solid basis for future studies of the microscopic and phenomenological binding of various receptor proteins with the protonated and deprotonated structures of this unique open-channel blocker of α4β2 nAChRs. This computational study also demonstrates how one can appropriately use computational modeling and spectroscopic analysis to address the structural and spectroscopic problems that cannot be addressed by experiments alone.     

Studies of lithium and sodium complexation by silicon podand solvents

The complex formation of lithium and sodium ions with silicon podand solvents: phenyl-tris(1,4-dioxapentyl) silane (PhSi23) and ethyl-tris(1,4-dioxapentyl) silane (EtSi23) has been studied by FTIR, ¹H-, ¹³C-, ⁷Li- and ²³Na NMR. The far FTIR spectra show that the Li⁺ cations fluctuate very fast whereas Na⁺ cations are still localised between the oxygen atoms of the oxaalkyl chains. The ⁷Li NMR spectra prove that one Li⁺ cation can be coordinated not only by one but also two silicon podand molecules. The concentration dependence of the molar conductivity of LiClO₄ in the podand solvents indicates charge transfer between ion clusters.